RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
PRUNE1-201ENST00000271620 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
PRUNE1-201ENST00000271620 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
PRUNE1-201ENST00000271620 CLSPNQ9HAW4 1339 aa15.8■□□□□ 0.12
PRUNE1-201ENST00000271620 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
PRUNE1-201ENST00000271620 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
PRUNE1-201ENST00000271620 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
PRUNE1-201ENST00000271620 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
PRUNE1-201ENST00000271620 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
PRUNE1-201ENST00000271620 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
PRUNE1-201ENST00000271620 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
PRUNE1-201ENST00000271620 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
PRUNE1-201ENST00000271620 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
PRUNE1-201ENST00000271620 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
PRUNE1-201ENST00000271620 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
PRUNE1-201ENST00000271620 KCNH8Q96L42 1107 aa15.65■□□□□ 0.1
PRUNE1-201ENST00000271620 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
PRUNE1-201ENST00000271620 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
PRUNE1-201ENST00000271620 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
PRUNE1-201ENST00000271620 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
PRUNE1-201ENST00000271620 GAPVD1Q14C86 1478 aa15.6■□□□□ 0.09
PRUNE1-201ENST00000271620 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
PRUNE1-201ENST00000271620 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
PRUNE1-201ENST00000271620 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
PRUNE1-201ENST00000271620 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
PRUNE1-201ENST00000271620 CUL7Q14999 1698 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 FGD6Q6ZV73 1430 aa15.54■□□□□ 0.08
PRUNE1-201ENST00000271620 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
PRUNE1-201ENST00000271620 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
PRUNE1-201ENST00000271620 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
PRUNE1-201ENST00000271620 PPP1R15AO75807 674 aaPredicted RBP15.48■□□□□ 0.07
PRUNE1-201ENST00000271620 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
PRUNE1-201ENST00000271620 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
PRUNE1-201ENST00000271620 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
PRUNE1-201ENST00000271620 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
PRUNE1-201ENST00000271620 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
PRUNE1-201ENST00000271620 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 FOXD1Q16676 465 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 NAIPQ13075 1403 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
PRUNE1-201ENST00000271620 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
PRUNE1-201ENST00000271620 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
PRUNE1-201ENST00000271620 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
PRUNE1-201ENST00000271620 FBLN2P98095 1184 aa15.36■□□□□ 0.05
PRUNE1-201ENST00000271620 BCANQ96GW7 911 aa15.35■□□□□ 0.05
PRUNE1-201ENST00000271620 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
PRUNE1-201ENST00000271620 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PRUNE1-201ENST00000271620 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.05
PRUNE1-201ENST00000271620 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
PRUNE1-201ENST00000271620 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
PRUNE1-201ENST00000271620 ANP32CO43423 234 aa15.32■□□□□ 0.04
PRUNE1-201ENST00000271620 IQGAP2Q13576 1575 aa15.31■□□□□ 0.04
PRUNE1-201ENST00000271620 UGGT2Q9NYU1 1516 aa15.31■□□□□ 0.04
PRUNE1-201ENST00000271620 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
PRUNE1-201ENST00000271620 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
PRUNE1-201ENST00000271620 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
PRUNE1-201ENST00000271620 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.04
PRUNE1-201ENST00000271620 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
PRUNE1-201ENST00000271620 KDM6BO15054 1643 aa15.27■□□□□ 0.03
PRUNE1-201ENST00000271620 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
PRUNE1-201ENST00000271620 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 FKBP8Q14318 412 aa15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 WDR62O43379 1518 aa15.21■□□□□ 0.03
PRUNE1-201ENST00000271620 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 PRG4Q92954 1404 aaPredicted RBP15.18■□□□□ 0.02
PRUNE1-201ENST00000271620 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
PRUNE1-201ENST00000271620 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
PRUNE1-201ENST00000271620 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
PRUNE1-201ENST00000271620 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms