RNA–Protein interactions for RNA: ENST00000306077.4

TMEM43-201, Transcript of transmembrane protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM43, Length 3,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43-201ENST00000306077 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
TMEM43-201ENST00000306077 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.32
TMEM43-201ENST00000306077 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
TMEM43-201ENST00000306077 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■■■□ 24
TMEM43-201ENST00000306077 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
TMEM43-201ENST00000306077 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
TMEM43-201ENST00000306077 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
TMEM43-201ENST00000306077 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
TMEM43-201ENST00000306077 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
TMEM43-201ENST00000306077 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
TMEM43-201ENST00000306077 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
TMEM43-201ENST00000306077 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
TMEM43-201ENST00000306077 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
TMEM43-201ENST00000306077 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
TMEM43-201ENST00000306077 LAMC3Q9Y6N6 1575 aa12.95□□□□□ -0.34
TMEM43-201ENST00000306077 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
TMEM43-201ENST00000306077 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
TMEM43-201ENST00000306077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM43-201ENST00000306077 THOC2Q8NI27 1593 aaKnown RBP12.92□□□□□ -0.34
TMEM43-201ENST00000306077 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
TMEM43-201ENST00000306077 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
TMEM43-201ENST00000306077 BCANQ96GW7 911 aa12.89□□□□□ -0.35
TMEM43-201ENST00000306077 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
TMEM43-201ENST00000306077 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
TMEM43-201ENST00000306077 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
TMEM43-201ENST00000306077 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
TMEM43-201ENST00000306077 SETD5Q9C0A6 1442 aa12.85□□□□□ -0.35
TMEM43-201ENST00000306077 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
TMEM43-201ENST00000306077 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
TMEM43-201ENST00000306077 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
TMEM43-201ENST00000306077 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
TMEM43-201ENST00000306077 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
TMEM43-201ENST00000306077 NESP48681 1621 aa12.81□□□□□ -0.36
TMEM43-201ENST00000306077 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
TMEM43-201ENST00000306077 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
TMEM43-201ENST00000306077 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
TMEM43-201ENST00000306077 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
TMEM43-201ENST00000306077 FMN1Q68DA7 1419 aa12.78□□□□□ -0.36
TMEM43-201ENST00000306077 PTPN23Q9H3S7 1636 aa12.78□□□□□ -0.36
TMEM43-201ENST00000306077 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.37
TMEM43-201ENST00000306077 EHBP1L1Q8N3D4 1523 aa12.76□□□□□ -0.37
TMEM43-201ENST00000306077 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
TMEM43-201ENST00000306077 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
TMEM43-201ENST00000306077 UGGT2Q9NYU1 1516 aa12.75□□□□□ -0.37
TMEM43-201ENST00000306077 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
TMEM43-201ENST00000306077 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
TMEM43-201ENST00000306077 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
TMEM43-201ENST00000306077 MYT1Q01538 1121 aa12.73□□□□□ -0.37
TMEM43-201ENST00000306077 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
TMEM43-201ENST00000306077 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
TMEM43-201ENST00000306077 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
TMEM43-201ENST00000306077 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
TMEM43-201ENST00000306077 MAGI3Q5TCQ9 1506 aa12.71□□□□□ -0.38
TMEM43-201ENST00000306077 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
TMEM43-201ENST00000306077 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
TMEM43-201ENST00000306077 AKNAQ7Z591 1439 aa12.68□□□□□ -0.38
TMEM43-201ENST00000306077 NCOA2Q15596 1464 aa12.68□□□□□ -0.38
TMEM43-201ENST00000306077 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
TMEM43-201ENST00000306077 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
TMEM43-201ENST00000306077 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
TMEM43-201ENST00000306077 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
TMEM43-201ENST00000306077 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
TMEM43-201ENST00000306077 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
TMEM43-201ENST00000306077 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
TMEM43-201ENST00000306077 FAM50AQ14320 339 aaKnown RBP12.65□□□□□ -0.38
TMEM43-201ENST00000306077 WDR62O43379 1518 aa12.65□□□□□ -0.38
TMEM43-201ENST00000306077 NAIPQ13075 1403 aa12.64□□□□□ -0.39
TMEM43-201ENST00000306077 FKBP8Q14318 412 aa12.63□□□□□ -0.39
TMEM43-201ENST00000306077 POLR1AO95602 1720 aaPredicted RBP12.63□□□□□ -0.39
TMEM43-201ENST00000306077 DENND4BO75064 1496 aaPredicted RBP12.62□□□□□ -0.39
TMEM43-201ENST00000306077 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
TMEM43-201ENST00000306077 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
TMEM43-201ENST00000306077 PPP1R15AO75807 674 aaPredicted RBP12.6□□□□□ -0.39
TMEM43-201ENST00000306077 KDM6BO15054 1643 aa12.59□□□□□ -0.39
TMEM43-201ENST00000306077 CNGB1Q14028 1251 aaPredicted RBP12.58□□□□□ -0.4
TMEM43-201ENST00000306077 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
TMEM43-201ENST00000306077 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
TMEM43-201ENST00000306077 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
TMEM43-201ENST00000306077 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
TMEM43-201ENST00000306077 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
TMEM43-201ENST00000306077 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
TMEM43-201ENST00000306077 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
TMEM43-201ENST00000306077 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
TMEM43-201ENST00000306077 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
TMEM43-201ENST00000306077 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
TMEM43-201ENST00000306077 NEFLP07196 543 aa12.54□□□□□ -0.4
TMEM43-201ENST00000306077 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
TMEM43-201ENST00000306077 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
TMEM43-201ENST00000306077 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.41
TMEM43-201ENST00000306077 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
TMEM43-201ENST00000306077 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
TMEM43-201ENST00000306077 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
TMEM43-201ENST00000306077 ITSN2Q9NZM3 1697 aa12.5□□□□□ -0.41
TMEM43-201ENST00000306077 IFT140Q96RY7 1462 aa12.5□□□□□ -0.41
TMEM43-201ENST00000306077 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
TMEM43-201ENST00000306077 ROCK1Q13464 1354 aa12.48□□□□□ -0.41
TMEM43-201ENST00000306077 KIAA0586Q9BVV6 1533 aa12.47□□□□□ -0.41
TMEM43-201ENST00000306077 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
TMEM43-201ENST00000306077 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
TMEM43-201ENST00000306077 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms