RNA–Protein interactions for RNA: ENST00000278559.7

CAPN5-201, Transcript of calpain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN5, Length 4,397 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-201ENST00000278559 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
CAPN5-201ENST00000278559 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
CAPN5-201ENST00000278559 BCANQ96GW7 911 aa18.62■□□□□ 0.57
CAPN5-201ENST00000278559 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
CAPN5-201ENST00000278559 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
CAPN5-201ENST00000278559 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
CAPN5-201ENST00000278559 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
CAPN5-201ENST00000278559 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
CAPN5-201ENST00000278559 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
CAPN5-201ENST00000278559 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
CAPN5-201ENST00000278559 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
CAPN5-201ENST00000278559 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
CAPN5-201ENST00000278559 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
CAPN5-201ENST00000278559 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
CAPN5-201ENST00000278559 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
CAPN5-201ENST00000278559 MIER1Q8N108 512 aa18.49■□□□□ 0.55
CAPN5-201ENST00000278559 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
CAPN5-201ENST00000278559 NEFMP07197 916 aa18.48■□□□□ 0.55
CAPN5-201ENST00000278559 MYT1Q01538 1121 aa18.47■□□□□ 0.55
CAPN5-201ENST00000278559 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
CAPN5-201ENST00000278559 ARHGAP35Q9NRY4 1499 aa18.45■□□□□ 0.54
CAPN5-201ENST00000278559 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
CAPN5-201ENST00000278559 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
CAPN5-201ENST00000278559 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
CAPN5-201ENST00000278559 RGL3Q3MIN7 710 aa18.39■□□□□ 0.53
CAPN5-201ENST00000278559 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
CAPN5-201ENST00000278559 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
CAPN5-201ENST00000278559 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
CAPN5-201ENST00000278559 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
CAPN5-201ENST00000278559 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
CAPN5-201ENST00000278559 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
CAPN5-201ENST00000278559 FKBP8Q14318 412 aa18.32■□□□□ 0.52
CAPN5-201ENST00000278559 IGF1RP08069 1367 aa18.32■□□□□ 0.52
CAPN5-201ENST00000278559 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
CAPN5-201ENST00000278559 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
CAPN5-201ENST00000278559 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
CAPN5-201ENST00000278559 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
CAPN5-201ENST00000278559 RAB3GAP2Q9H2M9 1393 aa18.27■□□□□ 0.51
CAPN5-201ENST00000278559 CFTRP13569 1480 aa18.26■□□□□ 0.51
CAPN5-201ENST00000278559 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
CAPN5-201ENST00000278559 WDR43Q15061 677 aaKnown RBP eCLIP18.24■□□□□ 0.51
CAPN5-201ENST00000278559 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
CAPN5-201ENST00000278559 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
CAPN5-201ENST00000278559 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
CAPN5-201ENST00000278559 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
CAPN5-201ENST00000278559 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
CAPN5-201ENST00000278559 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
CAPN5-201ENST00000278559 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
CAPN5-201ENST00000278559 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
CAPN5-201ENST00000278559 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
CAPN5-201ENST00000278559 PKD2Q13563 968 aa18.16■□□□□ 0.5
CAPN5-201ENST00000278559 ANKRD30AQ9BXX3 1397 aa18.15■□□□□ 0.5
CAPN5-201ENST00000278559 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
CAPN5-201ENST00000278559 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
CAPN5-201ENST00000278559 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
CAPN5-201ENST00000278559 KANK1Q14678 1352 aa18.14■□□□□ 0.49
CAPN5-201ENST00000278559 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
CAPN5-201ENST00000278559 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
CAPN5-201ENST00000278559 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
CAPN5-201ENST00000278559 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
CAPN5-201ENST00000278559 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
CAPN5-201ENST00000278559 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
CAPN5-201ENST00000278559 FOXD1Q16676 465 aa18.09■□□□□ 0.49
CAPN5-201ENST00000278559 NUP155O75694 1391 aa18.09■□□□□ 0.49
CAPN5-201ENST00000278559 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
CAPN5-201ENST00000278559 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
CAPN5-201ENST00000278559 KIF21BO75037 1637 aa18.07■□□□□ 0.48
CAPN5-201ENST00000278559 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
CAPN5-201ENST00000278559 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
CAPN5-201ENST00000278559 PTPRGP23470 1445 aa18.05■□□□□ 0.48
CAPN5-201ENST00000278559 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
CAPN5-201ENST00000278559 BCL11AQ9H165 835 aa18.05■□□□□ 0.48
CAPN5-201ENST00000278559 NESP48681 1621 aa18.04■□□□□ 0.48
CAPN5-201ENST00000278559 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
CAPN5-201ENST00000278559 TOP2BQ02880 1626 aa18.03■□□□□ 0.48
CAPN5-201ENST00000278559 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN5-201ENST00000278559 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
CAPN5-201ENST00000278559 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.48
CAPN5-201ENST00000278559 TMF1P82094 1093 aa18.01■□□□□ 0.47
CAPN5-201ENST00000278559 GGT6Q6P531 493 aa18.01■□□□□ 0.47
CAPN5-201ENST00000278559 PRXQ9BXM0 1461 aa18■□□□□ 0.47
CAPN5-201ENST00000278559 CUX1P39880 1505 aa18■□□□□ 0.47
CAPN5-201ENST00000278559 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
CAPN5-201ENST00000278559 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
CAPN5-201ENST00000278559 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
CAPN5-201ENST00000278559 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
CAPN5-201ENST00000278559 POGKQ9P215 609 aa17.97■□□□□ 0.47
CAPN5-201ENST00000278559 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
CAPN5-201ENST00000278559 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.47
CAPN5-201ENST00000278559 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
CAPN5-201ENST00000278559 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
CAPN5-201ENST00000278559 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
CAPN5-201ENST00000278559 KIF3BO15066 747 aa17.93■□□□□ 0.46
CAPN5-201ENST00000278559 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
CAPN5-201ENST00000278559 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
CAPN5-201ENST00000278559 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
CAPN5-201ENST00000278559 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
CAPN5-201ENST00000278559 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
CAPN5-201ENST00000278559 MLECQ14165 292 aa17.9■□□□□ 0.46
CAPN5-201ENST00000278559 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms