RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
CCDC144B-201ENST00000285176 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
CCDC144B-201ENST00000285176 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
CCDC144B-201ENST00000285176 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
CCDC144B-201ENST00000285176 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
CCDC144B-201ENST00000285176 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
CCDC144B-201ENST00000285176 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
CCDC144B-201ENST00000285176 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
CCDC144B-201ENST00000285176 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
CCDC144B-201ENST00000285176 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
CCDC144B-201ENST00000285176 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
CCDC144B-201ENST00000285176 PLEKHD1A6NEE1 506 aa13.2□□□□□ -0.3
CCDC144B-201ENST00000285176 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC144B-201ENST00000285176 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CCDC144B-201ENST00000285176 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 KIF21BO75037 1637 aa13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
CCDC144B-201ENST00000285176 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
CCDC144B-201ENST00000285176 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
CCDC144B-201ENST00000285176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC144B-201ENST00000285176 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.31
CCDC144B-201ENST00000285176 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-201ENST00000285176 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
CCDC144B-201ENST00000285176 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
CCDC144B-201ENST00000285176 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
CCDC144B-201ENST00000285176 HIRIP3Q9BW71 556 aaPredicted RBP13.1□□□□□ -0.31
CCDC144B-201ENST00000285176 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
CCDC144B-201ENST00000285176 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
CCDC144B-201ENST00000285176 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.32
CCDC144B-201ENST00000285176 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
CCDC144B-201ENST00000285176 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
CCDC144B-201ENST00000285176 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
CCDC144B-201ENST00000285176 FMN1Q68DA7 1419 aa13.06□□□□□ -0.32
CCDC144B-201ENST00000285176 FOXD1Q16676 465 aa13.06□□□□□ -0.32
CCDC144B-201ENST00000285176 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
CCDC144B-201ENST00000285176 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
CCDC144B-201ENST00000285176 PTPRGP23470 1445 aa13.04□□□□□ -0.32
CCDC144B-201ENST00000285176 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
CCDC144B-201ENST00000285176 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
CCDC144B-201ENST00000285176 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
CCDC144B-201ENST00000285176 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
CCDC144B-201ENST00000285176 HNRNPMP52272 730 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC144B-201ENST00000285176 PHLDB1Q86UU1 1377 aa13.01□□□□□ -0.33
CCDC144B-201ENST00000285176 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
CCDC144B-201ENST00000285176 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.33
CCDC144B-201ENST00000285176 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
CCDC144B-201ENST00000285176 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
CCDC144B-201ENST00000285176 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
CCDC144B-201ENST00000285176 CDK13Q14004 1512 aaKnown RBP12.95□□□□□ -0.34
CCDC144B-201ENST00000285176 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-201ENST00000285176 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-201ENST00000285176 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
CCDC144B-201ENST00000285176 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
CCDC144B-201ENST00000285176 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
CCDC144B-201ENST00000285176 WDR62O43379 1518 aa12.92□□□□□ -0.34
CCDC144B-201ENST00000285176 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
CCDC144B-201ENST00000285176 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
CCDC144B-201ENST00000285176 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
CCDC144B-201ENST00000285176 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.34
CCDC144B-201ENST00000285176 MLECQ14165 292 aa12.9□□□□□ -0.34
CCDC144B-201ENST00000285176 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
CCDC144B-201ENST00000285176 PCF11O94913 1555 aaKnown RBP12.89□□□□□ -0.35
CCDC144B-201ENST00000285176 CUL7Q14999 1698 aa12.88□□□□□ -0.35
CCDC144B-201ENST00000285176 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
CCDC144B-201ENST00000285176 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-201ENST00000285176 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
CCDC144B-201ENST00000285176 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
CCDC144B-201ENST00000285176 GGT6Q6P531 493 aa12.84□□□□□ -0.35
CCDC144B-201ENST00000285176 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
CCDC144B-201ENST00000285176 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-201ENST00000285176 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
CCDC144B-201ENST00000285176 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
CCDC144B-201ENST00000285176 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
CCDC144B-201ENST00000285176 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
CCDC144B-201ENST00000285176 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
CCDC144B-201ENST00000285176 PBRM1Q86U86 1689 aa12.81□□□□□ -0.36
CCDC144B-201ENST00000285176 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 EPRSP07814 1512 aaKnown RBP12.8□□□□□ -0.36
CCDC144B-201ENST00000285176 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-201ENST00000285176 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
CCDC144B-201ENST00000285176 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
CCDC144B-201ENST00000285176 PKD2Q13563 968 aa12.78□□□□□ -0.36
CCDC144B-201ENST00000285176 BCANQ96GW7 911 aa12.78□□□□□ -0.36
CCDC144B-201ENST00000285176 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
CCDC144B-201ENST00000285176 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
CCDC144B-201ENST00000285176 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
CCDC144B-201ENST00000285176 KIF3BO15066 747 aa12.75□□□□□ -0.37
CCDC144B-201ENST00000285176 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
CCDC144B-201ENST00000285176 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
CCDC144B-201ENST00000285176 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
CCDC144B-201ENST00000285176 NUP155O75694 1391 aa12.74□□□□□ -0.37
CCDC144B-201ENST00000285176 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
CCDC144B-201ENST00000285176 CTTNBP2Q8WZ74 1663 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms