RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
CAGE1-201ENST00000296742 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
CAGE1-201ENST00000296742 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
CAGE1-201ENST00000296742 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
CAGE1-201ENST00000296742 ITGAEP38570 1179 aa18.27■□□□□ 0.51
CAGE1-201ENST00000296742 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
CAGE1-201ENST00000296742 BCL11AQ9H165 835 aa18.22■□□□□ 0.51
CAGE1-201ENST00000296742 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
CAGE1-201ENST00000296742 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
CAGE1-201ENST00000296742 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
CAGE1-201ENST00000296742 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
CAGE1-201ENST00000296742 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
CAGE1-201ENST00000296742 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
CAGE1-201ENST00000296742 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
CAGE1-201ENST00000296742 CLSPNQ9HAW4 1339 aa18.08■□□□□ 0.48
CAGE1-201ENST00000296742 CUL7Q14999 1698 aa18.07■□□□□ 0.48
CAGE1-201ENST00000296742 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
CAGE1-201ENST00000296742 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
CAGE1-201ENST00000296742 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
CAGE1-201ENST00000296742 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
CAGE1-201ENST00000296742 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
CAGE1-201ENST00000296742 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
CAGE1-201ENST00000296742 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
CAGE1-201ENST00000296742 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
CAGE1-201ENST00000296742 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
CAGE1-201ENST00000296742 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
CAGE1-201ENST00000296742 ARID3CA6NKF2 412 aa18.02■□□□□ 0.47
CAGE1-201ENST00000296742 LRRC9Q6ZRR7 1453 aa18.02■□□□□ 0.47
CAGE1-201ENST00000296742 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
CAGE1-201ENST00000296742 CTTNBP2Q8WZ74 1663 aa18■□□□□ 0.47
CAGE1-201ENST00000296742 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
CAGE1-201ENST00000296742 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
CAGE1-201ENST00000296742 BCANQ96GW7 911 aa17.93■□□□□ 0.46
CAGE1-201ENST00000296742 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
CAGE1-201ENST00000296742 CASKIN1Q8WXD9 1431 aa17.93■□□□□ 0.46
CAGE1-201ENST00000296742 FBLN2P98095 1184 aa17.91■□□□□ 0.46
CAGE1-201ENST00000296742 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
CAGE1-201ENST00000296742 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
CAGE1-201ENST00000296742 MAP3K1Q13233 1512 aa17.9■□□□□ 0.46
CAGE1-201ENST00000296742 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
CAGE1-201ENST00000296742 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
CAGE1-201ENST00000296742 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
CAGE1-201ENST00000296742 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
CAGE1-201ENST00000296742 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
CAGE1-201ENST00000296742 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
CAGE1-201ENST00000296742 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
CAGE1-201ENST00000296742 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
CAGE1-201ENST00000296742 WDR62O43379 1518 aa17.84■□□□□ 0.45
CAGE1-201ENST00000296742 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
CAGE1-201ENST00000296742 LRRIQ1Q96JM4 1722 aa17.8■□□□□ 0.44
CAGE1-201ENST00000296742 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
CAGE1-201ENST00000296742 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
CAGE1-201ENST00000296742 FKBP8Q14318 412 aa17.77■□□□□ 0.44
CAGE1-201ENST00000296742 KCNH8Q96L42 1107 aa17.77■□□□□ 0.44
CAGE1-201ENST00000296742 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.44
CAGE1-201ENST00000296742 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
CAGE1-201ENST00000296742 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
CAGE1-201ENST00000296742 FGD6Q6ZV73 1430 aa17.74■□□□□ 0.43
CAGE1-201ENST00000296742 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
CAGE1-201ENST00000296742 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
CAGE1-201ENST00000296742 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
CAGE1-201ENST00000296742 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
CAGE1-201ENST00000296742 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
CAGE1-201ENST00000296742 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
CAGE1-201ENST00000296742 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
CAGE1-201ENST00000296742 PTPRKQ15262 1439 aa17.7■□□□□ 0.42
CAGE1-201ENST00000296742 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
CAGE1-201ENST00000296742 RRP7BPQ9NSQ0 103 aa17.67■□□□□ 0.42
CAGE1-201ENST00000296742 EPRSP07814 1512 aaKnown RBP17.66■□□□□ 0.42
CAGE1-201ENST00000296742 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
CAGE1-201ENST00000296742 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
CAGE1-201ENST00000296742 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
CAGE1-201ENST00000296742 NEFLP07196 543 aa17.63■□□□□ 0.41
CAGE1-201ENST00000296742 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
CAGE1-201ENST00000296742 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
CAGE1-201ENST00000296742 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
CAGE1-201ENST00000296742 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
CAGE1-201ENST00000296742 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
CAGE1-201ENST00000296742 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
CAGE1-201ENST00000296742 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
CAGE1-201ENST00000296742 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
CAGE1-201ENST00000296742 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
CAGE1-201ENST00000296742 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
CAGE1-201ENST00000296742 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.41
CAGE1-201ENST00000296742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.4
CAGE1-201ENST00000296742 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
CAGE1-201ENST00000296742 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
CAGE1-201ENST00000296742 MSH5O43196 834 aa17.56■□□□□ 0.4
CAGE1-201ENST00000296742 PTPN23Q9H3S7 1636 aa17.55■□□□□ 0.4
CAGE1-201ENST00000296742 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
CAGE1-201ENST00000296742 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
CAGE1-201ENST00000296742 NAIPQ13075 1403 aa17.53■□□□□ 0.4
CAGE1-201ENST00000296742 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
CAGE1-201ENST00000296742 HFM1A2PYH4 1435 aa17.51■□□□□ 0.39
CAGE1-201ENST00000296742 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
CAGE1-201ENST00000296742 ARHGEF11O15085 1522 aa17.51■□□□□ 0.39
CAGE1-201ENST00000296742 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
CAGE1-201ENST00000296742 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
CAGE1-201ENST00000296742 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
CAGE1-201ENST00000296742 RAPGEF6Q8TEU7 1601 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms