RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TIAM1Q13009 1591 aa17.52■□□□□ 0.4
RHO-201ENST00000296271 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
RHO-201ENST00000296271 PCF11O94913 1555 aaKnown RBP17.52■□□□□ 0.39
RHO-201ENST00000296271 PHLDB1Q86UU1 1377 aa17.5■□□□□ 0.39
RHO-201ENST00000296271 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
RHO-201ENST00000296271 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
RHO-201ENST00000296271 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
RHO-201ENST00000296271 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
RHO-201ENST00000296271 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
RHO-201ENST00000296271 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
RHO-201ENST00000296271 CUL7Q14999 1698 aa17.44■□□□□ 0.38
RHO-201ENST00000296271 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
RHO-201ENST00000296271 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
RHO-201ENST00000296271 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
RHO-201ENST00000296271 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
RHO-201ENST00000296271 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
RHO-201ENST00000296271 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
RHO-201ENST00000296271 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
RHO-201ENST00000296271 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
RHO-201ENST00000296271 MIER1Q8N108 512 aa17.36■□□□□ 0.37
RHO-201ENST00000296271 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
RHO-201ENST00000296271 ARID3CA6NKF2 412 aa17.35■□□□□ 0.37
RHO-201ENST00000296271 EFCAB5A4FU69 1503 aa17.34■□□□□ 0.37
RHO-201ENST00000296271 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
RHO-201ENST00000296271 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
RHO-201ENST00000296271 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.36
RHO-201ENST00000296271 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
RHO-201ENST00000296271 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
RHO-201ENST00000296271 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
RHO-201ENST00000296271 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
RHO-201ENST00000296271 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
RHO-201ENST00000296271 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
RHO-201ENST00000296271 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
RHO-201ENST00000296271 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
RHO-201ENST00000296271 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
RHO-201ENST00000296271 MAPKBP1O60336 1514 aa17.27■□□□□ 0.35
RHO-201ENST00000296271 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
RHO-201ENST00000296271 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
RHO-201ENST00000296271 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
RHO-201ENST00000296271 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
RHO-201ENST00000296271 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
RHO-201ENST00000296271 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
RHO-201ENST00000296271 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
RHO-201ENST00000296271 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
RHO-201ENST00000296271 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
RHO-201ENST00000296271 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
RHO-201ENST00000296271 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
RHO-201ENST00000296271 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
RHO-201ENST00000296271 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
RHO-201ENST00000296271 WDR62O43379 1518 aa17.13■□□□□ 0.33
RHO-201ENST00000296271 FBLN2P98095 1184 aa17.12■□□□□ 0.33
RHO-201ENST00000296271 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
RHO-201ENST00000296271 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
RHO-201ENST00000296271 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
RHO-201ENST00000296271 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
RHO-201ENST00000296271 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
RHO-201ENST00000296271 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
RHO-201ENST00000296271 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
RHO-201ENST00000296271 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
RHO-201ENST00000296271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
RHO-201ENST00000296271 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
RHO-201ENST00000296271 UGGT2Q9NYU1 1516 aa17.05■□□□□ 0.32
RHO-201ENST00000296271 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
RHO-201ENST00000296271 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
RHO-201ENST00000296271 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
RHO-201ENST00000296271 NAIPQ13075 1403 aa17.03■□□□□ 0.32
RHO-201ENST00000296271 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
RHO-201ENST00000296271 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
RHO-201ENST00000296271 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
RHO-201ENST00000296271 HECW1Q76N89 1606 aa17.02■□□□□ 0.32
RHO-201ENST00000296271 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
RHO-201ENST00000296271 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
RHO-201ENST00000296271 ZNF644Q9H582 1327 aaPredicted RBP17■□□□□ 0.31
RHO-201ENST00000296271 KIAA0586Q9BVV6 1533 aa17■□□□□ 0.31
RHO-201ENST00000296271 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
RHO-201ENST00000296271 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
RHO-201ENST00000296271 KDM6BO15054 1643 aa16.97■□□□□ 0.31
RHO-201ENST00000296271 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
RHO-201ENST00000296271 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.31
RHO-201ENST00000296271 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
RHO-201ENST00000296271 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
RHO-201ENST00000296271 FOXD1Q16676 465 aa16.95■□□□□ 0.3
RHO-201ENST00000296271 TRIM52Q96A61 297 aa16.94■□□□□ 0.3
RHO-201ENST00000296271 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
RHO-201ENST00000296271 PLB1Q6P1J6 1458 aa16.94■□□□□ 0.3
RHO-201ENST00000296271 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
RHO-201ENST00000296271 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
RHO-201ENST00000296271 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
RHO-201ENST00000296271 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
RHO-201ENST00000296271 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
RHO-201ENST00000296271 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
RHO-201ENST00000296271 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
RHO-201ENST00000296271 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
RHO-201ENST00000296271 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
RHO-201ENST00000296271 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
RHO-201ENST00000296271 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
RHO-201ENST00000296271 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
RHO-201ENST00000296271 ABCC5O15440 1437 aa16.82■□□□□ 0.28
RHO-201ENST00000296271 DAPK1P53355 1430 aa16.82■□□□□ 0.28
RHO-201ENST00000296271 NUP160Q12769 1436 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms