RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 CLIP1P30622 1438 aa9.01□□□□□ -0.97
SCAPER-201ENST00000303521 FAM69CQ0P6D2 419 aa9□□□□□ -0.97
SCAPER-201ENST00000303521 GOLGA3Q08378 1498 aa9□□□□□ -0.97
SCAPER-201ENST00000303521 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
SCAPER-201ENST00000303521 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
SCAPER-201ENST00000303521 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
SCAPER-201ENST00000303521 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
SCAPER-201ENST00000303521 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
SCAPER-201ENST00000303521 CARMIL1Q5VZK9 1371 aa8.97□□□□□ -0.97
SCAPER-201ENST00000303521 PTPRGP23470 1445 aa8.96□□□□□ -0.98
SCAPER-201ENST00000303521 CCDC88BA6NC98 1476 aa8.94□□□□□ -0.98
SCAPER-201ENST00000303521 EFCAB2Q5VUJ9 269 aa8.94□□□□□ -0.98
SCAPER-201ENST00000303521 FAM50AQ14320 339 aaKnown RBP8.94□□□□□ -0.98
SCAPER-201ENST00000303521 GAPVD1Q14C86 1478 aa8.93□□□□□ -0.98
SCAPER-201ENST00000303521 POGZQ7Z3K3 1410 aa8.92□□□□□ -0.98
SCAPER-201ENST00000303521 CFTRP13569 1480 aa8.92□□□□□ -0.98
SCAPER-201ENST00000303521 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
SCAPER-201ENST00000303521 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
SCAPER-201ENST00000303521 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
SCAPER-201ENST00000303521 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-201ENST00000303521 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
SCAPER-201ENST00000303521 SYNJ1O43426 1573 aa8.9□□□□□ -0.98
SCAPER-201ENST00000303521 KANK1Q14678 1352 aa8.9□□□□□ -0.98
SCAPER-201ENST00000303521 DMRT2Q9Y5R5 561 aa8.9□□□□□ -0.99
SCAPER-201ENST00000303521 FHAD1B1AJZ9 1412 aa8.9□□□□□ -0.99
SCAPER-201ENST00000303521 HAP1P54257 671 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-201ENST00000303521 RUSC2Q8N2Y8 1516 aa8.88□□□□□ -0.99
SCAPER-201ENST00000303521 NESP48681 1621 aa8.88□□□□□ -0.99
SCAPER-201ENST00000303521 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
SCAPER-201ENST00000303521 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
SCAPER-201ENST00000303521 ITGAEP38570 1179 aa8.86□□□□□ -0.99
SCAPER-201ENST00000303521 MLECQ14165 292 aa8.86□□□□□ -0.99
SCAPER-201ENST00000303521 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-201ENST00000303521 TNIKQ9UKE5 1360 aa8.86□□□□□ -0.99
SCAPER-201ENST00000303521 MAGI1Q96QZ7 1491 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-201ENST00000303521 EID1Q9Y6B2 187 aa8.85□□□□□ -0.99
SCAPER-201ENST00000303521 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
SCAPER-201ENST00000303521 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
SCAPER-201ENST00000303521 DNMBPQ6XZF7 1577 aa8.83□□□□□ -1
SCAPER-201ENST00000303521 FGD5Q6ZNL6 1462 aa8.82□□□□□ -1
SCAPER-201ENST00000303521 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -1
SCAPER-201ENST00000303521 PHF23Q9BUL5 403 aaPredicted RBP8.82□□□□□ -1
SCAPER-201ENST00000303521 TOPBP1Q92547 1522 aa8.81□□□□□ -1
SCAPER-201ENST00000303521 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
SCAPER-201ENST00000303521 SYNJ2O15056 1496 aa8.8□□□□□ -1
SCAPER-201ENST00000303521 PRG4Q92954 1404 aaPredicted RBP8.79□□□□□ -1
SCAPER-201ENST00000303521 FMN1Q68DA7 1419 aa8.79□□□□□ -1
SCAPER-201ENST00000303521 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
SCAPER-201ENST00000303521 ZNF326Q5BKZ1 582 aaKnown RBP8.79□□□□□ -1
SCAPER-201ENST00000303521 RAPGEF2Q9Y4G8 1499 aa8.79□□□□□ -1
SCAPER-201ENST00000303521 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
SCAPER-201ENST00000303521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.78□□□□□ -12e-6■■■□□ 18.3
SCAPER-201ENST00000303521 ANP32EQ9BTT0 268 aa8.78□□□□□ -1
SCAPER-201ENST00000303521 PEG3Q9GZU2 1588 aa8.77□□□□□ -1.01
SCAPER-201ENST00000303521 ANP32CO43423 234 aa8.75□□□□□ -1.01
SCAPER-201ENST00000303521 NEFMP07197 916 aa8.75□□□□□ -1.01
SCAPER-201ENST00000303521 CEP162Q5TB80 1403 aa8.75□□□□□ -1.01
SCAPER-201ENST00000303521 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
SCAPER-201ENST00000303521 MEX3CQ5U5Q3 659 aaKnown RBP8.73□□□□□ -1.01
SCAPER-201ENST00000303521 PLB1Q6P1J6 1458 aa8.73□□□□□ -1.01
SCAPER-201ENST00000303521 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
SCAPER-201ENST00000303521 RAD54L2Q9Y4B4 1467 aa8.72□□□□□ -1.01
SCAPER-201ENST00000303521 GGT6Q6P531 493 aa8.71□□□□□ -1.02
SCAPER-201ENST00000303521 A0A0G2JS52 829 aa8.7□□□□□ -1.02
SCAPER-201ENST00000303521 POLA1P09884 1462 aaPredicted RBP8.7□□□□□ -1.02
SCAPER-201ENST00000303521 WDR62O43379 1518 aa8.69□□□□□ -1.02
SCAPER-201ENST00000303521 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
SCAPER-201ENST00000303521 CCDC18Q5T9S5 1454 aa8.68□□□□□ -1.02
SCAPER-201ENST00000303521 ANP32AP39687 249 aaKnown RBP8.68□□□□□ -1.02
SCAPER-201ENST00000303521 FKBP8Q14318 412 aa8.68□□□□□ -1.02
SCAPER-201ENST00000303521 WDR97A6NE52 1622 aa8.67□□□□□ -1.02
SCAPER-201ENST00000303521 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
SCAPER-201ENST00000303521 MIER1Q8N108 512 aa8.66□□□□□ -1.02
SCAPER-201ENST00000303521 WASHC2CQ9Y4E1 1318 aa8.66□□□□□ -1.02
SCAPER-201ENST00000303521 KIAA0586Q9BVV6 1533 aa8.66□□□□□ -1.02
SCAPER-201ENST00000303521 SLC24A1O60721 1099 aa8.65□□□□□ -1.02
SCAPER-201ENST00000303521 UACAQ9BZF9 1416 aa8.65□□□□□ -1.02
SCAPER-201ENST00000303521 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.65□□□□□ -1.03
SCAPER-201ENST00000303521 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
SCAPER-201ENST00000303521 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
SCAPER-201ENST00000303521 GRIN2AQ12879 1464 aa8.63□□□□□ -1.03
SCAPER-201ENST00000303521 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
SCAPER-201ENST00000303521 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
SCAPER-201ENST00000303521 THEMISQ8N1K5 641 aaPredicted RBP8.63□□□□□ -1.03
SCAPER-201ENST00000303521 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
SCAPER-201ENST00000303521 PLEKHH2Q8IVE3 1493 aa8.61□□□□□ -1.03
SCAPER-201ENST00000303521 URB2Q14146 1524 aaKnown RBP8.61□□□□□ -1.03
SCAPER-201ENST00000303521 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
SCAPER-201ENST00000303521 CD109Q6YHK3 1445 aa8.61□□□□□ -1.03
SCAPER-201ENST00000303521 KIF21BO75037 1637 aa8.6□□□□□ -1.03
SCAPER-201ENST00000303521 PPP6R1Q9UPN7 881 aa8.6□□□□□ -1.03
SCAPER-201ENST00000303521 KIF3BO15066 747 aa8.6□□□□□ -1.03
SCAPER-201ENST00000303521 GLIPR1L2Q4G1C9 344 aa8.59□□□□□ -1.03
SCAPER-201ENST00000303521 POGKQ9P215 609 aa8.59□□□□□ -1.03
SCAPER-201ENST00000303521 TOM1O60784 492 aa8.58□□□□□ -1.04
SCAPER-201ENST00000303521 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
SCAPER-201ENST00000303521 ATF3P18847 181 aa8.58□□□□□ -1.04
SCAPER-201ENST00000303521 LMOD2Q6P5Q4 547 aa8.58□□□□□ -1.04
SCAPER-201ENST00000303521 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
SCAPER-201ENST00000303521 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms