RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CTTNBP2Q8WZ74 1663 aa10.43□□□□□ -0.74
TMC1-201ENST00000297784 CLIP1P30622 1438 aa10.41□□□□□ -0.74
TMC1-201ENST00000297784 MAGI1Q96QZ7 1491 aaPredicted RBP10.41□□□□□ -0.74
TMC1-201ENST00000297784 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
TMC1-201ENST00000297784 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
TMC1-201ENST00000297784 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
TMC1-201ENST00000297784 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
TMC1-201ENST00000297784 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
TMC1-201ENST00000297784 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
TMC1-201ENST00000297784 ZEB1P37275 1124 aaPredicted RBP10.35□□□□□ -0.75
TMC1-201ENST00000297784 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
TMC1-201ENST00000297784 CHD1O14646 1710 aa10.34□□□□□ -0.75
TMC1-201ENST00000297784 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
TMC1-201ENST00000297784 SAMD9Q5K651 1589 aa10.32□□□□□ -0.76
TMC1-201ENST00000297784 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
TMC1-201ENST00000297784 IQGAP2Q13576 1575 aa10.32□□□□□ -0.76
TMC1-201ENST00000297784 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
TMC1-201ENST00000297784 NUP160Q12769 1436 aa10.31□□□□□ -0.76
TMC1-201ENST00000297784 FBLN2P98095 1184 aa10.31□□□□□ -0.76
TMC1-201ENST00000297784 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
TMC1-201ENST00000297784 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
TMC1-201ENST00000297784 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
TMC1-201ENST00000297784 UGGT2Q9NYU1 1516 aa10.28□□□□□ -0.76
TMC1-201ENST00000297784 FHOD3Q2V2M9 1422 aa10.27□□□□□ -0.76
TMC1-201ENST00000297784 DISP1Q96F81 1524 aa10.27□□□□□ -0.77
TMC1-201ENST00000297784 LRRIQ1Q96JM4 1722 aa10.24□□□□□ -0.77
TMC1-201ENST00000297784 KIAA0556O60303 1618 aa10.23□□□□□ -0.77
TMC1-201ENST00000297784 PCF11O94913 1555 aaKnown RBP10.23□□□□□ -0.77
TMC1-201ENST00000297784 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
TMC1-201ENST00000297784 SHROOM2Q13796 1616 aa10.21□□□□□ -0.77
TMC1-201ENST00000297784 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.78
TMC1-201ENST00000297784 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
TMC1-201ENST00000297784 KANK4Q5T7N3 995 aaPredicted RBP10.19□□□□□ -0.78
TMC1-201ENST00000297784 CASKIN1Q8WXD9 1431 aa10.19□□□□□ -0.78
TMC1-201ENST00000297784 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
TMC1-201ENST00000297784 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
TMC1-201ENST00000297784 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
TMC1-201ENST00000297784 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
TMC1-201ENST00000297784 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
TMC1-201ENST00000297784 CFAP43Q8NDM7 1665 aa10.16□□□□□ -0.78
TMC1-201ENST00000297784 PRG4Q92954 1404 aaPredicted RBP10.16□□□□□ -0.78
TMC1-201ENST00000297784 MAP3K1Q13233 1512 aa10.15□□□□□ -0.78
TMC1-201ENST00000297784 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
TMC1-201ENST00000297784 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
TMC1-201ENST00000297784 ACIN1Q9UKV3 1341 aaKnown RBP10.12□□□□□ -0.79
TMC1-201ENST00000297784 LRRC9Q6ZRR7 1453 aa10.12□□□□□ -0.79
TMC1-201ENST00000297784 RAPGEF6Q8TEU7 1601 aa10.12□□□□□ -0.79
TMC1-201ENST00000297784 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
TMC1-201ENST00000297784 MAGI3Q5TCQ9 1506 aa10.11□□□□□ -0.79
TMC1-201ENST00000297784 APLP2Q06481 763 aa10.11□□□□□ -0.79
TMC1-201ENST00000297784 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
TMC1-201ENST00000297784 HECW1Q76N89 1606 aa10.1□□□□□ -0.79
TMC1-201ENST00000297784 EPRSP07814 1512 aaKnown RBP10.1□□□□□ -0.79
TMC1-201ENST00000297784 ABCA8O94911 1581 aa10.09□□□□□ -0.79
TMC1-201ENST00000297784 CDK13Q14004 1512 aaKnown RBP10.09□□□□□ -0.79
TMC1-201ENST00000297784 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
TMC1-201ENST00000297784 CCDC18Q5T9S5 1454 aa10.06□□□□□ -0.8
TMC1-201ENST00000297784 PTPRGP23470 1445 aa10.06□□□□□ -0.8
TMC1-201ENST00000297784 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
TMC1-201ENST00000297784 PHLDB1Q86UU1 1377 aa10.04□□□□□ -0.8
TMC1-201ENST00000297784 ATP10BO94823 1461 aa10.03□□□□□ -0.8
TMC1-201ENST00000297784 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
TMC1-201ENST00000297784 UACAQ9BZF9 1416 aa10.02□□□□□ -0.81
TMC1-201ENST00000297784 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
TMC1-201ENST00000297784 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
TMC1-201ENST00000297784 EHBP1L1Q8N3D4 1523 aa10.01□□□□□ -0.81
TMC1-201ENST00000297784 SUPT6HQ7KZ85 1726 aaKnown RBP10□□□□□ -0.81
TMC1-201ENST00000297784 MTUS2Q5JR59 1369 aa10□□□□□ -0.81
TMC1-201ENST00000297784 ABCC2Q92887 1545 aa10□□□□□ -0.81
TMC1-201ENST00000297784 NCOA2Q15596 1464 aa10□□□□□ -0.81
TMC1-201ENST00000297784 ADCY10Q96PN6 1610 aa9.99□□□□□ -0.81
TMC1-201ENST00000297784 UHRF1BP1LA0JNW5 1464 aa9.98□□□□□ -0.81
TMC1-201ENST00000297784 CENPBP07199 599 aaPredicted RBP9.98□□□□□ -0.81
TMC1-201ENST00000297784 PHF23Q9BUL5 403 aaPredicted RBP9.98□□□□□ -0.81
TMC1-201ENST00000297784 KIF14Q15058 1648 aa9.98□□□□□ -0.81
TMC1-201ENST00000297784 ZCCHC11Q5TAX3 1644 aaKnown RBP9.97□□□□□ -0.81
TMC1-201ENST00000297784 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.81
TMC1-201ENST00000297784 KDM5BQ9UGL1 1544 aa9.96□□□□□ -0.82
TMC1-201ENST00000297784 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
TMC1-201ENST00000297784 TROQ12816 1431 aaPredicted RBP9.95□□□□□ -0.82
TMC1-201ENST00000297784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.95□□□□□ -0.82
TMC1-201ENST00000297784 HNRNPUL2Q1KMD3 747 aaKnown RBP9.95□□□□□ -0.82
TMC1-201ENST00000297784 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
TMC1-201ENST00000297784 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
TMC1-201ENST00000297784 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
TMC1-201ENST00000297784 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
TMC1-201ENST00000297784 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
TMC1-201ENST00000297784 ABCC10Q5T3U5 1492 aa9.92□□□□□ -0.82
TMC1-201ENST00000297784 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
TMC1-201ENST00000297784 CDC42BPAQ5VT25 1732 aa9.92□□□□□ -0.82
TMC1-201ENST00000297784 PTPN23Q9H3S7 1636 aa9.91□□□□□ -0.82
TMC1-201ENST00000297784 PLEKHD1A6NEE1 506 aa9.91□□□□□ -0.82
TMC1-201ENST00000297784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMC1-201ENST00000297784 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
TMC1-201ENST00000297784 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
TMC1-201ENST00000297784 PTPRKQ15262 1439 aa9.89□□□□□ -0.83
TMC1-201ENST00000297784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.89□□□□□ -0.83
TMC1-201ENST00000297784 TTC37Q6PGP7 1564 aa9.89□□□□□ -0.83
TMC1-201ENST00000297784 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
TMC1-201ENST00000297784 MIA2Q96PC5 1412 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms