RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-201ENST00000302763 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
CTNNA1-201ENST00000302763 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
CTNNA1-201ENST00000302763 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
CTNNA1-201ENST00000302763 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
CTNNA1-201ENST00000302763 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
CTNNA1-201ENST00000302763 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
CTNNA1-201ENST00000302763 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
CTNNA1-201ENST00000302763 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
CTNNA1-201ENST00000302763 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-201ENST00000302763 DISP1Q96F81 1524 aa11.79□□□□□ -0.52
CTNNA1-201ENST00000302763 CHD1O14646 1710 aa11.79□□□□□ -0.52
CTNNA1-201ENST00000302763 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
CTNNA1-201ENST00000302763 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
CTNNA1-201ENST00000302763 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
CTNNA1-201ENST00000302763 NUP160Q12769 1436 aa11.76□□□□□ -0.53
CTNNA1-201ENST00000302763 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-201ENST00000302763 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
CTNNA1-201ENST00000302763 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
CTNNA1-201ENST00000302763 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
CTNNA1-201ENST00000302763 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
CTNNA1-201ENST00000302763 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
CTNNA1-201ENST00000302763 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-201ENST00000302763 CASKIN1Q8WXD9 1431 aa11.71□□□□□ -0.53
CTNNA1-201ENST00000302763 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.54
CTNNA1-201ENST00000302763 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-201ENST00000302763 FHOD3Q2V2M9 1422 aa11.7□□□□□ -0.54
CTNNA1-201ENST00000302763 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
CTNNA1-201ENST00000302763 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
CTNNA1-201ENST00000302763 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
CTNNA1-201ENST00000302763 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-201ENST00000302763 ADCY10Q96PN6 1610 aa11.63□□□□□ -0.55
CTNNA1-201ENST00000302763 ABCA8O94911 1581 aa11.63□□□□□ -0.55
CTNNA1-201ENST00000302763 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-201ENST00000302763 RAPGEF6Q8TEU7 1601 aa11.62□□□□□ -0.55
CTNNA1-201ENST00000302763 HECW1Q76N89 1606 aa11.61□□□□□ -0.55
CTNNA1-201ENST00000302763 HRCP23327 699 aa11.6□□□□□ -0.55
CTNNA1-201ENST00000302763 NUP153P49790 1475 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-201ENST00000302763 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
CTNNA1-201ENST00000302763 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
CTNNA1-201ENST00000302763 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
CTNNA1-201ENST00000302763 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-201ENST00000302763 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-201ENST00000302763 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
CTNNA1-201ENST00000302763 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-201ENST00000302763 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
CTNNA1-201ENST00000302763 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-201ENST00000302763 KIF14Q15058 1648 aa11.51□□□□□ -0.57
CTNNA1-201ENST00000302763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTNNA1-201ENST00000302763 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
CTNNA1-201ENST00000302763 CROCC2H7BZ55 1655 aa11.5□□□□□ -0.57
CTNNA1-201ENST00000302763 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
CTNNA1-201ENST00000302763 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
CTNNA1-201ENST00000302763 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
CTNNA1-201ENST00000302763 GCC2Q8IWJ2 1684 aa11.48□□□□□ -0.57
CTNNA1-201ENST00000302763 PTPN23Q9H3S7 1636 aa11.47□□□□□ -0.57
CTNNA1-201ENST00000302763 CDC42BPBQ9Y5S2 1711 aa11.45□□□□□ -0.58
CTNNA1-201ENST00000302763 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
CTNNA1-201ENST00000302763 ABCC10Q5T3U5 1492 aa11.44□□□□□ -0.58
CTNNA1-201ENST00000302763 CCER1Q8TC90 406 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-201ENST00000302763 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
CTNNA1-201ENST00000302763 KDM6BO15054 1643 aa11.44□□□□□ -0.58
CTNNA1-201ENST00000302763 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
CTNNA1-201ENST00000302763 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
CTNNA1-201ENST00000302763 DENND4BO75064 1496 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-201ENST00000302763 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-201ENST00000302763 KDM5BQ9UGL1 1544 aa11.41□□□□□ -0.58
CTNNA1-201ENST00000302763 ATP10BO94823 1461 aa11.41□□□□□ -0.58
CTNNA1-201ENST00000302763 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-201ENST00000302763 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
CTNNA1-201ENST00000302763 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
CTNNA1-201ENST00000302763 PREX2Q70Z35 1606 aa11.39□□□□□ -0.59
CTNNA1-201ENST00000302763 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-201ENST00000302763 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
CTNNA1-201ENST00000302763 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
CTNNA1-201ENST00000302763 APLP2Q06481 763 aa11.37□□□□□ -0.59
CTNNA1-201ENST00000302763 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
CTNNA1-201ENST00000302763 ADGBQ8N7X0 1667 aa11.37□□□□□ -0.59
CTNNA1-201ENST00000302763 DHX57Q6P158 1386 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-201ENST00000302763 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
CTNNA1-201ENST00000302763 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-201ENST00000302763 MIA2Q96PC5 1412 aa11.34□□□□□ -0.59
CTNNA1-201ENST00000302763 GPATCH8Q9UKJ3 1502 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-201ENST00000302763 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.59
CTNNA1-201ENST00000302763 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-201ENST00000302763 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
CTNNA1-201ENST00000302763 AKNAQ7Z591 1439 aa11.33□□□□□ -0.6
CTNNA1-201ENST00000302763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.33□□□□□ -0.66e-6■■■■■ 38.2
CTNNA1-201ENST00000302763 HFM1A2PYH4 1435 aa11.32□□□□□ -0.6
CTNNA1-201ENST00000302763 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-201ENST00000302763 NAIPQ13075 1403 aa11.31□□□□□ -0.6
CTNNA1-201ENST00000302763 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
CTNNA1-201ENST00000302763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-201ENST00000302763 MYO5CQ9NQX4 1742 aa11.29□□□□□ -0.6
CTNNA1-201ENST00000302763 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
CTNNA1-201ENST00000302763 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
CTNNA1-201ENST00000302763 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
CTNNA1-201ENST00000302763 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
CTNNA1-201ENST00000302763 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.6
CTNNA1-201ENST00000302763 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms