RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 CEP164Q9UPV0 1460 aa4.49□□□□□ -1.69
CREBRF-201ENST00000296953 PRDM4Q9UKN5 801 aa4.49□□□□□ -1.69
CREBRF-201ENST00000296953 RSPH6AQ9H0K4 717 aa4.49□□□□□ -1.69
CREBRF-201ENST00000296953 ERICH3Q5RHP9 1530 aa4.49□□□□□ -1.69
CREBRF-201ENST00000296953 GOLGA3Q08378 1498 aa4.49□□□□□ -1.69
CREBRF-201ENST00000296953 CDK13Q14004 1512 aaKnown RBP4.49□□□□□ -1.69
CREBRF-201ENST00000296953 BAZ1AQ9NRL2 1556 aaPredicted RBP4.48□□□□□ -1.69
CREBRF-201ENST00000296953 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
CREBRF-201ENST00000296953 MAGI3Q5TCQ9 1506 aa4.48□□□□□ -1.69
CREBRF-201ENST00000296953 DHX29Q7Z478 1369 aaKnown RBP4.48□□□□□ -1.69
CREBRF-201ENST00000296953 SPATA31E1Q6ZUB1 1445 aa4.46□□□□□ -1.69
CREBRF-201ENST00000296953 RAPGEF2Q9Y4G8 1499 aa4.46□□□□□ -1.7
CREBRF-201ENST00000296953 ANP32EQ9BTT0 268 aa4.46□□□□□ -1.7
CREBRF-201ENST00000296953 POLA1P09884 1462 aaPredicted RBP4.46□□□□□ -1.7
CREBRF-201ENST00000296953 PABPN1Q86U42 306 aaKnown RBP eCLIP4.45□□□□□ -1.7
CREBRF-201ENST00000296953 PRDM15P57071 1507 aaPredicted RBP4.44□□□□□ -1.7
CREBRF-201ENST00000296953 ATP7AQ04656 1500 aa4.44□□□□□ -1.7
CREBRF-201ENST00000296953 EPRSP07814 1512 aaKnown RBP4.44□□□□□ -1.7
CREBRF-201ENST00000296953 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
CREBRF-201ENST00000296953 CLASP1Q7Z460 1538 aa4.43□□□□□ -1.7
CREBRF-201ENST00000296953 COL17A1Q9UMD9 1497 aaPredicted RBP4.43□□□□□ -1.7
CREBRF-201ENST00000296953 PCGF6Q9BYE7 350 aa4.43□□□□□ -1.7
CREBRF-201ENST00000296953 PRXQ9BXM0 1461 aa4.43□□□□□ -1.7
CREBRF-201ENST00000296953 RSF1Q96T23 1441 aaPredicted RBP4.43□□□□□ -1.7
CREBRF-201ENST00000296953 CFAP43Q8NDM7 1665 aa4.43□□□□□ -1.7
CREBRF-201ENST00000296953 MYOM2P54296 1465 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 DNMBPQ6XZF7 1577 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 KLHL34Q8N239 644 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 NLRP1Q9C000 1473 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.42□□□□□ -1.7
CREBRF-201ENST00000296953 BIVM-ERCC5R4GMW8 1640 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 NEFLP07196 543 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 TIMELESSQ9UNS1 1208 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 MAGI1Q96QZ7 1491 aaPredicted RBP4.42□□□□□ -1.7
CREBRF-201ENST00000296953 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
CREBRF-201ENST00000296953 MBD5Q9P267 1494 aa4.41□□□□□ -1.7
CREBRF-201ENST00000296953 SUPT5HO00267 1087 aaKnown RBP4.41□□□□□ -1.7
CREBRF-201ENST00000296953 TSHZ2Q9NRE2 1034 aa4.41□□□□□ -1.7
CREBRF-201ENST00000296953 CTTNBP2Q8WZ74 1663 aa4.41□□□□□ -1.7
CREBRF-201ENST00000296953 ARID4BQ4LE39 1312 aaPredicted RBP4.41□□□□□ -1.7
CREBRF-201ENST00000296953 ABCC10Q5T3U5 1492 aa4.4□□□□□ -1.7
CREBRF-201ENST00000296953 ABCC2Q92887 1545 aa4.4□□□□□ -1.7
CREBRF-201ENST00000296953 SOGA1O94964 1423 aa4.39□□□□□ -1.71
CREBRF-201ENST00000296953 TERF1P54274 439 aa4.39□□□□□ -1.71
CREBRF-201ENST00000296953 NEUROD1Q13562 356 aa4.39□□□□□ -1.71
CREBRF-201ENST00000296953 ATAD2BQ9ULI0 1458 aa4.39□□□□□ -1.71
CREBRF-201ENST00000296953 PREX2Q70Z35 1606 aa4.38□□□□□ -1.71
CREBRF-201ENST00000296953 NCOA3Q9Y6Q9 1424 aa4.37□□□□□ -1.71
CREBRF-201ENST00000296953 TRPM1Q7Z4N2 1603 aa4.37□□□□□ -1.71
CREBRF-201ENST00000296953 TNIKQ9UKE5 1360 aa4.37□□□□□ -1.71
CREBRF-201ENST00000296953 MSH5O43196 834 aa4.36□□□□□ -1.71
CREBRF-201ENST00000296953 SAMD9Q5K651 1589 aa4.36□□□□□ -1.71
CREBRF-201ENST00000296953 FBXO3Q9UK99 471 aa4.36□□□□□ -1.71
CREBRF-201ENST00000296953 CC2D2AQ9P2K1 1620 aa4.35□□□□□ -1.71
CREBRF-201ENST00000296953 RTL1A6NKG5 1358 aa4.35□□□□□ -1.71
CREBRF-201ENST00000296953 AQRO60306 1485 aaKnown RBP eCLIP4.35□□□□□ -1.71
CREBRF-201ENST00000296953 MIA2Q96PC5 1412 aa4.35□□□□□ -1.71
CREBRF-201ENST00000296953 KDRP35968 1356 aa4.35□□□□□ -1.71
CREBRF-201ENST00000296953 KDM5DQ9BY66 1539 aa4.34□□□□□ -1.71
CREBRF-201ENST00000296953 SYNMO15061 1565 aa4.34□□□□□ -1.71
CREBRF-201ENST00000296953 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.34□□□□□ -1.71
CREBRF-201ENST00000296953 TUBGCP6Q96RT7 1819 aa4.34□□□□□ -1.71
CREBRF-201ENST00000296953 SLX1AQ9BQ83 275 aa4.34□□□□□ -1.72
CREBRF-201ENST00000296953 PHLDB1Q86UU1 1377 aa4.34□□□□□ -1.72
CREBRF-201ENST00000296953 COL22A1Q8NFW1 1626 aaPredicted RBP4.34□□□□□ -1.72
CREBRF-201ENST00000296953 FYCO1Q9BQS8 1478 aa4.33□□□□□ -1.72
CREBRF-201ENST00000296953 RTEL1-TNFRSF6BF6WH68 1400 aa4.33□□□□□ -1.72
CREBRF-201ENST00000296953 EHMT2Q96KQ7 1210 aa4.33□□□□□ -1.72
CREBRF-201ENST00000296953 KIF14Q15058 1648 aa4.33□□□□□ -1.72
CREBRF-201ENST00000296953 EFCAB6Q5THR3 1501 aa4.32□□□□□ -1.72
CREBRF-201ENST00000296953 ZNF316A6NFI3 1004 aaPredicted RBP4.31□□□□□ -1.72
CREBRF-201ENST00000296953 ZNF608Q9ULD9 1512 aaPredicted RBP4.31□□□□□ -1.72
CREBRF-201ENST00000296953 DIEXFQ68CQ4 756 aaKnown RBP4.31□□□□□ -1.72
CREBRF-201ENST00000296953 FAM135AQ9P2D6 1515 aa4.31□□□□□ -1.72
CREBRF-201ENST00000296953 GLIPR1L2Q4G1C9 344 aa4.31□□□□□ -1.72
CREBRF-201ENST00000296953 SETD5Q9C0A6 1442 aa4.31□□□□□ -1.72
CREBRF-201ENST00000296953 LRPPRCP42704 1394 aaKnown RBP4.31□□□□□ -1.72
CREBRF-201ENST00000296953 LSM14AQ8ND56 463 aaKnown RBP4.31□□□□□ -1.72
CREBRF-201ENST00000296953 DBX2Q6ZNG2 339 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 AAMPQ13685 434 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 PHF23Q9BUL5 403 aaPredicted RBP4.3□□□□□ -1.72
CREBRF-201ENST00000296953 CCDC18Q5T9S5 1454 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 TSGA10IPQ3SY00 556 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 FAM53CQ9NYF3 392 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 KDM5AP29375 1690 aaKnown RBP4.3□□□□□ -1.72
CREBRF-201ENST00000296953 TEX14Q8IWB6 1497 aa4.3□□□□□ -1.72
CREBRF-201ENST00000296953 GCC2Q8IWJ2 1684 aa4.29□□□□□ -1.72
CREBRF-201ENST00000296953 SOS1Q07889 1333 aaPredicted RBP4.29□□□□□ -1.72
CREBRF-201ENST00000296953 ABCC3O15438 1527 aa4.29□□□□□ -1.72
CREBRF-201ENST00000296953 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 RNF216Q9NWF9 866 aaPredicted RBP4.28□□□□□ -1.72
CREBRF-201ENST00000296953 URB2Q14146 1524 aaKnown RBP4.28□□□□□ -1.72
CREBRF-201ENST00000296953 IL17RAQ96F46 866 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 GRIPAP1Q4V328 841 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 PLPPR3Q6T4P5 718 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 PTPRUQ92729 1446 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 PLB1Q6P1J6 1458 aa4.28□□□□□ -1.72
CREBRF-201ENST00000296953 CLEC17AQ6ZS10 378 aa4.28□□□□□ -1.73
CREBRF-201ENST00000296953 CNKSR2Q8WXI2 1034 aa4.28□□□□□ -1.73
CREBRF-201ENST00000296953 PLXNC1O60486 1568 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms