RNA–Protein interactions for RNA: ENST00000303577.6

PCBP1-201, Transcript of poly(rC) binding protein 1, humanhuman

APPRIS P1 BASIC

Gene PCBP1, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-201ENST00000303577 CTTNBP2Q8WZ74 1663 aa26.03■■□□□ 1.76
PCBP1-201ENST00000303577 GOLGA3Q08378 1498 aa26.03■■□□□ 1.76
PCBP1-201ENST00000303577 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
PCBP1-201ENST00000303577 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
PCBP1-201ENST00000303577 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
PCBP1-201ENST00000303577 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
PCBP1-201ENST00000303577 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
PCBP1-201ENST00000303577 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
PCBP1-201ENST00000303577 ERCC6L2Q5T890 1561 aa25.89■■□□□ 1.74
PCBP1-201ENST00000303577 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
PCBP1-201ENST00000303577 RIMBP3CA6NJZ7 1639 aa25.86■■□□□ 1.73
PCBP1-201ENST00000303577 RIMBP3BA6NNM3 1639 aa25.86■■□□□ 1.73
PCBP1-201ENST00000303577 RIMBP3Q9UFD9 1639 aa25.86■■□□□ 1.73
PCBP1-201ENST00000303577 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
PCBP1-201ENST00000303577 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
PCBP1-201ENST00000303577 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
PCBP1-201ENST00000303577 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
PCBP1-201ENST00000303577 UGGT2Q9NYU1 1516 aa25.79■■□□□ 1.72
PCBP1-201ENST00000303577 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
PCBP1-201ENST00000303577 KIAA0556O60303 1618 aa25.72■■□□□ 1.71
PCBP1-201ENST00000303577 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
PCBP1-201ENST00000303577 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
PCBP1-201ENST00000303577 CARMIL2Q6F5E8 1435 aa25.66■■□□□ 1.7
PCBP1-201ENST00000303577 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
PCBP1-201ENST00000303577 P3H3Q8IVL6 736 aa25.64■■□□□ 1.7
PCBP1-201ENST00000303577 CLIP1P30622 1438 aa25.61■■□□□ 1.69
PCBP1-201ENST00000303577 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
PCBP1-201ENST00000303577 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
PCBP1-201ENST00000303577 ARHGAP35Q9NRY4 1499 aa25.58■■□□□ 1.69
PCBP1-201ENST00000303577 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
PCBP1-201ENST00000303577 PTPRGP23470 1445 aa25.53■■□□□ 1.68
PCBP1-201ENST00000303577 ADCY10Q96PN6 1610 aa25.44■■□□□ 1.66
PCBP1-201ENST00000303577 PLB1Q6P1J6 1458 aa25.44■■□□□ 1.66
PCBP1-201ENST00000303577 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
PCBP1-201ENST00000303577 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
PCBP1-201ENST00000303577 ABCA8O94911 1581 aa25.39■■□□□ 1.66
PCBP1-201ENST00000303577 VPS8Q8N3P4 1428 aa25.39■■□□□ 1.65
PCBP1-201ENST00000303577 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
PCBP1-201ENST00000303577 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
PCBP1-201ENST00000303577 RAPGEF6Q8TEU7 1601 aa25.36■■□□□ 1.65
PCBP1-201ENST00000303577 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
PCBP1-201ENST00000303577 FMN1Q68DA7 1419 aa25.31■■□□□ 1.64
PCBP1-201ENST00000303577 UHRF1BP1LA0JNW5 1464 aa25.31■■□□□ 1.64
PCBP1-201ENST00000303577 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
PCBP1-201ENST00000303577 ARID3CA6NKF2 412 aa25.29■■□□□ 1.64
PCBP1-201ENST00000303577 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
PCBP1-201ENST00000303577 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
PCBP1-201ENST00000303577 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
PCBP1-201ENST00000303577 ATP1B4Q9UN42 357 aaPredicted RBP25.23■■□□□ 1.63
PCBP1-201ENST00000303577 HECW1Q76N89 1606 aa25.22■■□□□ 1.63
PCBP1-201ENST00000303577 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
PCBP1-201ENST00000303577 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
PCBP1-201ENST00000303577 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
PCBP1-201ENST00000303577 ATP10BO94823 1461 aa25.17■■□□□ 1.62
PCBP1-201ENST00000303577 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
PCBP1-201ENST00000303577 APLP2Q06481 763 aa25.17■■□□□ 1.62
PCBP1-201ENST00000303577 NPM1P06748 294 aaKnown RBP eCLIP25.16■■□□□ 1.62
PCBP1-201ENST00000303577 EPRSP07814 1512 aaKnown RBP25.13■■□□□ 1.61
PCBP1-201ENST00000303577 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
PCBP1-201ENST00000303577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
PCBP1-201ENST00000303577 HNRNPUL2Q1KMD3 747 aaKnown RBP25.1■■□□□ 1.61
PCBP1-201ENST00000303577 ASXL2Q76L83 1435 aa25.09■■□□□ 1.61
PCBP1-201ENST00000303577 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
PCBP1-201ENST00000303577 WDR7Q9Y4E6 1490 aa25.02■■□□□ 1.6
PCBP1-201ENST00000303577 CFAP43Q8NDM7 1665 aa25■■□□□ 1.59
PCBP1-201ENST00000303577 DIP2BQ9P265 1576 aa24.99■■□□□ 1.59
PCBP1-201ENST00000303577 KIF13AQ9H1H9 1805 aa24.99■■□□□ 1.59
PCBP1-201ENST00000303577 MAGI3Q5TCQ9 1506 aa24.98■■□□□ 1.59
PCBP1-201ENST00000303577 TIAM1Q13009 1591 aa24.96■■□□□ 1.59
PCBP1-201ENST00000303577 ABCC10Q5T3U5 1492 aa24.95■■□□□ 1.58
PCBP1-201ENST00000303577 KCNH8Q96L42 1107 aa24.95■■□□□ 1.58
PCBP1-201ENST00000303577 TRHP20396 242 aaPredicted RBP24.93■■□□□ 1.58
PCBP1-201ENST00000303577 PLEKHD1A6NEE1 506 aa24.92■■□□□ 1.58
PCBP1-201ENST00000303577 MAP3K1Q13233 1512 aa24.91■■□□□ 1.58
PCBP1-201ENST00000303577 KIF14Q15058 1648 aa24.91■■□□□ 1.58
PCBP1-201ENST00000303577 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.57
PCBP1-201ENST00000303577 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
PCBP1-201ENST00000303577 KANK4Q5T7N3 995 aaPredicted RBP24.88■■□□□ 1.57
PCBP1-201ENST00000303577 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
PCBP1-201ENST00000303577 GLI2P10070 1586 aa24.85■■□□□ 1.57
PCBP1-201ENST00000303577 TTC37Q6PGP7 1564 aa24.85■■□□□ 1.57
PCBP1-201ENST00000303577 TSPOAP1O95153 1857 aa24.84■■□□□ 1.57
PCBP1-201ENST00000303577 MTUS2Q5JR59 1369 aa24.84■■□□□ 1.57
PCBP1-201ENST00000303577 EHBP1L1Q8N3D4 1523 aa24.83■■□□□ 1.56
PCBP1-201ENST00000303577 MAP3K4Q9Y6R4 1608 aa24.83■■□□□ 1.56
PCBP1-201ENST00000303577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.82■■□□□ 1.566e-16■■□□□ 12.5
PCBP1-201ENST00000303577 ABCA9Q8IUA7 1624 aa24.82■■□□□ 1.56
PCBP1-201ENST00000303577 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
PCBP1-201ENST00000303577 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
PCBP1-201ENST00000303577 HRCP23327 699 aa24.75■■□□□ 1.55
PCBP1-201ENST00000303577 SUPT6HQ7KZ85 1726 aaKnown RBP24.74■■□□□ 1.55
PCBP1-201ENST00000303577 CD109Q6YHK3 1445 aa24.73■■□□□ 1.55
PCBP1-201ENST00000303577 MYO5CQ9NQX4 1742 aa24.71■■□□□ 1.55
PCBP1-201ENST00000303577 CDC42BPAQ5VT25 1732 aa24.7■■□□□ 1.54
PCBP1-201ENST00000303577 NCOA2Q15596 1464 aa24.69■■□□□ 1.54
PCBP1-201ENST00000303577 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
PCBP1-201ENST00000303577 CDC42BPBQ9Y5S2 1711 aa24.65■■□□□ 1.54
PCBP1-201ENST00000303577 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
PCBP1-201ENST00000303577 GPATCH8Q9UKJ3 1502 aaKnown RBP24.62■■□□□ 1.53
PCBP1-201ENST00000303577 PLCH2O75038 1416 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms