RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 SPINK5Q9NQ38 1064 aaPredicted RBP7.22□□□□□ -1.25
PPP1R9A-201ENST00000289495 ARAP1Q96P48 1450 aa7.22□□□□□ -1.25
PPP1R9A-201ENST00000289495 FGD5Q6ZNL6 1462 aa7.21□□□□□ -1.25
PPP1R9A-201ENST00000289495 FANCD2Q9BXW9 1451 aa7.2□□□□□ -1.26
PPP1R9A-201ENST00000289495 ATF5Q9Y2D1 282 aaPredicted RBP7.2□□□□□ -1.26
PPP1R9A-201ENST00000289495 DIEXFQ68CQ4 756 aaKnown RBP7.19□□□□□ -1.26
PPP1R9A-201ENST00000289495 CARMIL1Q5VZK9 1371 aa7.19□□□□□ -1.26
PPP1R9A-201ENST00000289495 TRHP20396 242 aaPredicted RBP7.17□□□□□ -1.26
PPP1R9A-201ENST00000289495 ARHGAP35Q9NRY4 1499 aa7.17□□□□□ -1.26
PPP1R9A-201ENST00000289495 IGF1RP08069 1367 aa7.17□□□□□ -1.26
PPP1R9A-201ENST00000289495 DNMBPQ6XZF7 1577 aa7.16□□□□□ -1.26
PPP1R9A-201ENST00000289495 ZNF316A6NFI3 1004 aaPredicted RBP7.16□□□□□ -1.26
PPP1R9A-201ENST00000289495 RNF39Q9H2S5 420 aa7.16□□□□□ -1.26
PPP1R9A-201ENST00000289495 CENPBP07199 599 aaPredicted RBP7.15□□□□□ -1.26
PPP1R9A-201ENST00000289495 KANK4Q5T7N3 995 aaPredicted RBP7.14□□□□□ -1.27
PPP1R9A-201ENST00000289495 FHAD1B1AJZ9 1412 aa7.14□□□□□ -1.27
PPP1R9A-201ENST00000289495 ATP1B4Q9UN42 357 aaPredicted RBP7.14□□□□□ -1.27
PPP1R9A-201ENST00000289495 TOPBP1Q92547 1522 aa7.13□□□□□ -1.27
PPP1R9A-201ENST00000289495 CAPN15O75808 1086 aa7.13□□□□□ -1.27
PPP1R9A-201ENST00000289495 ABCB7O75027 752 aa7.13□□□□□ -1.27
PPP1R9A-201ENST00000289495 CCNB3Q8WWL7 1395 aa7.13□□□□□ -1.27
PPP1R9A-201ENST00000289495 CLSPNQ9HAW4 1339 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 POLA1P09884 1462 aaPredicted RBP7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 NESP48681 1621 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 ITGAEP38570 1179 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 RRBP1Q9P2E9 1410 aaKnown RBP7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 ABCA10Q8WWZ4 1543 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 LAMC3Q9Y6N6 1575 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 RAD54L2Q9Y4B4 1467 aa7.12□□□□□ -1.27
PPP1R9A-201ENST00000289495 CACNB1Q02641 598 aaPredicted RBP7.11□□□□□ -1.27
PPP1R9A-201ENST00000289495 CUL7Q14999 1698 aa7.11□□□□□ -1.27
PPP1R9A-201ENST00000289495 TIAM1Q13009 1591 aa7.11□□□□□ -1.27
PPP1R9A-201ENST00000289495 P3H3Q8IVL6 736 aa7.1□□□□□ -1.27
PPP1R9A-201ENST00000289495 PDS5BQ9NTI5 1447 aa7.1□□□□□ -1.27
PPP1R9A-201ENST00000289495 MAP3K1Q13233 1512 aa7.1□□□□□ -1.27
PPP1R9A-201ENST00000289495 EFCAB5A4FU69 1503 aa7.09□□□□□ -1.27
PPP1R9A-201ENST00000289495 MYCNP04198 464 aaPredicted RBP7.09□□□□□ -1.27
PPP1R9A-201ENST00000289495 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
PPP1R9A-201ENST00000289495 PCF11O94913 1555 aaKnown RBP7.08□□□□□ -1.28
PPP1R9A-201ENST00000289495 FHOD3Q2V2M9 1422 aa7.08□□□□□ -1.28
PPP1R9A-201ENST00000289495 FAM50AQ14320 339 aaKnown RBP7.08□□□□□ -1.28
PPP1R9A-201ENST00000289495 ACIN1Q9UKV3 1341 aaKnown RBP7.07□□□□□ -1.28
PPP1R9A-201ENST00000289495 LRRC9Q6ZRR7 1453 aa7.07□□□□□ -1.28
PPP1R9A-201ENST00000289495 CTTNBP2Q8WZ74 1663 aa7.07□□□□□ -1.28
PPP1R9A-201ENST00000289495 CFAP43Q8NDM7 1665 aa7.07□□□□□ -1.28
PPP1R9A-201ENST00000289495 URB2Q14146 1524 aaKnown RBP7.06□□□□□ -1.28
PPP1R9A-201ENST00000289495 FYCO1Q9BQS8 1478 aa7.06□□□□□ -1.28
PPP1R9A-201ENST00000289495 FMN1Q68DA7 1419 aa7.06□□□□□ -1.28
PPP1R9A-201ENST00000289495 DNAJC5BQ9UF47 199 aa7.05□□□□□ -1.28
PPP1R9A-201ENST00000289495 GAPVD1Q14C86 1478 aa7.05□□□□□ -1.28
PPP1R9A-201ENST00000289495 TDRD9Q8NDG6 1382 aaKnown RBP7.05□□□□□ -1.28
PPP1R9A-201ENST00000289495 YTHDC1Q96MU7 727 aaKnown RBP7.04□□□□□ -1.28
PPP1R9A-201ENST00000289495 CASKIN1Q8WXD9 1431 aa7.04□□□□□ -1.28
PPP1R9A-201ENST00000289495 WDR97A6NE52 1622 aa7.04□□□□□ -1.28
PPP1R9A-201ENST00000289495 MTUS2Q5JR59 1369 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 AQRO60306 1485 aaKnown RBP eCLIP7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 ABCA5Q8WWZ7 1642 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 SETD5Q9C0A6 1442 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 PHLDB1Q86UU1 1377 aa7.03□□□□□ -1.28
PPP1R9A-201ENST00000289495 KIF21AQ7Z4S6 1674 aa7.02□□□□□ -1.29
PPP1R9A-201ENST00000289495 MIER1Q8N108 512 aa7□□□□□ -1.29
PPP1R9A-201ENST00000289495 GTF3C3Q9Y5Q9 886 aa6.99□□□□□ -1.29
PPP1R9A-201ENST00000289495 MRC2Q9UBG0 1479 aa6.98□□□□□ -1.29
PPP1R9A-201ENST00000289495 SAMD9Q5K651 1589 aa6.98□□□□□ -1.29
PPP1R9A-201ENST00000289495 THOC2Q8NI27 1593 aaKnown RBP6.98□□□□□ -1.29
PPP1R9A-201ENST00000289495 FGD6Q6ZV73 1430 aa6.98□□□□□ -1.29
PPP1R9A-201ENST00000289495 PELP1Q8IZL8 1130 aaKnown RBP6.98□□□□□ -1.29
PPP1R9A-201ENST00000289495 SNAPC4Q5SXM2 1469 aa6.97□□□□□ -1.29
PPP1R9A-201ENST00000289495 POLA2Q14181 598 aa6.97□□□□□ -1.29
PPP1R9A-201ENST00000289495 EHBP1L1Q8N3D4 1523 aa6.97□□□□□ -1.29
PPP1R9A-201ENST00000289495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.97□□□□□ -1.29
PPP1R9A-201ENST00000289495 PBRM1Q86U86 1689 aa6.97□□□□□ -1.29
PPP1R9A-201ENST00000289495 TARBP1Q13395 1621 aaKnown RBP6.96□□□□□ -1.29
PPP1R9A-201ENST00000289495 C1QBPQ07021 282 aaKnown RBP6.96□□□□□ -1.29
PPP1R9A-201ENST00000289495 CCDC18Q5T9S5 1454 aa6.96□□□□□ -1.3
PPP1R9A-201ENST00000289495 SUPT6HQ7KZ85 1726 aaKnown RBP6.96□□□□□ -1.3
PPP1R9A-201ENST00000289495 HECW1Q76N89 1606 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 IQGAP2Q13576 1575 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 MAPKBP1O60336 1514 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 GRIN2BQ13224 1484 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 ADAMTS12P58397 1594 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 NCOA2Q15596 1464 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 MYOM3Q5VTT5 1437 aa6.95□□□□□ -1.3
PPP1R9A-201ENST00000289495 SAMD1Q6SPF0 538 aaPredicted RBP6.94□□□□□ -1.3
PPP1R9A-201ENST00000289495 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
PPP1R9A-201ENST00000289495 TIMELESSQ9UNS1 1208 aa6.93□□□□□ -1.3
PPP1R9A-201ENST00000289495 TONSLQ96HA7 1378 aa6.92□□□□□ -1.3
PPP1R9A-201ENST00000289495 ERCC6Q03468 1493 aa6.92□□□□□ -1.3
PPP1R9A-201ENST00000289495 SIN3AQ96ST3 1273 aa6.92□□□□□ -1.3
PPP1R9A-201ENST00000289495 HFM1A2PYH4 1435 aa6.91□□□□□ -1.3
PPP1R9A-201ENST00000289495 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.3
PPP1R9A-201ENST00000289495 ARID3CA6NKF2 412 aa6.9□□□□□ -1.3
PPP1R9A-201ENST00000289495 UGGT2Q9NYU1 1516 aa6.9□□□□□ -1.3
PPP1R9A-201ENST00000289495 UACAQ9BZF9 1416 aa6.9□□□□□ -1.31
PPP1R9A-201ENST00000289495 WDR62O43379 1518 aa6.89□□□□□ -1.31
PPP1R9A-201ENST00000289495 EPRSP07814 1512 aaKnown RBP6.89□□□□□ -1.31
PPP1R9A-201ENST00000289495 LRRIQ1Q96JM4 1722 aa6.89□□□□□ -1.31
PPP1R9A-201ENST00000289495 CDK11AQ9UQ88 783 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms