RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
VPS8-201ENST00000287546 MTUS2Q5JR59 1369 aa9.95□□□□□ -0.82
VPS8-201ENST00000287546 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
VPS8-201ENST00000287546 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
VPS8-201ENST00000287546 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
VPS8-201ENST00000287546 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
VPS8-201ENST00000287546 ZNF608Q9ULD9 1512 aaPredicted RBP9.94□□□□□ -0.82
VPS8-201ENST00000287546 DIEXFQ68CQ4 756 aaKnown RBP9.93□□□□□ -0.82
VPS8-201ENST00000287546 ABCA10Q8WWZ4 1543 aa9.92□□□□□ -0.82
VPS8-201ENST00000287546 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
VPS8-201ENST00000287546 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
VPS8-201ENST00000287546 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
VPS8-201ENST00000287546 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
VPS8-201ENST00000287546 ESF1Q9H501 851 aaKnown RBP9.9□□□□□ -0.82
VPS8-201ENST00000287546 BCANQ96GW7 911 aa9.9□□□□□ -0.82
VPS8-201ENST00000287546 CUL7Q14999 1698 aa9.89□□□□□ -0.83
VPS8-201ENST00000287546 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
VPS8-201ENST00000287546 WDR62O43379 1518 aa9.88□□□□□ -0.83
VPS8-201ENST00000287546 IFT140Q96RY7 1462 aa9.88□□□□□ -0.83
VPS8-201ENST00000287546 THOC2Q8NI27 1593 aaKnown RBP9.87□□□□□ -0.83
VPS8-201ENST00000287546 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
VPS8-201ENST00000287546 ARHGAP35Q9NRY4 1499 aa9.86□□□□□ -0.83
VPS8-201ENST00000287546 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
VPS8-201ENST00000287546 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
VPS8-201ENST00000287546 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
VPS8-201ENST00000287546 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
VPS8-201ENST00000287546 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
VPS8-201ENST00000287546 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
VPS8-201ENST00000287546 MAP3K1Q13233 1512 aa9.81□□□□□ -0.84
VPS8-201ENST00000287546 FYCO1Q9BQS8 1478 aa9.81□□□□□ -0.84
VPS8-201ENST00000287546 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
VPS8-201ENST00000287546 CASKIN1Q8WXD9 1431 aa9.8□□□□□ -0.84
VPS8-201ENST00000287546 TARBP1Q13395 1621 aaKnown RBP9.8□□□□□ -0.84
VPS8-201ENST00000287546 CARMIL2Q6F5E8 1435 aa9.8□□□□□ -0.84
VPS8-201ENST00000287546 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
VPS8-201ENST00000287546 SETD5Q9C0A6 1442 aa9.78□□□□□ -0.84
VPS8-201ENST00000287546 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
VPS8-201ENST00000287546 LRRC9Q6ZRR7 1453 aa9.78□□□□□ -0.84
VPS8-201ENST00000287546 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.84
VPS8-201ENST00000287546 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
VPS8-201ENST00000287546 TIAM1Q13009 1591 aa9.77□□□□□ -0.85
VPS8-201ENST00000287546 CCDC18Q5T9S5 1454 aa9.77□□□□□ -0.85
VPS8-201ENST00000287546 TONSLQ96HA7 1378 aa9.76□□□□□ -0.85
VPS8-201ENST00000287546 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
VPS8-201ENST00000287546 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
VPS8-201ENST00000287546 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
VPS8-201ENST00000287546 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
VPS8-201ENST00000287546 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
VPS8-201ENST00000287546 POLR3GLQ9BT43 218 aa9.73□□□□□ -0.85
VPS8-201ENST00000287546 CTTNBP2Q8WZ74 1663 aa9.72□□□□□ -0.85
VPS8-201ENST00000287546 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
VPS8-201ENST00000287546 RAB3GAP2Q9H2M9 1393 aa9.71□□□□□ -0.85
VPS8-201ENST00000287546 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
VPS8-201ENST00000287546 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
VPS8-201ENST00000287546 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
VPS8-201ENST00000287546 IQGAP2Q13576 1575 aa9.7□□□□□ -0.86
VPS8-201ENST00000287546 MAGI1Q96QZ7 1491 aaPredicted RBP9.7□□□□□ -0.86
VPS8-201ENST00000287546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS8-201ENST00000287546 GRIN2AQ12879 1464 aa9.69□□□□□ -0.86
VPS8-201ENST00000287546 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS8-201ENST00000287546 DHX57Q6P158 1386 aaKnown RBP9.69□□□□□ -0.86
VPS8-201ENST00000287546 PCF11O94913 1555 aaKnown RBP9.69□□□□□ -0.86
VPS8-201ENST00000287546 WDR97A6NE52 1622 aa9.69□□□□□ -0.86
VPS8-201ENST00000287546 EHBP1L1Q8N3D4 1523 aa9.69□□□□□ -0.86
VPS8-201ENST00000287546 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
VPS8-201ENST00000287546 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
VPS8-201ENST00000287546 PBRM1Q86U86 1689 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 FGD6Q6ZV73 1430 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 KIAA0586Q9BVV6 1533 aa9.68□□□□□ -0.86
VPS8-201ENST00000287546 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
VPS8-201ENST00000287546 PHLDB1Q86UU1 1377 aa9.67□□□□□ -0.86
VPS8-201ENST00000287546 ADAMTS12P58397 1594 aa9.66□□□□□ -0.86
VPS8-201ENST00000287546 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
VPS8-201ENST00000287546 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
VPS8-201ENST00000287546 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.87
VPS8-201ENST00000287546 A0A0G2JS52 829 aa9.64□□□□□ -0.87
VPS8-201ENST00000287546 ANP32CO43423 234 aa9.64□□□□□ -0.87
VPS8-201ENST00000287546 NCOA2Q15596 1464 aa9.64□□□□□ -0.87
VPS8-201ENST00000287546 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
VPS8-201ENST00000287546 NEFLP07196 543 aa9.62□□□□□ -0.87
VPS8-201ENST00000287546 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
VPS8-201ENST00000287546 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
VPS8-201ENST00000287546 MIA2Q96PC5 1412 aa9.61□□□□□ -0.87
VPS8-201ENST00000287546 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
VPS8-201ENST00000287546 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
VPS8-201ENST00000287546 AEBP2Q6ZN18 517 aaPredicted RBP9.6□□□□□ -0.87
VPS8-201ENST00000287546 NEFMP07197 916 aa9.59□□□□□ -0.87
VPS8-201ENST00000287546 STAG3Q9UJ98 1225 aa9.59□□□□□ -0.87
VPS8-201ENST00000287546 EPRSP07814 1512 aaKnown RBP9.58□□□□□ -0.88
VPS8-201ENST00000287546 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
VPS8-201ENST00000287546 PTPRGP23470 1445 aa9.58□□□□□ -0.88
VPS8-201ENST00000287546 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
VPS8-201ENST00000287546 UGGT2Q9NYU1 1516 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 ANKRD30AQ9BXX3 1397 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 SAMD9Q5K651 1589 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms