RNA–Protein interactions for RNA: ENST00000303143.9

COL8A2-201, Transcript of collagen type VIII alpha 2 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A2, Length 4,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-201ENST00000303143 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
COL8A2-201ENST00000303143 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
COL8A2-201ENST00000303143 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
COL8A2-201ENST00000303143 KIF21BO75037 1637 aa20.36■□□□□ 0.85
COL8A2-201ENST00000303143 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
COL8A2-201ENST00000303143 CUX1P39880 1505 aa20.35■□□□□ 0.85
COL8A2-201ENST00000303143 BCANQ96GW7 911 aa20.32■□□□□ 0.84
COL8A2-201ENST00000303143 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
COL8A2-201ENST00000303143 NESP48681 1621 aa20.27■□□□□ 0.84
COL8A2-201ENST00000303143 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
COL8A2-201ENST00000303143 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
COL8A2-201ENST00000303143 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
COL8A2-201ENST00000303143 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
COL8A2-201ENST00000303143 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
COL8A2-201ENST00000303143 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
COL8A2-201ENST00000303143 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
COL8A2-201ENST00000303143 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
COL8A2-201ENST00000303143 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
COL8A2-201ENST00000303143 ARHGAP35Q9NRY4 1499 aa20.14■□□□□ 0.81
COL8A2-201ENST00000303143 ANP32CO43423 234 aa20.13■□□□□ 0.81
COL8A2-201ENST00000303143 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
COL8A2-201ENST00000303143 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
COL8A2-201ENST00000303143 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
COL8A2-201ENST00000303143 MIER1Q8N108 512 aa20.1■□□□□ 0.81
COL8A2-201ENST00000303143 PLEKHD1A6NEE1 506 aa20.1■□□□□ 0.81
COL8A2-201ENST00000303143 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
COL8A2-201ENST00000303143 DAXXQ9UER7 740 aaPredicted RBP20.09■□□□□ 0.81
COL8A2-201ENST00000303143 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
COL8A2-201ENST00000303143 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
COL8A2-201ENST00000303143 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
COL8A2-201ENST00000303143 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
COL8A2-201ENST00000303143 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
COL8A2-201ENST00000303143 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
COL8A2-201ENST00000303143 TSPY4P0CV99 314 aa20.05■□□□□ 0.8
COL8A2-201ENST00000303143 TSPY10P0CW01 314 aa20.05■□□□□ 0.8
COL8A2-201ENST00000303143 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
COL8A2-201ENST00000303143 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
COL8A2-201ENST00000303143 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL8A2-201ENST00000303143 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
COL8A2-201ENST00000303143 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
COL8A2-201ENST00000303143 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
COL8A2-201ENST00000303143 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
COL8A2-201ENST00000303143 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
COL8A2-201ENST00000303143 CARMIL2Q6F5E8 1435 aa19.93■□□□□ 0.78
COL8A2-201ENST00000303143 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
COL8A2-201ENST00000303143 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
COL8A2-201ENST00000303143 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
COL8A2-201ENST00000303143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL8A2-201ENST00000303143 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
COL8A2-201ENST00000303143 MRC2Q9UBG0 1479 aa19.87■□□□□ 0.77
COL8A2-201ENST00000303143 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
COL8A2-201ENST00000303143 FKBP8Q14318 412 aa19.86■□□□□ 0.77
COL8A2-201ENST00000303143 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL8A2-201ENST00000303143 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
COL8A2-201ENST00000303143 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
COL8A2-201ENST00000303143 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
COL8A2-201ENST00000303143 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.77
COL8A2-201ENST00000303143 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL8A2-201ENST00000303143 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
COL8A2-201ENST00000303143 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
COL8A2-201ENST00000303143 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
COL8A2-201ENST00000303143 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
COL8A2-201ENST00000303143 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
COL8A2-201ENST00000303143 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
COL8A2-201ENST00000303143 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
COL8A2-201ENST00000303143 FOXD1Q16676 465 aa19.72■□□□□ 0.75
COL8A2-201ENST00000303143 CUL7Q14999 1698 aa19.7■□□□□ 0.74
COL8A2-201ENST00000303143 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
COL8A2-201ENST00000303143 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
COL8A2-201ENST00000303143 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL8A2-201ENST00000303143 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
COL8A2-201ENST00000303143 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
COL8A2-201ENST00000303143 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
COL8A2-201ENST00000303143 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
COL8A2-201ENST00000303143 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
COL8A2-201ENST00000303143 PTPRGP23470 1445 aa19.61■□□□□ 0.73
COL8A2-201ENST00000303143 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
COL8A2-201ENST00000303143 PKD2Q13563 968 aa19.6■□□□□ 0.73
COL8A2-201ENST00000303143 ANKRD30AQ9BXX3 1397 aa19.6■□□□□ 0.73
COL8A2-201ENST00000303143 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
COL8A2-201ENST00000303143 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
COL8A2-201ENST00000303143 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
COL8A2-201ENST00000303143 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
COL8A2-201ENST00000303143 HNRNPMP52272 730 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL8A2-201ENST00000303143 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
COL8A2-201ENST00000303143 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
COL8A2-201ENST00000303143 IQGAP2Q13576 1575 aa19.54■□□□□ 0.72
COL8A2-201ENST00000303143 NUP155O75694 1391 aa19.54■□□□□ 0.72
COL8A2-201ENST00000303143 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
COL8A2-201ENST00000303143 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
COL8A2-201ENST00000303143 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
COL8A2-201ENST00000303143 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
COL8A2-201ENST00000303143 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
COL8A2-201ENST00000303143 ANP32AP39687 249 aaKnown RBP19.52■□□□□ 0.72
COL8A2-201ENST00000303143 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
COL8A2-201ENST00000303143 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
COL8A2-201ENST00000303143 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
COL8A2-201ENST00000303143 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
COL8A2-201ENST00000303143 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
COL8A2-201ENST00000303143 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms