RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
TMEM200A-201ENST00000296978 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
TMEM200A-201ENST00000296978 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
TMEM200A-201ENST00000296978 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
TMEM200A-201ENST00000296978 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
TMEM200A-201ENST00000296978 RBM19Q9Y4C8 960 aaKnown RBP17.54■□□□□ 0.4
TMEM200A-201ENST00000296978 CUX2O14529 1486 aa17.51■□□□□ 0.39
TMEM200A-201ENST00000296978 FAM9BQ8IZU0 186 aa17.49■□□□□ 0.39
TMEM200A-201ENST00000296978 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
TMEM200A-201ENST00000296978 PPP1R15AO75807 674 aaPredicted RBP17.46■□□□□ 0.39
TMEM200A-201ENST00000296978 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
TMEM200A-201ENST00000296978 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.38
TMEM200A-201ENST00000296978 PRXQ9BXM0 1461 aa17.46■□□□□ 0.38
TMEM200A-201ENST00000296978 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
TMEM200A-201ENST00000296978 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
TMEM200A-201ENST00000296978 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
TMEM200A-201ENST00000296978 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
TMEM200A-201ENST00000296978 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
TMEM200A-201ENST00000296978 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
TMEM200A-201ENST00000296978 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
TMEM200A-201ENST00000296978 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
TMEM200A-201ENST00000296978 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
TMEM200A-201ENST00000296978 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
TMEM200A-201ENST00000296978 IGF1RP08069 1367 aa17.35■□□□□ 0.37
TMEM200A-201ENST00000296978 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
TMEM200A-201ENST00000296978 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
TMEM200A-201ENST00000296978 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
TMEM200A-201ENST00000296978 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
TMEM200A-201ENST00000296978 CUX1P39880 1505 aa17.32■□□□□ 0.36
TMEM200A-201ENST00000296978 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM200A-201ENST00000296978 B4GALNT3Q6L9W6 998 aa17.3■□□□□ 0.36
TMEM200A-201ENST00000296978 FOXD1Q16676 465 aa17.29■□□□□ 0.36
TMEM200A-201ENST00000296978 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
TMEM200A-201ENST00000296978 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.36
TMEM200A-201ENST00000296978 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
TMEM200A-201ENST00000296978 FBLN2P98095 1184 aa17.27■□□□□ 0.35
TMEM200A-201ENST00000296978 NBR1Q14596 966 aa17.25■□□□□ 0.35
TMEM200A-201ENST00000296978 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
TMEM200A-201ENST00000296978 NESP48681 1621 aa17.24■□□□□ 0.35
TMEM200A-201ENST00000296978 MAPKBP1O60336 1514 aa17.23■□□□□ 0.35
TMEM200A-201ENST00000296978 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
TMEM200A-201ENST00000296978 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
TMEM200A-201ENST00000296978 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
TMEM200A-201ENST00000296978 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
TMEM200A-201ENST00000296978 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
TMEM200A-201ENST00000296978 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
TMEM200A-201ENST00000296978 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
TMEM200A-201ENST00000296978 NPM2Q86SE8 214 aaKnown RBP17.15■□□□□ 0.34
TMEM200A-201ENST00000296978 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
TMEM200A-201ENST00000296978 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
TMEM200A-201ENST00000296978 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
TMEM200A-201ENST00000296978 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
TMEM200A-201ENST00000296978 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
TMEM200A-201ENST00000296978 L3MBTL2Q969R5 705 aa17.13■□□□□ 0.33
TMEM200A-201ENST00000296978 CFTRP13569 1480 aa17.13■□□□□ 0.33
TMEM200A-201ENST00000296978 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
TMEM200A-201ENST00000296978 MSH5O43196 834 aa17.12■□□□□ 0.33
TMEM200A-201ENST00000296978 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
TMEM200A-201ENST00000296978 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
TMEM200A-201ENST00000296978 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
TMEM200A-201ENST00000296978 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
TMEM200A-201ENST00000296978 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.33
TMEM200A-201ENST00000296978 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.33
TMEM200A-201ENST00000296978 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
TMEM200A-201ENST00000296978 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
TMEM200A-201ENST00000296978 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
TMEM200A-201ENST00000296978 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
TMEM200A-201ENST00000296978 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
TMEM200A-201ENST00000296978 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
TMEM200A-201ENST00000296978 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
TMEM200A-201ENST00000296978 DEKP35659 375 aaKnown RBP17■□□□□ 0.31
TMEM200A-201ENST00000296978 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
TMEM200A-201ENST00000296978 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
TMEM200A-201ENST00000296978 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
TMEM200A-201ENST00000296978 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
TMEM200A-201ENST00000296978 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
TMEM200A-201ENST00000296978 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
TMEM200A-201ENST00000296978 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
TMEM200A-201ENST00000296978 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
TMEM200A-201ENST00000296978 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
TMEM200A-201ENST00000296978 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
TMEM200A-201ENST00000296978 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
TMEM200A-201ENST00000296978 NAIPQ13075 1403 aa16.93■□□□□ 0.3
TMEM200A-201ENST00000296978 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
TMEM200A-201ENST00000296978 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
TMEM200A-201ENST00000296978 NBPF8Q3BBV2 869 aa16.92■□□□□ 0.3
TMEM200A-201ENST00000296978 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
TMEM200A-201ENST00000296978 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
TMEM200A-201ENST00000296978 CCDC7Q96M83 1385 aa16.91■□□□□ 0.3
TMEM200A-201ENST00000296978 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
TMEM200A-201ENST00000296978 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
TMEM200A-201ENST00000296978 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.3
TMEM200A-201ENST00000296978 ZNF644Q9H582 1327 aaPredicted RBP16.89■□□□□ 0.29
TMEM200A-201ENST00000296978 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
TMEM200A-201ENST00000296978 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
TMEM200A-201ENST00000296978 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
TMEM200A-201ENST00000296978 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
TMEM200A-201ENST00000296978 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
TMEM200A-201ENST00000296978 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
TMEM200A-201ENST00000296978 PKD2Q13563 968 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms