RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
CDH2-201ENST00000269141 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
CDH2-201ENST00000269141 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
CDH2-201ENST00000269141 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
CDH2-201ENST00000269141 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
CDH2-201ENST00000269141 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
CDH2-201ENST00000269141 NEFLP07196 543 aa15.82■□□□□ 0.12
CDH2-201ENST00000269141 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
CDH2-201ENST00000269141 PODXL2Q9NZ53 605 aa15.82■□□□□ 0.12
CDH2-201ENST00000269141 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
CDH2-201ENST00000269141 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
CDH2-201ENST00000269141 CFTRP13569 1480 aa15.77■□□□□ 0.12
CDH2-201ENST00000269141 RRP7BPQ9NSQ0 103 aa15.77■□□□□ 0.11
CDH2-201ENST00000269141 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.11
CDH2-201ENST00000269141 BCANQ96GW7 911 aa15.76■□□□□ 0.11
CDH2-201ENST00000269141 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
CDH2-201ENST00000269141 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.75■□□□□ 0.11
CDH2-201ENST00000269141 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
CDH2-201ENST00000269141 IGF1RP08069 1367 aa15.71■□□□□ 0.11
CDH2-201ENST00000269141 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
CDH2-201ENST00000269141 PLEKHD1A6NEE1 506 aa15.67■□□□□ 0.1
CDH2-201ENST00000269141 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDH2-201ENST00000269141 FHOD3Q2V2M9 1422 aa15.67■□□□□ 0.1
CDH2-201ENST00000269141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.18e-12■■■□□ 15
CDH2-201ENST00000269141 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
CDH2-201ENST00000269141 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDH2-201ENST00000269141 CUX1P39880 1505 aa15.65■□□□□ 0.1
CDH2-201ENST00000269141 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
CDH2-201ENST00000269141 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.1
CDH2-201ENST00000269141 PKNOX2Q96KN3 472 aa15.64■□□□□ 0.1
CDH2-201ENST00000269141 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
CDH2-201ENST00000269141 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
CDH2-201ENST00000269141 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
CDH2-201ENST00000269141 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
CDH2-201ENST00000269141 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
CDH2-201ENST00000269141 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
CDH2-201ENST00000269141 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
CDH2-201ENST00000269141 CCNB3Q8WWL7 1395 aa15.55■□□□□ 0.08
CDH2-201ENST00000269141 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
CDH2-201ENST00000269141 KIF21BO75037 1637 aa15.55■□□□□ 0.08
CDH2-201ENST00000269141 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
CDH2-201ENST00000269141 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
CDH2-201ENST00000269141 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
CDH2-201ENST00000269141 NBR1Q14596 966 aa15.53■□□□□ 0.08
CDH2-201ENST00000269141 TONSLQ96HA7 1378 aa15.52■□□□□ 0.07
CDH2-201ENST00000269141 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
CDH2-201ENST00000269141 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
CDH2-201ENST00000269141 KDM2AQ9Y2K7 1162 aa15.49■□□□□ 0.07
CDH2-201ENST00000269141 CHGAP10645 457 aaKnown RBP15.49■□□□□ 0.07
CDH2-201ENST00000269141 A0A0U1RQG5 324 aaPredicted RBP15.49■□□□□ 0.07
CDH2-201ENST00000269141 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
CDH2-201ENST00000269141 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
CDH2-201ENST00000269141 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
CDH2-201ENST00000269141 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
CDH2-201ENST00000269141 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
CDH2-201ENST00000269141 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
CDH2-201ENST00000269141 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
CDH2-201ENST00000269141 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
CDH2-201ENST00000269141 FOXD1Q16676 465 aa15.43■□□□□ 0.06
CDH2-201ENST00000269141 RGL3Q3MIN7 710 aa15.42■□□□□ 0.06
CDH2-201ENST00000269141 CARMIL2Q6F5E8 1435 aa15.41■□□□□ 0.06
CDH2-201ENST00000269141 UBE2Q2Q8WVN8 375 aa15.41■□□□□ 0.06
CDH2-201ENST00000269141 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
CDH2-201ENST00000269141 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
CDH2-201ENST00000269141 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
CDH2-201ENST00000269141 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
CDH2-201ENST00000269141 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
CDH2-201ENST00000269141 ANP32CO43423 234 aa15.36■□□□□ 0.05
CDH2-201ENST00000269141 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
CDH2-201ENST00000269141 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
CDH2-201ENST00000269141 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.047e-7■■■■■ 40.2
CDH2-201ENST00000269141 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
CDH2-201ENST00000269141 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
CDH2-201ENST00000269141 MIER1Q8N108 512 aa15.32■□□□□ 0.04
CDH2-201ENST00000269141 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
CDH2-201ENST00000269141 ZNF644Q9H582 1327 aaPredicted RBP15.3■□□□□ 0.04
CDH2-201ENST00000269141 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
CDH2-201ENST00000269141 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
CDH2-201ENST00000269141 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
CDH2-201ENST00000269141 PTPRGP23470 1445 aa15.28■□□□□ 0.04
CDH2-201ENST00000269141 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
CDH2-201ENST00000269141 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
CDH2-201ENST00000269141 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
CDH2-201ENST00000269141 ERICH6BQ5W0A0 696 aa15.27■□□□□ 0.03
CDH2-201ENST00000269141 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
CDH2-201ENST00000269141 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
CDH2-201ENST00000269141 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
CDH2-201ENST00000269141 FKBP8Q14318 412 aa15.23■□□□□ 0.03
CDH2-201ENST00000269141 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
CDH2-201ENST00000269141 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
CDH2-201ENST00000269141 PKD2Q13563 968 aa15.2■□□□□ 0.02
CDH2-201ENST00000269141 MLECQ14165 292 aa15.2■□□□□ 0.02
CDH2-201ENST00000269141 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
CDH2-201ENST00000269141 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
CDH2-201ENST00000269141 GGT6Q6P531 493 aa15.19■□□□□ 0.02
CDH2-201ENST00000269141 MPHOSPH9Q99550 1183 aa15.18■□□□□ 0.02
CDH2-201ENST00000269141 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDH2-201ENST00000269141 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
CDH2-201ENST00000269141 PDE4CQ08493 712 aa15.18■□□□□ 0.02
CDH2-201ENST00000269141 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms