RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 KIAA0586Q9BVV6 1533 aa28.04■■■□□ 2.08
SKP2-201ENST00000274254 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
SKP2-201ENST00000274254 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
SKP2-201ENST00000274254 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
SKP2-201ENST00000274254 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
SKP2-201ENST00000274254 IQGAP2Q13576 1575 aa27.97■■■□□ 2.07
SKP2-201ENST00000274254 SHROOM2Q13796 1616 aa27.88■■■□□ 2.05
SKP2-201ENST00000274254 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
SKP2-201ENST00000274254 UGGT2Q9NYU1 1516 aa27.86■■■□□ 2.05
SKP2-201ENST00000274254 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
SKP2-201ENST00000274254 DISP1Q96F81 1524 aa27.74■■■□□ 2.03
SKP2-201ENST00000274254 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
SKP2-201ENST00000274254 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
SKP2-201ENST00000274254 RANGAP1P46060 587 aaPredicted RBP27.72■■■□□ 2.03
SKP2-201ENST00000274254 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
SKP2-201ENST00000274254 CLIP1P30622 1438 aa27.7■■■□□ 2.02
SKP2-201ENST00000274254 KIAA0556O60303 1618 aa27.7■■■□□ 2.02
SKP2-201ENST00000274254 CARMIL2Q6F5E8 1435 aa27.69■■■□□ 2.02
SKP2-201ENST00000274254 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
SKP2-201ENST00000274254 ARHGAP35Q9NRY4 1499 aa27.69■■■□□ 2.02
SKP2-201ENST00000274254 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
SKP2-201ENST00000274254 P3H3Q8IVL6 736 aa27.6■■■□□ 2.01
SKP2-201ENST00000274254 FHOD3Q2V2M9 1422 aa27.57■■■□□ 2
SKP2-201ENST00000274254 ARAP1Q96P48 1450 aa27.56■■■□□ 2
SKP2-201ENST00000274254 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
SKP2-201ENST00000274254 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
SKP2-201ENST00000274254 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
SKP2-201ENST00000274254 DNAJC5Q9H3Z4 198 aa27.55■■■□□ 2
SKP2-201ENST00000274254 PTPRGP23470 1445 aa27.5■■□□□ 1.99
SKP2-201ENST00000274254 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
SKP2-201ENST00000274254 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
SKP2-201ENST00000274254 PLB1Q6P1J6 1458 aa27.37■■□□□ 1.97
SKP2-201ENST00000274254 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
SKP2-201ENST00000274254 ABCA8O94911 1581 aa27.36■■□□□ 1.97
SKP2-201ENST00000274254 UACAQ9BZF9 1416 aa27.35■■□□□ 1.97
SKP2-201ENST00000274254 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
SKP2-201ENST00000274254 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
SKP2-201ENST00000274254 CASKIN1Q8WXD9 1431 aa27.3■■□□□ 1.96
SKP2-201ENST00000274254 UHRF1BP1LA0JNW5 1464 aa27.3■■□□□ 1.96
SKP2-201ENST00000274254 PCF11O94913 1555 aaKnown RBP27.3■■□□□ 1.96
SKP2-201ENST00000274254 ABCC2Q92887 1545 aa27.3■■□□□ 1.96
SKP2-201ENST00000274254 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
SKP2-201ENST00000274254 ADCY10Q96PN6 1610 aa27.26■■□□□ 1.95
SKP2-201ENST00000274254 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
SKP2-201ENST00000274254 HECW1Q76N89 1606 aa27.23■■□□□ 1.95
SKP2-201ENST00000274254 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
SKP2-201ENST00000274254 ATP1B4Q9UN42 357 aaPredicted RBP27.16■■□□□ 1.94
SKP2-201ENST00000274254 EPRSP07814 1512 aaKnown RBP27.16■■□□□ 1.94
SKP2-201ENST00000274254 LRRIQ1Q96JM4 1722 aa27.15■■□□□ 1.94
SKP2-201ENST00000274254 ATP10BO94823 1461 aa27.14■■□□□ 1.94
SKP2-201ENST00000274254 CCDC18Q5T9S5 1454 aa27.12■■□□□ 1.93
SKP2-201ENST00000274254 ARID3CA6NKF2 412 aa27.11■■□□□ 1.93
SKP2-201ENST00000274254 CDK13Q14004 1512 aaKnown RBP27.1■■□□□ 1.93
SKP2-201ENST00000274254 ZCCHC11Q5TAX3 1644 aaKnown RBP27.1■■□□□ 1.93
SKP2-201ENST00000274254 MAP3K1Q13233 1512 aa27.07■■□□□ 1.92
SKP2-201ENST00000274254 NPM1P06748 294 aaKnown RBP eCLIP27.05■■□□□ 1.92
SKP2-201ENST00000274254 TIAM1Q13009 1591 aa27.03■■□□□ 1.92
SKP2-201ENST00000274254 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
SKP2-201ENST00000274254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
SKP2-201ENST00000274254 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
SKP2-201ENST00000274254 APLP2Q06481 763 aa26.99■■□□□ 1.91
SKP2-201ENST00000274254 MAPKBP1O60336 1514 aa26.97■■□□□ 1.91
SKP2-201ENST00000274254 CDK11AQ9UQ88 783 aaPredicted RBP26.96■■□□□ 1.91
SKP2-201ENST00000274254 ASXL2Q76L83 1435 aa26.95■■□□□ 1.91
SKP2-201ENST00000274254 MAGI3Q5TCQ9 1506 aa26.95■■□□□ 1.9
SKP2-201ENST00000274254 PLEKHD1A6NEE1 506 aa26.93■■□□□ 1.9
SKP2-201ENST00000274254 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
SKP2-201ENST00000274254 WDR7Q9Y4E6 1490 aa26.92■■□□□ 1.9
SKP2-201ENST00000274254 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
SKP2-201ENST00000274254 KANK4Q5T7N3 995 aaPredicted RBP26.9■■□□□ 1.9
SKP2-201ENST00000274254 MTUS2Q5JR59 1369 aa26.89■■□□□ 1.89
SKP2-201ENST00000274254 EHBP1L1Q8N3D4 1523 aa26.88■■□□□ 1.89
SKP2-201ENST00000274254 KIF14Q15058 1648 aa26.78■■□□□ 1.88
SKP2-201ENST00000274254 KCNH8Q96L42 1107 aa26.78■■□□□ 1.88
SKP2-201ENST00000274254 ABCC10Q5T3U5 1492 aa26.77■■□□□ 1.88
SKP2-201ENST00000274254 SUPT6HQ7KZ85 1726 aaKnown RBP26.75■■□□□ 1.87
SKP2-201ENST00000274254 DIP2BQ9P265 1576 aa26.74■■□□□ 1.87
SKP2-201ENST00000274254 PPARGC1BQ86YN6 1023 aaKnown RBP26.74■■□□□ 1.87
SKP2-201ENST00000274254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.73■■□□□ 1.87
SKP2-201ENST00000274254 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
SKP2-201ENST00000274254 GLI2P10070 1586 aa26.72■■□□□ 1.87
SKP2-201ENST00000274254 ABCA9Q8IUA7 1624 aa26.71■■□□□ 1.87
SKP2-201ENST00000274254 TTC37Q6PGP7 1564 aa26.69■■□□□ 1.86
SKP2-201ENST00000274254 KIF13AQ9H1H9 1805 aa26.66■■□□□ 1.86
SKP2-201ENST00000274254 FAM69CQ0P6D2 419 aa26.65■■□□□ 1.86
SKP2-201ENST00000274254 MAP3K4Q9Y6R4 1608 aa26.62■■□□□ 1.85
SKP2-201ENST00000274254 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
SKP2-201ENST00000274254 CCNB3Q8WWL7 1395 aa26.61■■□□□ 1.85
SKP2-201ENST00000274254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.61■■□□□ 1.85
SKP2-201ENST00000274254 CDC42BPAQ5VT25 1732 aa26.6■■□□□ 1.85
SKP2-201ENST00000274254 CD109Q6YHK3 1445 aa26.59■■□□□ 1.85
SKP2-201ENST00000274254 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
SKP2-201ENST00000274254 PLCH2O75038 1416 aa26.58■■□□□ 1.85
SKP2-201ENST00000274254 MYOM3Q5VTT5 1437 aa26.57■■□□□ 1.84
SKP2-201ENST00000274254 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
SKP2-201ENST00000274254 ARAP3Q8WWN8 1544 aa26.56■■□□□ 1.84
SKP2-201ENST00000274254 ITSN2Q9NZM3 1697 aa26.56■■□□□ 1.84
SKP2-201ENST00000274254 CDC42BPBQ9Y5S2 1711 aa26.54■■□□□ 1.84
SKP2-201ENST00000274254 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
SKP2-201ENST00000274254 MIA2Q96PC5 1412 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms