RNA–Protein interactions for RNA: ENST00000302287.7

VSTM2A-201, Transcript of V-set and transmembrane domain containing 2A, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A, Length 3,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-201ENST00000302287 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
VSTM2A-201ENST00000302287 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
VSTM2A-201ENST00000302287 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
VSTM2A-201ENST00000302287 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
VSTM2A-201ENST00000302287 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
VSTM2A-201ENST00000302287 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
VSTM2A-201ENST00000302287 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
VSTM2A-201ENST00000302287 PLEKHG5O94827 1062 aa18.02■□□□□ 0.47
VSTM2A-201ENST00000302287 NOP58Q9Y2X3 529 aaKnown RBP18.01■□□□□ 0.47
VSTM2A-201ENST00000302287 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
VSTM2A-201ENST00000302287 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
VSTM2A-201ENST00000302287 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
VSTM2A-201ENST00000302287 PKNOX2Q96KN3 472 aa17.98■□□□□ 0.47
VSTM2A-201ENST00000302287 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
VSTM2A-201ENST00000302287 ERICH6BQ5W0A0 696 aa17.97■□□□□ 0.47
VSTM2A-201ENST00000302287 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
VSTM2A-201ENST00000302287 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
VSTM2A-201ENST00000302287 SOGA1O94964 1423 aa17.94■□□□□ 0.46
VSTM2A-201ENST00000302287 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
VSTM2A-201ENST00000302287 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
VSTM2A-201ENST00000302287 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
VSTM2A-201ENST00000302287 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
VSTM2A-201ENST00000302287 BRPF3Q9ULD4 1205 aa17.88■□□□□ 0.45
VSTM2A-201ENST00000302287 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
VSTM2A-201ENST00000302287 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
VSTM2A-201ENST00000302287 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
VSTM2A-201ENST00000302287 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
VSTM2A-201ENST00000302287 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
VSTM2A-201ENST00000302287 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
VSTM2A-201ENST00000302287 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
VSTM2A-201ENST00000302287 WDR62O43379 1518 aa17.82■□□□□ 0.44
VSTM2A-201ENST00000302287 EEA1Q15075 1411 aa17.79■□□□□ 0.44
VSTM2A-201ENST00000302287 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
VSTM2A-201ENST00000302287 ZBTB47Q9UFB7 747 aaPredicted RBP17.77■□□□□ 0.44
VSTM2A-201ENST00000302287 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
VSTM2A-201ENST00000302287 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
VSTM2A-201ENST00000302287 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
VSTM2A-201ENST00000302287 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
VSTM2A-201ENST00000302287 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
VSTM2A-201ENST00000302287 NEFMP07197 916 aa17.74■□□□□ 0.43
VSTM2A-201ENST00000302287 ANP32CO43423 234 aa17.73■□□□□ 0.43
VSTM2A-201ENST00000302287 CUX2O14529 1486 aa17.72■□□□□ 0.43
VSTM2A-201ENST00000302287 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
VSTM2A-201ENST00000302287 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
VSTM2A-201ENST00000302287 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
VSTM2A-201ENST00000302287 KIF21BO75037 1637 aa17.7■□□□□ 0.42
VSTM2A-201ENST00000302287 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
VSTM2A-201ENST00000302287 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
VSTM2A-201ENST00000302287 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
VSTM2A-201ENST00000302287 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
VSTM2A-201ENST00000302287 IPO9Q96P70 1041 aaKnown RBP17.65■□□□□ 0.42
VSTM2A-201ENST00000302287 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
VSTM2A-201ENST00000302287 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
VSTM2A-201ENST00000302287 ZMYND15Q9H091 742 aa17.62■□□□□ 0.41
VSTM2A-201ENST00000302287 IGF1RP08069 1367 aa17.59■□□□□ 0.41
VSTM2A-201ENST00000302287 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
VSTM2A-201ENST00000302287 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
VSTM2A-201ENST00000302287 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
VSTM2A-201ENST00000302287 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
VSTM2A-201ENST00000302287 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
VSTM2A-201ENST00000302287 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
VSTM2A-201ENST00000302287 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
VSTM2A-201ENST00000302287 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
VSTM2A-201ENST00000302287 A0A0U1RQG5 324 aaPredicted RBP17.53■□□□□ 0.4
VSTM2A-201ENST00000302287 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
VSTM2A-201ENST00000302287 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
VSTM2A-201ENST00000302287 CUL7Q14999 1698 aa17.53■□□□□ 0.4
VSTM2A-201ENST00000302287 C11orf95C9JLR9 678 aaPredicted RBP17.52■□□□□ 0.4
VSTM2A-201ENST00000302287 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.4
VSTM2A-201ENST00000302287 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
VSTM2A-201ENST00000302287 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
VSTM2A-201ENST00000302287 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
VSTM2A-201ENST00000302287 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
VSTM2A-201ENST00000302287 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
VSTM2A-201ENST00000302287 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
VSTM2A-201ENST00000302287 ARXQ96QS3 562 aa17.46■□□□□ 0.39
VSTM2A-201ENST00000302287 WASHC2AQ641Q2 1341 aa17.46■□□□□ 0.38
VSTM2A-201ENST00000302287 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
VSTM2A-201ENST00000302287 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
VSTM2A-201ENST00000302287 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
VSTM2A-201ENST00000302287 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
VSTM2A-201ENST00000302287 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
VSTM2A-201ENST00000302287 GSE1Q14687 1217 aa17.4■□□□□ 0.38
VSTM2A-201ENST00000302287 GLIPR1L2Q4G1C9 344 aa17.39■□□□□ 0.37
VSTM2A-201ENST00000302287 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
VSTM2A-201ENST00000302287 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
VSTM2A-201ENST00000302287 WASHC2CQ9Y4E1 1318 aa17.36■□□□□ 0.37
VSTM2A-201ENST00000302287 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
VSTM2A-201ENST00000302287 SKAP1Q86WV1 359 aa17.35■□□□□ 0.37
VSTM2A-201ENST00000302287 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
VSTM2A-201ENST00000302287 DCAF11Q8TEB1 546 aa17.33■□□□□ 0.36
VSTM2A-201ENST00000302287 CLIP1P30622 1438 aa17.32■□□□□ 0.36
VSTM2A-201ENST00000302287 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
VSTM2A-201ENST00000302287 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
VSTM2A-201ENST00000302287 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
VSTM2A-201ENST00000302287 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
VSTM2A-201ENST00000302287 AKNAQ7Z591 1439 aa17.25■□□□□ 0.35
VSTM2A-201ENST00000302287 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
VSTM2A-201ENST00000302287 HSP90AA2PQ14568 343 aaPredicted RBP17.24■□□□□ 0.35
VSTM2A-201ENST00000302287 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms