RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
VAMP7-202ENST00000286448 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
VAMP7-202ENST00000286448 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
VAMP7-202ENST00000286448 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
VAMP7-202ENST00000286448 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
VAMP7-202ENST00000286448 FHOD3Q2V2M9 1422 aa18.9■□□□□ 0.62
VAMP7-202ENST00000286448 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
VAMP7-202ENST00000286448 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
VAMP7-202ENST00000286448 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
VAMP7-202ENST00000286448 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
VAMP7-202ENST00000286448 TIAM1Q13009 1591 aa18.87■□□□□ 0.61
VAMP7-202ENST00000286448 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
VAMP7-202ENST00000286448 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
VAMP7-202ENST00000286448 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
VAMP7-202ENST00000286448 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
VAMP7-202ENST00000286448 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
VAMP7-202ENST00000286448 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
VAMP7-202ENST00000286448 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.6
VAMP7-202ENST00000286448 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
VAMP7-202ENST00000286448 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
VAMP7-202ENST00000286448 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
VAMP7-202ENST00000286448 BCANQ96GW7 911 aa18.7■□□□□ 0.58
VAMP7-202ENST00000286448 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
VAMP7-202ENST00000286448 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
VAMP7-202ENST00000286448 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
VAMP7-202ENST00000286448 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
VAMP7-202ENST00000286448 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
VAMP7-202ENST00000286448 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
VAMP7-202ENST00000286448 FKBP8Q14318 412 aa18.66■□□□□ 0.58
VAMP7-202ENST00000286448 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
VAMP7-202ENST00000286448 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
VAMP7-202ENST00000286448 CUL7Q14999 1698 aa18.65■□□□□ 0.58
VAMP7-202ENST00000286448 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
VAMP7-202ENST00000286448 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
VAMP7-202ENST00000286448 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
VAMP7-202ENST00000286448 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
VAMP7-202ENST00000286448 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
VAMP7-202ENST00000286448 RBM19Q9Y4C8 960 aaKnown RBP18.6■□□□□ 0.57
VAMP7-202ENST00000286448 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
VAMP7-202ENST00000286448 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
VAMP7-202ENST00000286448 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.572e-6■■■■■ 26.9
VAMP7-202ENST00000286448 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.56
VAMP7-202ENST00000286448 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
VAMP7-202ENST00000286448 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
VAMP7-202ENST00000286448 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
VAMP7-202ENST00000286448 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
VAMP7-202ENST00000286448 NEFLP07196 543 aa18.55■□□□□ 0.56
VAMP7-202ENST00000286448 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
VAMP7-202ENST00000286448 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
VAMP7-202ENST00000286448 MAGI3Q5TCQ9 1506 aa18.51■□□□□ 0.55
VAMP7-202ENST00000286448 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
VAMP7-202ENST00000286448 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
VAMP7-202ENST00000286448 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
VAMP7-202ENST00000286448 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
VAMP7-202ENST00000286448 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
VAMP7-202ENST00000286448 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
VAMP7-202ENST00000286448 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
VAMP7-202ENST00000286448 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
VAMP7-202ENST00000286448 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
VAMP7-202ENST00000286448 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
VAMP7-202ENST00000286448 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
VAMP7-202ENST00000286448 MSH5O43196 834 aa18.41■□□□□ 0.54
VAMP7-202ENST00000286448 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
VAMP7-202ENST00000286448 RRP7BPQ9NSQ0 103 aa18.39■□□□□ 0.53
VAMP7-202ENST00000286448 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
VAMP7-202ENST00000286448 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
VAMP7-202ENST00000286448 MYOM3Q5VTT5 1437 aa18.36■□□□□ 0.53
VAMP7-202ENST00000286448 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
VAMP7-202ENST00000286448 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
VAMP7-202ENST00000286448 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
VAMP7-202ENST00000286448 ANP32CO43423 234 aa18.34■□□□□ 0.53
VAMP7-202ENST00000286448 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
VAMP7-202ENST00000286448 NAIPQ13075 1403 aa18.33■□□□□ 0.53
VAMP7-202ENST00000286448 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.53
VAMP7-202ENST00000286448 KDM6BO15054 1643 aa18.33■□□□□ 0.52
VAMP7-202ENST00000286448 UGGT2Q9NYU1 1516 aa18.31■□□□□ 0.52
VAMP7-202ENST00000286448 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
VAMP7-202ENST00000286448 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
VAMP7-202ENST00000286448 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
VAMP7-202ENST00000286448 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
VAMP7-202ENST00000286448 EPRSP07814 1512 aaKnown RBP18.3■□□□□ 0.52
VAMP7-202ENST00000286448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
VAMP7-202ENST00000286448 FOXD1Q16676 465 aa18.29■□□□□ 0.52
VAMP7-202ENST00000286448 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.52
VAMP7-202ENST00000286448 ARHGEF11O15085 1522 aa18.27■□□□□ 0.52
VAMP7-202ENST00000286448 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
VAMP7-202ENST00000286448 WDR62O43379 1518 aa18.25■□□□□ 0.51
VAMP7-202ENST00000286448 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
VAMP7-202ENST00000286448 CDK11AQ9UQ88 783 aaPredicted RBP18.24■□□□□ 0.51
VAMP7-202ENST00000286448 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
VAMP7-202ENST00000286448 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
VAMP7-202ENST00000286448 FBLN2P98095 1184 aa18.23■□□□□ 0.51
VAMP7-202ENST00000286448 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
VAMP7-202ENST00000286448 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
VAMP7-202ENST00000286448 TONSLQ96HA7 1378 aa18.22■□□□□ 0.51
VAMP7-202ENST00000286448 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
VAMP7-202ENST00000286448 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
VAMP7-202ENST00000286448 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
VAMP7-202ENST00000286448 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
VAMP7-202ENST00000286448 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms