RNA–Protein interactions for RNA: ENST00000295926.7

CCNL1-202, Transcript of cyclin L1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNL1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-202ENST00000295926 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
CCNL1-202ENST00000295926 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
CCNL1-202ENST00000295926 MAP3K1Q13233 1512 aa22.3■■□□□ 1.16
CCNL1-202ENST00000295926 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
CCNL1-202ENST00000295926 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
CCNL1-202ENST00000295926 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
CCNL1-202ENST00000295926 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
CCNL1-202ENST00000295926 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
CCNL1-202ENST00000295926 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
CCNL1-202ENST00000295926 FAM50AQ14320 339 aaKnown RBP22.23■■□□□ 1.15
CCNL1-202ENST00000295926 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
CCNL1-202ENST00000295926 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.15
CCNL1-202ENST00000295926 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
CCNL1-202ENST00000295926 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
CCNL1-202ENST00000295926 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.13
CCNL1-202ENST00000295926 CUL7Q14999 1698 aa22.13■■□□□ 1.13
CCNL1-202ENST00000295926 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
CCNL1-202ENST00000295926 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
CCNL1-202ENST00000295926 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
CCNL1-202ENST00000295926 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
CCNL1-202ENST00000295926 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
CCNL1-202ENST00000295926 FYCO1Q9BQS8 1478 aa22.1■■□□□ 1.13
CCNL1-202ENST00000295926 CASKIN1Q8WXD9 1431 aa22.1■■□□□ 1.13
CCNL1-202ENST00000295926 CTTNBP2Q8WZ74 1663 aa22.07■■□□□ 1.12
CCNL1-202ENST00000295926 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.123e-8■■■■■ 39.2
CCNL1-202ENST00000295926 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
CCNL1-202ENST00000295926 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
CCNL1-202ENST00000295926 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
CCNL1-202ENST00000295926 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
CCNL1-202ENST00000295926 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
CCNL1-202ENST00000295926 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
CCNL1-202ENST00000295926 SNAPC4Q5SXM2 1469 aa21.97■■□□□ 1.11
CCNL1-202ENST00000295926 MTUS2Q5JR59 1369 aa21.97■■□□□ 1.11
CCNL1-202ENST00000295926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.12e-9■□□□□ 10.1
CCNL1-202ENST00000295926 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
CCNL1-202ENST00000295926 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
CCNL1-202ENST00000295926 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
CCNL1-202ENST00000295926 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
CCNL1-202ENST00000295926 LRRIQ1Q96JM4 1722 aa21.85■■□□□ 1.09
CCNL1-202ENST00000295926 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
CCNL1-202ENST00000295926 NCOA2Q15596 1464 aa21.83■■□□□ 1.09
CCNL1-202ENST00000295926 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.09
CCNL1-202ENST00000295926 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
CCNL1-202ENST00000295926 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
CCNL1-202ENST00000295926 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
CCNL1-202ENST00000295926 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
CCNL1-202ENST00000295926 CCDC18Q5T9S5 1454 aa21.79■■□□□ 1.08
CCNL1-202ENST00000295926 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
CCNL1-202ENST00000295926 HIRIP3Q9BW71 556 aaPredicted RBP21.79■■□□□ 1.08
CCNL1-202ENST00000295926 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
CCNL1-202ENST00000295926 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
CCNL1-202ENST00000295926 SUPT6HQ7KZ85 1726 aaKnown RBP21.74■■□□□ 1.07
CCNL1-202ENST00000295926 EHBP1L1Q8N3D4 1523 aa21.74■■□□□ 1.07
CCNL1-202ENST00000295926 PTPN23Q9H3S7 1636 aa21.73■■□□□ 1.07
CCNL1-202ENST00000295926 NAIPQ13075 1403 aa21.73■■□□□ 1.07
CCNL1-202ENST00000295926 UACAQ9BZF9 1416 aa21.73■■□□□ 1.07
CCNL1-202ENST00000295926 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
CCNL1-202ENST00000295926 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
CCNL1-202ENST00000295926 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
CCNL1-202ENST00000295926 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
CCNL1-202ENST00000295926 CHIC2Q9UKJ5 165 aa21.69■■□□□ 1.06
CCNL1-202ENST00000295926 UGGT2Q9NYU1 1516 aa21.69■■□□□ 1.06
CCNL1-202ENST00000295926 RRP7BPQ9NSQ0 103 aa21.68■■□□□ 1.06
CCNL1-202ENST00000295926 IQGAP2Q13576 1575 aa21.68■■□□□ 1.06
CCNL1-202ENST00000295926 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
CCNL1-202ENST00000295926 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
CCNL1-202ENST00000295926 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
CCNL1-202ENST00000295926 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
CCNL1-202ENST00000295926 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
CCNL1-202ENST00000295926 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
CCNL1-202ENST00000295926 CDK13Q14004 1512 aaKnown RBP21.62■■□□□ 1.05
CCNL1-202ENST00000295926 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
CCNL1-202ENST00000295926 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
CCNL1-202ENST00000295926 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
CCNL1-202ENST00000295926 WDR62O43379 1518 aa21.55■■□□□ 1.04
CCNL1-202ENST00000295926 ANP32CO43423 234 aa21.53■■□□□ 1.04
CCNL1-202ENST00000295926 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
CCNL1-202ENST00000295926 MIA2Q96PC5 1412 aa21.51■■□□□ 1.03
CCNL1-202ENST00000295926 KDM6BO15054 1643 aa21.49■■□□□ 1.03
CCNL1-202ENST00000295926 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
CCNL1-202ENST00000295926 DENND4BO75064 1496 aaPredicted RBP21.48■■□□□ 1.03
CCNL1-202ENST00000295926 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
CCNL1-202ENST00000295926 GCC2Q8IWJ2 1684 aa21.47■■□□□ 1.03
CCNL1-202ENST00000295926 MPHOSPH9Q99550 1183 aa21.47■■□□□ 1.03
CCNL1-202ENST00000295926 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
CCNL1-202ENST00000295926 CCER2I3L3R5 266 aa21.46■■□□□ 1.03
CCNL1-202ENST00000295926 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
CCNL1-202ENST00000295926 FOXD1Q16676 465 aa21.45■■□□□ 1.02
CCNL1-202ENST00000295926 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
CCNL1-202ENST00000295926 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CCNL1-202ENST00000295926 NUP153P49790 1475 aaKnown RBP21.42■■□□□ 1.02
CCNL1-202ENST00000295926 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
CCNL1-202ENST00000295926 DAPK1P53355 1430 aa21.39■■□□□ 1.01
CCNL1-202ENST00000295926 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.01
CCNL1-202ENST00000295926 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
CCNL1-202ENST00000295926 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
CCNL1-202ENST00000295926 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
CCNL1-202ENST00000295926 L3MBTL2Q969R5 705 aa21.37■■□□□ 1.01
CCNL1-202ENST00000295926 FBLN2P98095 1184 aa21.37■■□□□ 1.01
CCNL1-202ENST00000295926 ABCC5O15440 1437 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms