RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 APLP2Q06481 763 aa18.65■□□□□ 0.58
BEST3-201ENST00000266661 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
BEST3-201ENST00000266661 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
BEST3-201ENST00000266661 PBRM1Q86U86 1689 aa18.62■□□□□ 0.57
BEST3-201ENST00000266661 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
BEST3-201ENST00000266661 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
BEST3-201ENST00000266661 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
BEST3-201ENST00000266661 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
BEST3-201ENST00000266661 RRBP1Q9P2E9 1410 aaKnown RBP18.56■□□□□ 0.56
BEST3-201ENST00000266661 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
BEST3-201ENST00000266661 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
BEST3-201ENST00000266661 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
BEST3-201ENST00000266661 IGF1RP08069 1367 aa18.54■□□□□ 0.56
BEST3-201ENST00000266661 FBLN2P98095 1184 aa18.54■□□□□ 0.56
BEST3-201ENST00000266661 CHD1O14646 1710 aa18.52■□□□□ 0.56
BEST3-201ENST00000266661 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
BEST3-201ENST00000266661 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
BEST3-201ENST00000266661 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
BEST3-201ENST00000266661 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
BEST3-201ENST00000266661 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
BEST3-201ENST00000266661 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
BEST3-201ENST00000266661 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
BEST3-201ENST00000266661 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
BEST3-201ENST00000266661 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
BEST3-201ENST00000266661 MIER1Q8N108 512 aa18.39■□□□□ 0.54
BEST3-201ENST00000266661 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.53
BEST3-201ENST00000266661 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
BEST3-201ENST00000266661 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
BEST3-201ENST00000266661 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
BEST3-201ENST00000266661 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
BEST3-201ENST00000266661 CUL7Q14999 1698 aa18.34■□□□□ 0.53
BEST3-201ENST00000266661 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
BEST3-201ENST00000266661 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
BEST3-201ENST00000266661 LRRC9Q6ZRR7 1453 aa18.29■□□□□ 0.52
BEST3-201ENST00000266661 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
BEST3-201ENST00000266661 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
BEST3-201ENST00000266661 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
BEST3-201ENST00000266661 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
BEST3-201ENST00000266661 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
BEST3-201ENST00000266661 NUP160Q12769 1436 aa18.21■□□□□ 0.51
BEST3-201ENST00000266661 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
BEST3-201ENST00000266661 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
BEST3-201ENST00000266661 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
BEST3-201ENST00000266661 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
BEST3-201ENST00000266661 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
BEST3-201ENST00000266661 FYCO1Q9BQS8 1478 aa18.16■□□□□ 0.5
BEST3-201ENST00000266661 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
BEST3-201ENST00000266661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
BEST3-201ENST00000266661 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
BEST3-201ENST00000266661 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
BEST3-201ENST00000266661 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
BEST3-201ENST00000266661 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
BEST3-201ENST00000266661 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
BEST3-201ENST00000266661 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
BEST3-201ENST00000266661 ITGAEP38570 1179 aa18.1■□□□□ 0.49
BEST3-201ENST00000266661 JPH4Q96JJ6 628 aa18.1■□□□□ 0.49
BEST3-201ENST00000266661 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
BEST3-201ENST00000266661 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
BEST3-201ENST00000266661 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
BEST3-201ENST00000266661 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
BEST3-201ENST00000266661 IQGAP2Q13576 1575 aa18.06■□□□□ 0.48
BEST3-201ENST00000266661 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
BEST3-201ENST00000266661 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
BEST3-201ENST00000266661 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
BEST3-201ENST00000266661 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
BEST3-201ENST00000266661 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
BEST3-201ENST00000266661 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
BEST3-201ENST00000266661 FGD6Q6ZV73 1430 aa17.98■□□□□ 0.47
BEST3-201ENST00000266661 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
BEST3-201ENST00000266661 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
BEST3-201ENST00000266661 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
BEST3-201ENST00000266661 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
BEST3-201ENST00000266661 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
BEST3-201ENST00000266661 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
BEST3-201ENST00000266661 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
BEST3-201ENST00000266661 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
BEST3-201ENST00000266661 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
BEST3-201ENST00000266661 NCOA2Q15596 1464 aa17.87■□□□□ 0.45
BEST3-201ENST00000266661 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
BEST3-201ENST00000266661 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
BEST3-201ENST00000266661 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
BEST3-201ENST00000266661 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
BEST3-201ENST00000266661 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
BEST3-201ENST00000266661 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
BEST3-201ENST00000266661 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
BEST3-201ENST00000266661 NAIPQ13075 1403 aa17.83■□□□□ 0.45
BEST3-201ENST00000266661 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
BEST3-201ENST00000266661 SUPT6HQ7KZ85 1726 aaKnown RBP17.82■□□□□ 0.44
BEST3-201ENST00000266661 PTPRGP23470 1445 aa17.82■□□□□ 0.44
BEST3-201ENST00000266661 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
BEST3-201ENST00000266661 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
BEST3-201ENST00000266661 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
BEST3-201ENST00000266661 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.44
BEST3-201ENST00000266661 PLB1Q6P1J6 1458 aa17.77■□□□□ 0.44
BEST3-201ENST00000266661 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
BEST3-201ENST00000266661 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
BEST3-201ENST00000266661 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
BEST3-201ENST00000266661 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
BEST3-201ENST00000266661 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
BEST3-201ENST00000266661 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms