RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
PRUNE1-201ENST00000271620 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
PRUNE1-201ENST00000271620 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
PRUNE1-201ENST00000271620 CLSPNQ9HAW4 1339 aa15.8■□□□□ 0.12
PRUNE1-201ENST00000271620 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
PRUNE1-201ENST00000271620 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
PRUNE1-201ENST00000271620 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
PRUNE1-201ENST00000271620 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
PRUNE1-201ENST00000271620 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
PRUNE1-201ENST00000271620 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
PRUNE1-201ENST00000271620 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
PRUNE1-201ENST00000271620 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
PRUNE1-201ENST00000271620 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
PRUNE1-201ENST00000271620 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
PRUNE1-201ENST00000271620 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
PRUNE1-201ENST00000271620 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
PRUNE1-201ENST00000271620 KCNH8Q96L42 1107 aa15.65■□□□□ 0.1
PRUNE1-201ENST00000271620 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
PRUNE1-201ENST00000271620 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
PRUNE1-201ENST00000271620 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
PRUNE1-201ENST00000271620 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
PRUNE1-201ENST00000271620 GAPVD1Q14C86 1478 aa15.6■□□□□ 0.09
PRUNE1-201ENST00000271620 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
PRUNE1-201ENST00000271620 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
PRUNE1-201ENST00000271620 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
PRUNE1-201ENST00000271620 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
PRUNE1-201ENST00000271620 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
PRUNE1-201ENST00000271620 CUL7Q14999 1698 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
PRUNE1-201ENST00000271620 FGD6Q6ZV73 1430 aa15.54■□□□□ 0.08
PRUNE1-201ENST00000271620 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRUNE1-201ENST00000271620 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
PRUNE1-201ENST00000271620 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
PRUNE1-201ENST00000271620 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
PRUNE1-201ENST00000271620 PPP1R15AO75807 674 aaPredicted RBP15.48■□□□□ 0.07
PRUNE1-201ENST00000271620 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
PRUNE1-201ENST00000271620 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
PRUNE1-201ENST00000271620 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
PRUNE1-201ENST00000271620 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
PRUNE1-201ENST00000271620 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
PRUNE1-201ENST00000271620 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
PRUNE1-201ENST00000271620 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
PRUNE1-201ENST00000271620 FOXD1Q16676 465 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 NAIPQ13075 1403 aa15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
PRUNE1-201ENST00000271620 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
PRUNE1-201ENST00000271620 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
PRUNE1-201ENST00000271620 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
PRUNE1-201ENST00000271620 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
PRUNE1-201ENST00000271620 FBLN2P98095 1184 aa15.36■□□□□ 0.05
PRUNE1-201ENST00000271620 BCANQ96GW7 911 aa15.35■□□□□ 0.05
PRUNE1-201ENST00000271620 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
PRUNE1-201ENST00000271620 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
PRUNE1-201ENST00000271620 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.05
PRUNE1-201ENST00000271620 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
PRUNE1-201ENST00000271620 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
PRUNE1-201ENST00000271620 ANP32CO43423 234 aa15.32■□□□□ 0.04
PRUNE1-201ENST00000271620 IQGAP2Q13576 1575 aa15.31■□□□□ 0.04
PRUNE1-201ENST00000271620 UGGT2Q9NYU1 1516 aa15.31■□□□□ 0.04
PRUNE1-201ENST00000271620 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
PRUNE1-201ENST00000271620 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
PRUNE1-201ENST00000271620 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
PRUNE1-201ENST00000271620 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.04
PRUNE1-201ENST00000271620 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
PRUNE1-201ENST00000271620 KDM6BO15054 1643 aa15.27■□□□□ 0.03
PRUNE1-201ENST00000271620 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
PRUNE1-201ENST00000271620 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
PRUNE1-201ENST00000271620 FKBP8Q14318 412 aa15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
PRUNE1-201ENST00000271620 WDR62O43379 1518 aa15.21■□□□□ 0.03
PRUNE1-201ENST00000271620 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
PRUNE1-201ENST00000271620 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 TCOF1Q13428 1488 aaKnown RBP15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
PRUNE1-201ENST00000271620 PRG4Q92954 1404 aaPredicted RBP15.18■□□□□ 0.02
PRUNE1-201ENST00000271620 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
PRUNE1-201ENST00000271620 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
PRUNE1-201ENST00000271620 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
PRUNE1-201ENST00000271620 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms