RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
HERC6-202ENST00000273960 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
HERC6-202ENST00000273960 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
HERC6-202ENST00000273960 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
HERC6-202ENST00000273960 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
HERC6-202ENST00000273960 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
HERC6-202ENST00000273960 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
HERC6-202ENST00000273960 FANCIQ9NVI1 1328 aa17.86■□□□□ 0.45
HERC6-202ENST00000273960 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
HERC6-202ENST00000273960 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
HERC6-202ENST00000273960 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
HERC6-202ENST00000273960 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
HERC6-202ENST00000273960 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
HERC6-202ENST00000273960 CUX2O14529 1486 aa17.83■□□□□ 0.44
HERC6-202ENST00000273960 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
HERC6-202ENST00000273960 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
HERC6-202ENST00000273960 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
HERC6-202ENST00000273960 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
HERC6-202ENST00000273960 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
HERC6-202ENST00000273960 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
HERC6-202ENST00000273960 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
HERC6-202ENST00000273960 NESP48681 1621 aa17.73■□□□□ 0.43
HERC6-202ENST00000273960 CUX1P39880 1505 aa17.73■□□□□ 0.43
HERC6-202ENST00000273960 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.43
HERC6-202ENST00000273960 CFTRP13569 1480 aa17.71■□□□□ 0.43
HERC6-202ENST00000273960 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.42
HERC6-202ENST00000273960 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
HERC6-202ENST00000273960 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
HERC6-202ENST00000273960 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
HERC6-202ENST00000273960 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
HERC6-202ENST00000273960 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
HERC6-202ENST00000273960 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
HERC6-202ENST00000273960 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
HERC6-202ENST00000273960 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
HERC6-202ENST00000273960 FBLN2P98095 1184 aa17.65■□□□□ 0.42
HERC6-202ENST00000273960 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
HERC6-202ENST00000273960 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.42
HERC6-202ENST00000273960 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
HERC6-202ENST00000273960 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
HERC6-202ENST00000273960 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
HERC6-202ENST00000273960 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
HERC6-202ENST00000273960 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
HERC6-202ENST00000273960 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
HERC6-202ENST00000273960 IGF1RP08069 1367 aa17.62■□□□□ 0.41
HERC6-202ENST00000273960 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
HERC6-202ENST00000273960 KIF21BO75037 1637 aa17.6■□□□□ 0.41
HERC6-202ENST00000273960 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
HERC6-202ENST00000273960 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
HERC6-202ENST00000273960 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
HERC6-202ENST00000273960 MRS2Q9HD23 443 aa17.52■□□□□ 0.39
HERC6-202ENST00000273960 NEFMP07197 916 aa17.51■□□□□ 0.39
HERC6-202ENST00000273960 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
HERC6-202ENST00000273960 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
HERC6-202ENST00000273960 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
HERC6-202ENST00000273960 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
HERC6-202ENST00000273960 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
HERC6-202ENST00000273960 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
HERC6-202ENST00000273960 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
HERC6-202ENST00000273960 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
HERC6-202ENST00000273960 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
HERC6-202ENST00000273960 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
HERC6-202ENST00000273960 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
HERC6-202ENST00000273960 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
HERC6-202ENST00000273960 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
HERC6-202ENST00000273960 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
HERC6-202ENST00000273960 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
HERC6-202ENST00000273960 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
HERC6-202ENST00000273960 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
HERC6-202ENST00000273960 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
HERC6-202ENST00000273960 AKNAQ7Z591 1439 aa17.35■□□□□ 0.37
HERC6-202ENST00000273960 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
HERC6-202ENST00000273960 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
HERC6-202ENST00000273960 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
HERC6-202ENST00000273960 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
HERC6-202ENST00000273960 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
HERC6-202ENST00000273960 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
HERC6-202ENST00000273960 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
HERC6-202ENST00000273960 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
HERC6-202ENST00000273960 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.36
HERC6-202ENST00000273960 FOXD1Q16676 465 aa17.27■□□□□ 0.35
HERC6-202ENST00000273960 ARXQ96QS3 562 aa17.26■□□□□ 0.35
HERC6-202ENST00000273960 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
HERC6-202ENST00000273960 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
HERC6-202ENST00000273960 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
HERC6-202ENST00000273960 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
HERC6-202ENST00000273960 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
HERC6-202ENST00000273960 UBE2Q2Q8WVN8 375 aa17.25■□□□□ 0.35
HERC6-202ENST00000273960 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.35
HERC6-202ENST00000273960 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
HERC6-202ENST00000273960 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
HERC6-202ENST00000273960 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
HERC6-202ENST00000273960 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
HERC6-202ENST00000273960 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
HERC6-202ENST00000273960 PDE4AP27815 886 aa17.17■□□□□ 0.34
HERC6-202ENST00000273960 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
HERC6-202ENST00000273960 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
HERC6-202ENST00000273960 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
HERC6-202ENST00000273960 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
HERC6-202ENST00000273960 GSE1Q14687 1217 aa17.13■□□□□ 0.33
HERC6-202ENST00000273960 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms