RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 ZEB1P37275 1124 aaPredicted RBP5.4□□□□□ -1.55
RAB3C-201ENST00000282878 NESP48681 1621 aa5.4□□□□□ -1.55
RAB3C-201ENST00000282878 FBXO3Q9UK99 471 aa5.39□□□□□ -1.55
RAB3C-201ENST00000282878 TOP2AP11388 1531 aaKnown RBP5.39□□□□□ -1.55
RAB3C-201ENST00000282878 NCAPD3P42695 1498 aa5.39□□□□□ -1.55
RAB3C-201ENST00000282878 MYT1LQ9UL68 1186 aa5.39□□□□□ -1.55
RAB3C-201ENST00000282878 RAD54L2Q9Y4B4 1467 aa5.39□□□□□ -1.55
RAB3C-201ENST00000282878 PEG3Q9GZU2 1588 aa5.38□□□□□ -1.55
RAB3C-201ENST00000282878 KAT6BQ8WYB5 2073 aa5.38□□□□□ -1.55
RAB3C-201ENST00000282878 KCNH8Q96L42 1107 aa5.38□□□□□ -1.55
RAB3C-201ENST00000282878 SENP3Q9H4L4 574 aaPredicted RBP5.37□□□□□ -1.55
RAB3C-201ENST00000282878 ZNF777Q9ULD5 760 aaPredicted RBP5.37□□□□□ -1.55
RAB3C-201ENST00000282878 CUX2O14529 1486 aa5.37□□□□□ -1.55
RAB3C-201ENST00000282878 FOXD1Q16676 465 aa5.37□□□□□ -1.55
RAB3C-201ENST00000282878 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.37□□□□□ -1.55
RAB3C-201ENST00000282878 RRP7BPQ9NSQ0 103 aa5.37□□□□□ -1.55
RAB3C-201ENST00000282878 GOLGA3Q08378 1498 aa5.37□□□□□ -1.55
RAB3C-201ENST00000282878 SMARCA4P51532 1647 aa5.36□□□□□ -1.55
RAB3C-201ENST00000282878 ZNF316A6NFI3 1004 aaPredicted RBP5.36□□□□□ -1.55
RAB3C-201ENST00000282878 NEFLP07196 543 aa5.36□□□□□ -1.55
RAB3C-201ENST00000282878 FKBP8Q14318 412 aa5.36□□□□□ -1.55
RAB3C-201ENST00000282878 TRIM52Q96A61 297 aa5.35□□□□□ -1.55
RAB3C-201ENST00000282878 UNC13AQ9UPW8 1703 aa5.35□□□□□ -1.55
RAB3C-201ENST00000282878 IGF1RP08069 1367 aa5.35□□□□□ -1.55
RAB3C-201ENST00000282878 CARMIL1Q5VZK9 1371 aa5.34□□□□□ -1.55
RAB3C-201ENST00000282878 FHOD3Q2V2M9 1422 aa5.34□□□□□ -1.56
RAB3C-201ENST00000282878 SYNJ1O43426 1573 aa5.33□□□□□ -1.56
RAB3C-201ENST00000282878 CADPSQ9ULU8 1353 aa5.33□□□□□ -1.56
RAB3C-201ENST00000282878 ZNF326Q5BKZ1 582 aaKnown RBP5.33□□□□□ -1.56
RAB3C-201ENST00000282878 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
RAB3C-201ENST00000282878 EIF4G1Q04637 1599 aaKnown RBP5.32□□□□□ -1.56
RAB3C-201ENST00000282878 ZBTB7CA1YPR0 619 aa5.31□□□□□ -1.56
RAB3C-201ENST00000282878 CEP164Q9UPV0 1460 aa5.31□□□□□ -1.56
RAB3C-201ENST00000282878 ACIN1Q9UKV3 1341 aaKnown RBP5.3□□□□□ -1.56
RAB3C-201ENST00000282878 ARAP1Q96P48 1450 aa5.3□□□□□ -1.56
RAB3C-201ENST00000282878 VSIG10Q8N0Z9 540 aa5.3□□□□□ -1.56
RAB3C-201ENST00000282878 ZNF644Q9H582 1327 aaPredicted RBP5.29□□□□□ -1.56
RAB3C-201ENST00000282878 AQRO60306 1485 aaKnown RBP eCLIP5.29□□□□□ -1.56
RAB3C-201ENST00000282878 KIF27Q86VH2 1401 aa5.29□□□□□ -1.56
RAB3C-201ENST00000282878 VPS8Q8N3P4 1428 aa5.29□□□□□ -1.56
RAB3C-201ENST00000282878 PDS5BQ9NTI5 1447 aa5.28□□□□□ -1.56
RAB3C-201ENST00000282878 PHLDB1Q86UU1 1377 aa5.28□□□□□ -1.56
RAB3C-201ENST00000282878 CUX1P39880 1505 aa5.28□□□□□ -1.56
RAB3C-201ENST00000282878 CFAP44Q96MT7 982 aa5.28□□□□□ -1.56
RAB3C-201ENST00000282878 ARID3AQ99856 593 aa5.28□□□□□ -1.56
RAB3C-201ENST00000282878 CCDC9Q9Y3X0 531 aaKnown RBP5.28□□□□□ -1.56
RAB3C-201ENST00000282878 DHX57Q6P158 1386 aaKnown RBP5.27□□□□□ -1.57
RAB3C-201ENST00000282878 IRX6P78412 446 aaPredicted RBP5.27□□□□□ -1.57
RAB3C-201ENST00000282878 KIF21BO75037 1637 aa5.27□□□□□ -1.57
RAB3C-201ENST00000282878 FGD5Q6ZNL6 1462 aa5.26□□□□□ -1.57
RAB3C-201ENST00000282878 HMGXB3Q12766 1538 aa5.26□□□□□ -1.57
RAB3C-201ENST00000282878 FANCD2Q9BXW9 1451 aa5.26□□□□□ -1.57
RAB3C-201ENST00000282878 CHMP7Q8WUX9 453 aaPredicted RBP5.25□□□□□ -1.57
RAB3C-201ENST00000282878 KLHL34Q8N239 644 aa5.24□□□□□ -1.57
RAB3C-201ENST00000282878 RAB3GAP2Q9H2M9 1393 aa5.24□□□□□ -1.57
RAB3C-201ENST00000282878 EEA1Q15075 1411 aa5.24□□□□□ -1.57
RAB3C-201ENST00000282878 TMEM132AQ24JP5 1023 aa5.24□□□□□ -1.57
RAB3C-201ENST00000282878 GLIPR1L2Q4G1C9 344 aa5.23□□□□□ -1.57
RAB3C-201ENST00000282878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.23□□□□□ -1.57
RAB3C-201ENST00000282878 KDM2AQ9Y2K7 1162 aa5.23□□□□□ -1.57
RAB3C-201ENST00000282878 CFTRP13569 1480 aa5.23□□□□□ -1.57
RAB3C-201ENST00000282878 PRXQ9BXM0 1461 aa5.23□□□□□ -1.57
RAB3C-201ENST00000282878 ARHGAP35Q9NRY4 1499 aa5.23□□□□□ -1.57
RAB3C-201ENST00000282878 MTUS2Q5JR59 1369 aa5.22□□□□□ -1.57
RAB3C-201ENST00000282878 CCNB3Q8WWL7 1395 aa5.22□□□□□ -1.57
RAB3C-201ENST00000282878 CENPBP07199 599 aaPredicted RBP5.22□□□□□ -1.57
RAB3C-201ENST00000282878 SALL2Q9Y467 1007 aaPredicted RBP5.21□□□□□ -1.58
RAB3C-201ENST00000282878 ARID4BQ4LE39 1312 aaPredicted RBP5.2□□□□□ -1.58
RAB3C-201ENST00000282878 PAXIP1Q6ZW49 1069 aaPredicted RBP5.2□□□□□ -1.58
RAB3C-201ENST00000282878 RGL3Q3MIN7 710 aa5.2□□□□□ -1.58
RAB3C-201ENST00000282878 CCDC184Q52MB2 194 aa5.19□□□□□ -1.58
RAB3C-201ENST00000282878 HNRNPMP52272 730 aaKnown RBP eCLIP5.19□□□□□ -1.58
RAB3C-201ENST00000282878 PTPRKQ15262 1439 aa5.19□□□□□ -1.58
RAB3C-201ENST00000282878 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
RAB3C-201ENST00000282878 CC2D2AQ9P2K1 1620 aa5.18□□□□□ -1.58
RAB3C-201ENST00000282878 ZNF608Q9ULD9 1512 aaPredicted RBP5.18□□□□□ -1.58
RAB3C-201ENST00000282878 POLA1P09884 1462 aaPredicted RBP5.18□□□□□ -1.58
RAB3C-201ENST00000282878 HSPA5P11021 654 aaKnown RBP5.17□□□□□ -1.58
RAB3C-201ENST00000282878 FAM9BQ8IZU0 186 aa5.17□□□□□ -1.58
RAB3C-201ENST00000282878 URB2Q14146 1524 aaKnown RBP5.16□□□□□ -1.58
RAB3C-201ENST00000282878 PPP1R15AO75807 674 aaPredicted RBP5.16□□□□□ -1.58
RAB3C-201ENST00000282878 L3MBTL2Q969R5 705 aa5.16□□□□□ -1.58
RAB3C-201ENST00000282878 C11orf95C9JLR9 678 aaPredicted RBP5.15□□□□□ -1.58
RAB3C-201ENST00000282878 PDIA4P13667 645 aaKnown RBP5.15□□□□□ -1.58
RAB3C-201ENST00000282878 NBPF8Q3BBV2 869 aa5.15□□□□□ -1.58
RAB3C-201ENST00000282878 JPH4Q96JJ6 628 aa5.15□□□□□ -1.58
RAB3C-201ENST00000282878 CFDP1Q9UEE9 299 aaPredicted RBP5.15□□□□□ -1.58
RAB3C-201ENST00000282878 NUTM2DQ5VT03 806 aaPredicted RBP5.15□□□□□ -1.59
RAB3C-201ENST00000282878 TOPBP1Q92547 1522 aa5.14□□□□□ -1.59
RAB3C-201ENST00000282878 SETD5Q9C0A6 1442 aa5.14□□□□□ -1.59
RAB3C-201ENST00000282878 TONSLQ96HA7 1378 aa5.14□□□□□ -1.59
RAB3C-201ENST00000282878 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
RAB3C-201ENST00000282878 BCL11AQ9H165 835 aa5.13□□□□□ -1.59
RAB3C-201ENST00000282878 PRG4Q92954 1404 aaPredicted RBP5.13□□□□□ -1.59
RAB3C-201ENST00000282878 ERCC6Q03468 1493 aa5.13□□□□□ -1.59
RAB3C-201ENST00000282878 PKD2Q13563 968 aa5.13□□□□□ -1.59
RAB3C-201ENST00000282878 CHGAP10645 457 aaKnown RBP5.12□□□□□ -1.59
RAB3C-201ENST00000282878 HNRNPUQ00839 825 aaKnown RBP eCLIP5.12□□□□□ -1.59
RAB3C-201ENST00000282878 GAPVD1Q14C86 1478 aa5.11□□□□□ -1.59
RAB3C-201ENST00000282878 PLEKHD1A6NEE1 506 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms