RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
LCLAT1-201ENST00000309052 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
LCLAT1-201ENST00000309052 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
LCLAT1-201ENST00000309052 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
LCLAT1-201ENST00000309052 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
LCLAT1-201ENST00000309052 KIF21BO75037 1637 aa12.71□□□□□ -0.37
LCLAT1-201ENST00000309052 MRC2Q9UBG0 1479 aa12.71□□□□□ -0.38
LCLAT1-201ENST00000309052 TRIM52Q96A61 297 aa12.69□□□□□ -0.38
LCLAT1-201ENST00000309052 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
LCLAT1-201ENST00000309052 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
LCLAT1-201ENST00000309052 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
LCLAT1-201ENST00000309052 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
LCLAT1-201ENST00000309052 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
LCLAT1-201ENST00000309052 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
LCLAT1-201ENST00000309052 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
LCLAT1-201ENST00000309052 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
LCLAT1-201ENST00000309052 GRIN2BQ13224 1484 aa12.58□□□□□ -0.39
LCLAT1-201ENST00000309052 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.39
LCLAT1-201ENST00000309052 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
LCLAT1-201ENST00000309052 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
LCLAT1-201ENST00000309052 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
LCLAT1-201ENST00000309052 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
LCLAT1-201ENST00000309052 PLEKHD1A6NEE1 506 aa12.55□□□□□ -0.4
LCLAT1-201ENST00000309052 IFT140Q96RY7 1462 aa12.55□□□□□ -0.4
LCLAT1-201ENST00000309052 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
LCLAT1-201ENST00000309052 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
LCLAT1-201ENST00000309052 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
LCLAT1-201ENST00000309052 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
LCLAT1-201ENST00000309052 FOXD1Q16676 465 aa12.52□□□□□ -0.4
LCLAT1-201ENST00000309052 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
LCLAT1-201ENST00000309052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 10.6
LCLAT1-201ENST00000309052 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
LCLAT1-201ENST00000309052 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
LCLAT1-201ENST00000309052 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-201ENST00000309052 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
LCLAT1-201ENST00000309052 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
LCLAT1-201ENST00000309052 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
LCLAT1-201ENST00000309052 CDK13Q14004 1512 aaKnown RBP12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 PTPRGP23470 1445 aa12.43□□□□□ -0.42
LCLAT1-201ENST00000309052 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
LCLAT1-201ENST00000309052 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
LCLAT1-201ENST00000309052 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
LCLAT1-201ENST00000309052 TARBP1Q13395 1621 aaKnown RBP12.42□□□□□ -0.42
LCLAT1-201ENST00000309052 PCF11O94913 1555 aaKnown RBP12.42□□□□□ -0.42
LCLAT1-201ENST00000309052 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
LCLAT1-201ENST00000309052 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
LCLAT1-201ENST00000309052 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.43
LCLAT1-201ENST00000309052 CASKIN1Q8WXD9 1431 aa12.39□□□□□ -0.43
LCLAT1-201ENST00000309052 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
LCLAT1-201ENST00000309052 WDR62O43379 1518 aa12.38□□□□□ -0.43
LCLAT1-201ENST00000309052 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
LCLAT1-201ENST00000309052 CUL7Q14999 1698 aa12.38□□□□□ -0.43
LCLAT1-201ENST00000309052 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
LCLAT1-201ENST00000309052 IQGAP2Q13576 1575 aa12.38□□□□□ -0.43
LCLAT1-201ENST00000309052 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
LCLAT1-201ENST00000309052 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
LCLAT1-201ENST00000309052 KIAA0586Q9BVV6 1533 aa12.36□□□□□ -0.43
LCLAT1-201ENST00000309052 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
LCLAT1-201ENST00000309052 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
LCLAT1-201ENST00000309052 TIAM1Q13009 1591 aa12.35□□□□□ -0.43
LCLAT1-201ENST00000309052 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
LCLAT1-201ENST00000309052 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
LCLAT1-201ENST00000309052 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
LCLAT1-201ENST00000309052 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
LCLAT1-201ENST00000309052 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
LCLAT1-201ENST00000309052 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
LCLAT1-201ENST00000309052 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
LCLAT1-201ENST00000309052 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
LCLAT1-201ENST00000309052 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
LCLAT1-201ENST00000309052 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
LCLAT1-201ENST00000309052 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
LCLAT1-201ENST00000309052 EPRSP07814 1512 aaKnown RBP12.29□□□□□ -0.44
LCLAT1-201ENST00000309052 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
LCLAT1-201ENST00000309052 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
LCLAT1-201ENST00000309052 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
LCLAT1-201ENST00000309052 RRBP1Q9P2E9 1410 aaKnown RBP12.26□□□□□ -0.45
LCLAT1-201ENST00000309052 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
LCLAT1-201ENST00000309052 CCDC18Q5T9S5 1454 aa12.26□□□□□ -0.45
LCLAT1-201ENST00000309052 MIER1Q8N108 512 aa12.26□□□□□ -0.45
LCLAT1-201ENST00000309052 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
LCLAT1-201ENST00000309052 AFAP1Q8N556 730 aa12.25□□□□□ -0.45
LCLAT1-201ENST00000309052 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
LCLAT1-201ENST00000309052 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
LCLAT1-201ENST00000309052 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
LCLAT1-201ENST00000309052 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
LCLAT1-201ENST00000309052 PKD2Q13563 968 aa12.23□□□□□ -0.45
LCLAT1-201ENST00000309052 PTPRKQ15262 1439 aa12.23□□□□□ -0.45
LCLAT1-201ENST00000309052 SENP3-EIF4A1A0A087X0R7 540 aa12.22□□□□□ -0.45
LCLAT1-201ENST00000309052 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.45
LCLAT1-201ENST00000309052 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
LCLAT1-201ENST00000309052 MLECQ14165 292 aa12.19□□□□□ -0.46
LCLAT1-201ENST00000309052 GGT6Q6P531 493 aa12.19□□□□□ -0.46
LCLAT1-201ENST00000309052 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
LCLAT1-201ENST00000309052 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
LCLAT1-201ENST00000309052 NUP155O75694 1391 aa12.18□□□□□ -0.46
LCLAT1-201ENST00000309052 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms