RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 RIMBP3CA6NJZ7 1639 aa36.68■■■■□ 3.46
SNUPN-201ENST00000308588 RIMBP3BA6NNM3 1639 aa36.68■■■■□ 3.46
SNUPN-201ENST00000308588 RIMBP3Q9UFD9 1639 aa36.68■■■■□ 3.46
SNUPN-201ENST00000308588 SHROOM2Q13796 1616 aa36.64■■■■□ 3.46
SNUPN-201ENST00000308588 JPH4Q96JJ6 628 aa36.64■■■■□ 3.46
SNUPN-201ENST00000308588 KIF21BO75037 1637 aa36.55■■■■□ 3.44
SNUPN-201ENST00000308588 IQGAP2Q13576 1575 aa36.52■■■■□ 3.44
SNUPN-201ENST00000308588 ERCC6L2Q5T890 1561 aa36.52■■■■□ 3.44
SNUPN-201ENST00000308588 PRG4Q92954 1404 aaPredicted RBP36.51■■■■□ 3.44
SNUPN-201ENST00000308588 ARAP1Q96P48 1450 aa36.47■■■■□ 3.43
SNUPN-201ENST00000308588 CTTNBP2Q8WZ74 1663 aa36.46■■■■□ 3.43
SNUPN-201ENST00000308588 CYB5RLQ6IPT4 315 aa36.4■■■■□ 3.42
SNUPN-201ENST00000308588 EHMT2Q96KQ7 1210 aa36.37■■■■□ 3.41
SNUPN-201ENST00000308588 UGGT2Q9NYU1 1516 aa36.36■■■■□ 3.41
SNUPN-201ENST00000308588 GOLGA3Q08378 1498 aa36.36■■■■□ 3.41
SNUPN-201ENST00000308588 DISP1Q96F81 1524 aa36.29■■■■□ 3.4
SNUPN-201ENST00000308588 CARMIL2Q6F5E8 1435 aa36.28■■■■□ 3.4
SNUPN-201ENST00000308588 UBTFP17480 764 aaKnown RBP36.27■■■■□ 3.4
SNUPN-201ENST00000308588 KIAA0556O60303 1618 aa36.18■■■■□ 3.38
SNUPN-201ENST00000308588 TNIKQ9UKE5 1360 aa36.17■■■■□ 3.38
SNUPN-201ENST00000308588 PTPRGP23470 1445 aa36.12■■■■□ 3.37
SNUPN-201ENST00000308588 RANGAP1P46060 587 aaPredicted RBP36.09■■■■□ 3.37
SNUPN-201ENST00000308588 TTBK1Q5TCY1 1321 aaPredicted RBP36.07■■■■□ 3.36
SNUPN-201ENST00000308588 SAMD9Q5K651 1589 aa36.05■■■■□ 3.36
SNUPN-201ENST00000308588 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
SNUPN-201ENST00000308588 EFCAB5A4FU69 1503 aa35.94■■■■□ 3.34
SNUPN-201ENST00000308588 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
SNUPN-201ENST00000308588 ADCY10Q96PN6 1610 aa35.9■■■■□ 3.34
SNUPN-201ENST00000308588 UACAQ9BZF9 1416 aa35.88■■■■□ 3.34
SNUPN-201ENST00000308588 FHOD3Q2V2M9 1422 aa35.88■■■■□ 3.33
SNUPN-201ENST00000308588 ARHGAP35Q9NRY4 1499 aa35.86■■■■□ 3.33
SNUPN-201ENST00000308588 UHRF1BP1LA0JNW5 1464 aa35.83■■■■□ 3.33
SNUPN-201ENST00000308588 PLB1Q6P1J6 1458 aa35.82■■■■□ 3.33
SNUPN-201ENST00000308588 ABCC2Q92887 1545 aa35.8■■■■□ 3.32
SNUPN-201ENST00000308588 ABCA8O94911 1581 aa35.78■■■■□ 3.32
SNUPN-201ENST00000308588 NPM1P06748 294 aaKnown RBP eCLIP35.75■■■■□ 3.31
SNUPN-201ENST00000308588 CLIP1P30622 1438 aa35.73■■■■□ 3.31
SNUPN-201ENST00000308588 KDM5BQ9UGL1 1544 aa35.66■■■■□ 3.3
SNUPN-201ENST00000308588 CEP162Q5TB80 1403 aa35.65■■■■□ 3.3
SNUPN-201ENST00000308588 RAPGEF6Q8TEU7 1601 aa35.63■■■■□ 3.29
SNUPN-201ENST00000308588 FMN1Q68DA7 1419 aa35.62■■■■□ 3.29
SNUPN-201ENST00000308588 MAPKBP1O60336 1514 aa35.6■■■■□ 3.29
SNUPN-201ENST00000308588 ZCCHC11Q5TAX3 1644 aaKnown RBP35.56■■■■□ 3.28
SNUPN-201ENST00000308588 NUP153P49790 1475 aaKnown RBP35.54■■■■□ 3.28
SNUPN-201ENST00000308588 ARID3CA6NKF2 412 aa35.52■■■■□ 3.28
SNUPN-201ENST00000308588 TRHP20396 242 aaPredicted RBP35.52■■■■□ 3.28
SNUPN-201ENST00000308588 ATP10BO94823 1461 aa35.51■■■■□ 3.28
SNUPN-201ENST00000308588 ASXL2Q76L83 1435 aa35.5■■■■□ 3.27
SNUPN-201ENST00000308588 ABCC10Q5T3U5 1492 aa35.41■■■■□ 3.26
SNUPN-201ENST00000308588 ATP1B4Q9UN42 357 aaPredicted RBP35.4■■■■□ 3.26
SNUPN-201ENST00000308588 CASKIN1Q8WXD9 1431 aa35.39■■■■□ 3.26
SNUPN-201ENST00000308588 HECW1Q76N89 1606 aa35.38■■■■□ 3.25
SNUPN-201ENST00000308588 PCF11O94913 1555 aaKnown RBP35.36■■■■□ 3.25
SNUPN-201ENST00000308588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.36■■■■□ 3.25
SNUPN-201ENST00000308588 HNRNPUL2Q1KMD3 747 aaKnown RBP35.36■■■■□ 3.25
SNUPN-201ENST00000308588 WDR7Q9Y4E6 1490 aa35.35■■■■□ 3.25
SNUPN-201ENST00000308588 DIP2BQ9P265 1576 aa35.35■■■■□ 3.25
SNUPN-201ENST00000308588 FAM69CQ0P6D2 419 aa35.34■■■■□ 3.25
SNUPN-201ENST00000308588 KIF13AQ9H1H9 1805 aa35.33■■■■□ 3.25
SNUPN-201ENST00000308588 EPRSP07814 1512 aaKnown RBP35.33■■■■□ 3.25
SNUPN-201ENST00000308588 CDK13Q14004 1512 aaKnown RBP35.32■■■■□ 3.24
SNUPN-201ENST00000308588 FYCO1Q9BQS8 1478 aa35.3■■■■□ 3.24
SNUPN-201ENST00000308588 LRRIQ1Q96JM4 1722 aa35.25■■■■□ 3.23
SNUPN-201ENST00000308588 KCNH8Q96L42 1107 aa35.23■■■■□ 3.23
SNUPN-201ENST00000308588 PLEKHD1A6NEE1 506 aa35.22■■■■□ 3.23
SNUPN-201ENST00000308588 GLI2P10070 1586 aa35.22■■■■□ 3.23
SNUPN-201ENST00000308588 VPS8Q8N3P4 1428 aa35.2■■■■□ 3.23
SNUPN-201ENST00000308588 CCDC18Q5T9S5 1454 aa35.18■■■■□ 3.22
SNUPN-201ENST00000308588 CDK11AQ9UQ88 783 aaPredicted RBP35.13■■■■□ 3.21
SNUPN-201ENST00000308588 MAP3K4Q9Y6R4 1608 aa35.07■■■■□ 3.2
SNUPN-201ENST00000308588 TROQ12816 1431 aaPredicted RBP35.04■■■■□ 3.2
SNUPN-201ENST00000308588 TSPOAP1O95153 1857 aa35.02■■■■□ 3.2
SNUPN-201ENST00000308588 MAGI3Q5TCQ9 1506 aa35.02■■■■□ 3.2
SNUPN-201ENST00000308588 ABCA9Q8IUA7 1624 aa35.01■■■■□ 3.2
SNUPN-201ENST00000308588 CD109Q6YHK3 1445 aa35.01■■■■□ 3.19
SNUPN-201ENST00000308588 CFAP43Q8NDM7 1665 aa35■■■■□ 3.19
SNUPN-201ENST00000308588 PPRC1Q5VV67 1664 aaKnown RBP34.97■■■■□ 3.19
SNUPN-201ENST00000308588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.96■■■■□ 3.19
SNUPN-201ENST00000308588 KIF14Q15058 1648 aa34.92■■■■□ 3.18
SNUPN-201ENST00000308588 TTC37Q6PGP7 1564 aa34.9■■■■□ 3.18
SNUPN-201ENST00000308588 TIAM1Q13009 1591 aa34.89■■■■□ 3.18
SNUPN-201ENST00000308588 MTUS2Q5JR59 1369 aa34.87■■■■□ 3.17
SNUPN-201ENST00000308588 TEX14Q8IWB6 1497 aa34.86■■■■□ 3.17
SNUPN-201ENST00000308588 MAP3K1Q13233 1512 aa34.85■■■■□ 3.17
SNUPN-201ENST00000308588 EHBP1L1Q8N3D4 1523 aa34.8■■■■□ 3.16
SNUPN-201ENST00000308588 KANK4Q5T7N3 995 aaPredicted RBP34.76■■■■□ 3.16
SNUPN-201ENST00000308588 PLCH2O75038 1416 aa34.76■■■■□ 3.16
SNUPN-201ENST00000308588 LRRC9Q6ZRR7 1453 aa34.76■■■■□ 3.16
SNUPN-201ENST00000308588 APLP2Q06481 763 aa34.76■■■■□ 3.15
SNUPN-201ENST00000308588 MYO5CQ9NQX4 1742 aa34.7■■■■□ 3.15
SNUPN-201ENST00000308588 NEO1Q92859 1461 aa34.69■■■■□ 3.14
SNUPN-201ENST00000308588 COL17A1Q9UMD9 1497 aaPredicted RBP34.69■■■■□ 3.14
SNUPN-201ENST00000308588 FANCAO15360 1455 aa34.68■■■■□ 3.14
SNUPN-201ENST00000308588 ARAP3Q8WWN8 1544 aa34.68■■■■□ 3.14
SNUPN-201ENST00000308588 KDM6BO15054 1643 aa34.68■■■■□ 3.14
SNUPN-201ENST00000308588 PHLDB1Q86UU1 1377 aa34.66■■■■□ 3.14
SNUPN-201ENST00000308588 GPATCH8Q9UKJ3 1502 aaKnown RBP34.64■■■■□ 3.14
SNUPN-201ENST00000308588 EFCAB2Q5VUJ9 269 aa34.63■■■■□ 3.13
SNUPN-201ENST00000308588 NCOA2Q15596 1464 aa34.62■■■■□ 3.13
SNUPN-201ENST00000308588 SUPT6HQ7KZ85 1726 aaKnown RBP34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms