RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
TRIM42-201ENST00000286349 FHAD1B1AJZ9 1412 aa11.68□□□□□ -0.54
TRIM42-201ENST00000286349 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
TRIM42-201ENST00000286349 FBLN2P98095 1184 aa11.67□□□□□ -0.54
TRIM42-201ENST00000286349 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
TRIM42-201ENST00000286349 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
TRIM42-201ENST00000286349 SYNJ2O15056 1496 aa11.65□□□□□ -0.54
TRIM42-201ENST00000286349 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
TRIM42-201ENST00000286349 RAPGEF2Q9Y4G8 1499 aa11.63□□□□□ -0.55
TRIM42-201ENST00000286349 CUL7Q14999 1698 aa11.62□□□□□ -0.55
TRIM42-201ENST00000286349 GRIN2AQ12879 1464 aa11.61□□□□□ -0.55
TRIM42-201ENST00000286349 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
TRIM42-201ENST00000286349 CHD1O14646 1710 aa11.58□□□□□ -0.56
TRIM42-201ENST00000286349 NUP160Q12769 1436 aa11.58□□□□□ -0.56
TRIM42-201ENST00000286349 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
TRIM42-201ENST00000286349 EIF5BO60841 1220 aaKnown RBP11.55□□□□□ -0.56
TRIM42-201ENST00000286349 CLIP1P30622 1438 aa11.55□□□□□ -0.56
TRIM42-201ENST00000286349 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
TRIM42-201ENST00000286349 KIAA0586Q9BVV6 1533 aa11.51□□□□□ -0.57
TRIM42-201ENST00000286349 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
TRIM42-201ENST00000286349 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
TRIM42-201ENST00000286349 JPH4Q96JJ6 628 aa11.5□□□□□ -0.57
TRIM42-201ENST00000286349 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
TRIM42-201ENST00000286349 IQGAP2Q13576 1575 aa11.44□□□□□ -0.58
TRIM42-201ENST00000286349 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
TRIM42-201ENST00000286349 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
TRIM42-201ENST00000286349 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
TRIM42-201ENST00000286349 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
TRIM42-201ENST00000286349 UGGT2Q9NYU1 1516 aa11.42□□□□□ -0.58
TRIM42-201ENST00000286349 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
TRIM42-201ENST00000286349 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
TRIM42-201ENST00000286349 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
TRIM42-201ENST00000286349 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
TRIM42-201ENST00000286349 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
TRIM42-201ENST00000286349 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
TRIM42-201ENST00000286349 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
TRIM42-201ENST00000286349 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
TRIM42-201ENST00000286349 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
TRIM42-201ENST00000286349 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
TRIM42-201ENST00000286349 FHOD3Q2V2M9 1422 aa11.34□□□□□ -0.59
TRIM42-201ENST00000286349 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
TRIM42-201ENST00000286349 KIAA0556O60303 1618 aa11.34□□□□□ -0.59
TRIM42-201ENST00000286349 RIMBP3CA6NJZ7 1639 aa11.32□□□□□ -0.6
TRIM42-201ENST00000286349 RIMBP3BA6NNM3 1639 aa11.32□□□□□ -0.6
TRIM42-201ENST00000286349 RIMBP3Q9UFD9 1639 aa11.32□□□□□ -0.6
TRIM42-201ENST00000286349 PTPRGP23470 1445 aa11.32□□□□□ -0.6
TRIM42-201ENST00000286349 EFCAB5A4FU69 1503 aa11.31□□□□□ -0.6
TRIM42-201ENST00000286349 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
TRIM42-201ENST00000286349 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
TRIM42-201ENST00000286349 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
TRIM42-201ENST00000286349 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
TRIM42-201ENST00000286349 PLB1Q6P1J6 1458 aa11.27□□□□□ -0.61
TRIM42-201ENST00000286349 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
TRIM42-201ENST00000286349 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
TRIM42-201ENST00000286349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
TRIM42-201ENST00000286349 ABCA8O94911 1581 aa11.22□□□□□ -0.61
TRIM42-201ENST00000286349 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
TRIM42-201ENST00000286349 TIAM1Q13009 1591 aa11.21□□□□□ -0.62
TRIM42-201ENST00000286349 RRBP1Q9P2E9 1410 aaKnown RBP11.2□□□□□ -0.62
TRIM42-201ENST00000286349 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
TRIM42-201ENST00000286349 CASKIN1Q8WXD9 1431 aa11.2□□□□□ -0.62
TRIM42-201ENST00000286349 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
TRIM42-201ENST00000286349 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
TRIM42-201ENST00000286349 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
TRIM42-201ENST00000286349 FYCO1Q9BQS8 1478 aa11.19□□□□□ -0.62
TRIM42-201ENST00000286349 ABCC2Q92887 1545 aa11.18□□□□□ -0.62
TRIM42-201ENST00000286349 ATP10BO94823 1461 aa11.18□□□□□ -0.62
TRIM42-201ENST00000286349 KANK4Q5T7N3 995 aaPredicted RBP11.18□□□□□ -0.62
TRIM42-201ENST00000286349 ARXQ96QS3 562 aa11.17□□□□□ -0.62
TRIM42-201ENST00000286349 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
TRIM42-201ENST00000286349 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
TRIM42-201ENST00000286349 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
TRIM42-201ENST00000286349 KDM5BQ9UGL1 1544 aa11.16□□□□□ -0.62
TRIM42-201ENST00000286349 LRRC9Q6ZRR7 1453 aa11.16□□□□□ -0.62
TRIM42-201ENST00000286349 CDK13Q14004 1512 aaKnown RBP11.15□□□□□ -0.63
TRIM42-201ENST00000286349 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
TRIM42-201ENST00000286349 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
TRIM42-201ENST00000286349 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
TRIM42-201ENST00000286349 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
TRIM42-201ENST00000286349 UBE2Q2Q8WVN8 375 aa11.13□□□□□ -0.63
TRIM42-201ENST00000286349 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
TRIM42-201ENST00000286349 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
TRIM42-201ENST00000286349 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM42-201ENST00000286349 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
TRIM42-201ENST00000286349 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
TRIM42-201ENST00000286349 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
TRIM42-201ENST00000286349 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
TRIM42-201ENST00000286349 PLEKHD1A6NEE1 506 aa11.08□□□□□ -0.64
TRIM42-201ENST00000286349 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
TRIM42-201ENST00000286349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIM42-201ENST00000286349 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
TRIM42-201ENST00000286349 MAPKBP1O60336 1514 aa11.05□□□□□ -0.64
TRIM42-201ENST00000286349 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
TRIM42-201ENST00000286349 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
TRIM42-201ENST00000286349 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
TRIM42-201ENST00000286349 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
TRIM42-201ENST00000286349 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.64
TRIM42-201ENST00000286349 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.64
TRIM42-201ENST00000286349 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
TRIM42-201ENST00000286349 ANP32EQ9BTT0 268 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms