RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TNIKQ9UKE5 1360 aa11.38□□□□□ -0.59
PCDHB1-201ENST00000306549 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
PCDHB1-201ENST00000306549 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
PCDHB1-201ENST00000306549 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
PCDHB1-201ENST00000306549 KANK1Q14678 1352 aa11.36□□□□□ -0.59
PCDHB1-201ENST00000306549 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
PCDHB1-201ENST00000306549 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
PCDHB1-201ENST00000306549 CFDP1Q9UEE9 299 aaPredicted RBP11.34□□□□□ -0.59
PCDHB1-201ENST00000306549 ANP32CO43423 234 aa11.33□□□□□ -0.6
PCDHB1-201ENST00000306549 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.6
PCDHB1-201ENST00000306549 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
PCDHB1-201ENST00000306549 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
PCDHB1-201ENST00000306549 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
PCDHB1-201ENST00000306549 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
PCDHB1-201ENST00000306549 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
PCDHB1-201ENST00000306549 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
PCDHB1-201ENST00000306549 CCNB3Q8WWL7 1395 aa11.3□□□□□ -0.6
PCDHB1-201ENST00000306549 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
PCDHB1-201ENST00000306549 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
PCDHB1-201ENST00000306549 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
PCDHB1-201ENST00000306549 HRCP23327 699 aa11.28□□□□□ -0.6
PCDHB1-201ENST00000306549 RAPGEF2Q9Y4G8 1499 aa11.27□□□□□ -0.61
PCDHB1-201ENST00000306549 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
PCDHB1-201ENST00000306549 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
PCDHB1-201ENST00000306549 CCDC18Q5T9S5 1454 aa11.26□□□□□ -0.61
PCDHB1-201ENST00000306549 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
PCDHB1-201ENST00000306549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
PCDHB1-201ENST00000306549 MRC2Q9UBG0 1479 aa11.24□□□□□ -0.61
PCDHB1-201ENST00000306549 GAPVD1Q14C86 1478 aa11.23□□□□□ -0.61
PCDHB1-201ENST00000306549 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
PCDHB1-201ENST00000306549 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
PCDHB1-201ENST00000306549 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
PCDHB1-201ENST00000306549 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
PCDHB1-201ENST00000306549 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
PCDHB1-201ENST00000306549 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
PCDHB1-201ENST00000306549 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
PCDHB1-201ENST00000306549 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
PCDHB1-201ENST00000306549 CFTRP13569 1480 aa11.17□□□□□ -0.62
PCDHB1-201ENST00000306549 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
PCDHB1-201ENST00000306549 DNMBPQ6XZF7 1577 aa11.17□□□□□ -0.62
PCDHB1-201ENST00000306549 UPF2Q9HAU5 1272 aaKnown RBP11.17□□□□□ -0.62
PCDHB1-201ENST00000306549 CUL7Q14999 1698 aa11.17□□□□□ -0.62
PCDHB1-201ENST00000306549 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
PCDHB1-201ENST00000306549 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
PCDHB1-201ENST00000306549 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.62
PCDHB1-201ENST00000306549 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
PCDHB1-201ENST00000306549 VPS8Q8N3P4 1428 aa11.15□□□□□ -0.62
PCDHB1-201ENST00000306549 PLPPR3Q6T4P5 718 aa11.14□□□□□ -0.63
PCDHB1-201ENST00000306549 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
PCDHB1-201ENST00000306549 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
PCDHB1-201ENST00000306549 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
PCDHB1-201ENST00000306549 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
PCDHB1-201ENST00000306549 A0A0G2JS52 829 aa11.11□□□□□ -0.63
PCDHB1-201ENST00000306549 CUX1P39880 1505 aa11.1□□□□□ -0.63
PCDHB1-201ENST00000306549 PTPRGP23470 1445 aa11.09□□□□□ -0.63
PCDHB1-201ENST00000306549 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
PCDHB1-201ENST00000306549 ANKRD30AQ9BXX3 1397 aa11.09□□□□□ -0.63
PCDHB1-201ENST00000306549 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
PCDHB1-201ENST00000306549 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
PCDHB1-201ENST00000306549 KIF21BO75037 1637 aa11.07□□□□□ -0.64
PCDHB1-201ENST00000306549 HAP1P54257 671 aaPredicted RBP11.07□□□□□ -0.64
PCDHB1-201ENST00000306549 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDHB1-201ENST00000306549 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
PCDHB1-201ENST00000306549 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
PCDHB1-201ENST00000306549 RRP7BPQ9NSQ0 103 aa11.04□□□□□ -0.64
PCDHB1-201ENST00000306549 UACAQ9BZF9 1416 aa11.04□□□□□ -0.64
PCDHB1-201ENST00000306549 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
PCDHB1-201ENST00000306549 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
PCDHB1-201ENST00000306549 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
PCDHB1-201ENST00000306549 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.64
PCDHB1-201ENST00000306549 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
PCDHB1-201ENST00000306549 EID1Q9Y6B2 187 aa11.02□□□□□ -0.65
PCDHB1-201ENST00000306549 MYH16Q9H6N6 1097 aa11.02□□□□□ -0.65
PCDHB1-201ENST00000306549 POGKQ9P215 609 aa11.01□□□□□ -0.65
PCDHB1-201ENST00000306549 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
PCDHB1-201ENST00000306549 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
PCDHB1-201ENST00000306549 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
PCDHB1-201ENST00000306549 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
PCDHB1-201ENST00000306549 TMC1Q8TDI8 760 aa11□□□□□ -0.65
PCDHB1-201ENST00000306549 EIF3AQ14152 1382 aaKnown RBP11□□□□□ -0.65
PCDHB1-201ENST00000306549 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
PCDHB1-201ENST00000306549 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
PCDHB1-201ENST00000306549 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
PCDHB1-201ENST00000306549 CHMP4AQ9BY43 222 aa10.98□□□□□ -0.65
PCDHB1-201ENST00000306549 PLEKHH2Q8IVE3 1493 aa10.98□□□□□ -0.65
PCDHB1-201ENST00000306549 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
PCDHB1-201ENST00000306549 SUPT6HQ7KZ85 1726 aaKnown RBP10.97□□□□□ -0.65
PCDHB1-201ENST00000306549 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
PCDHB1-201ENST00000306549 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
PCDHB1-201ENST00000306549 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
PCDHB1-201ENST00000306549 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
PCDHB1-201ENST00000306549 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
PCDHB1-201ENST00000306549 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
PCDHB1-201ENST00000306549 IQGAP2Q13576 1575 aa10.93□□□□□ -0.66
PCDHB1-201ENST00000306549 BIVM-ERCC5R4GMW8 1640 aa10.93□□□□□ -0.66
PCDHB1-201ENST00000306549 FYCO1Q9BQS8 1478 aa10.92□□□□□ -0.66
PCDHB1-201ENST00000306549 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
PCDHB1-201ENST00000306549 CTTNBP2Q8WZ74 1663 aa10.92□□□□□ -0.66
PCDHB1-201ENST00000306549 ZRSR1Q15695 479 aaKnown RBP10.91□□□□□ -0.66
PCDHB1-201ENST00000306549 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms