RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SHROOM2Q13796 1616 aa23.5■■□□□ 1.35
SSBP1-201ENST00000265304 CTTNBP2Q8WZ74 1663 aa23.49■■□□□ 1.35
SSBP1-201ENST00000265304 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
SSBP1-201ENST00000265304 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
SSBP1-201ENST00000265304 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
SSBP1-201ENST00000265304 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
SSBP1-201ENST00000265304 UGGT2Q9NYU1 1516 aa23.38■■□□□ 1.33
SSBP1-201ENST00000265304 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
SSBP1-201ENST00000265304 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
SSBP1-201ENST00000265304 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
SSBP1-201ENST00000265304 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
SSBP1-201ENST00000265304 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
SSBP1-201ENST00000265304 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
SSBP1-201ENST00000265304 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
SSBP1-201ENST00000265304 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
SSBP1-201ENST00000265304 SAMD9Q5K651 1589 aa23.24■■□□□ 1.31
SSBP1-201ENST00000265304 ERCC6L2Q5T890 1561 aa23.24■■□□□ 1.31
SSBP1-201ENST00000265304 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
SSBP1-201ENST00000265304 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
SSBP1-201ENST00000265304 KIAA0556O60303 1618 aa23.2■■□□□ 1.3
SSBP1-201ENST00000265304 EFCAB5A4FU69 1503 aa23.19■■□□□ 1.3
SSBP1-201ENST00000265304 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
SSBP1-201ENST00000265304 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
SSBP1-201ENST00000265304 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
SSBP1-201ENST00000265304 PTPRGP23470 1445 aa23.07■■□□□ 1.28
SSBP1-201ENST00000265304 CLIP1P30622 1438 aa23.06■■□□□ 1.28
SSBP1-201ENST00000265304 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
SSBP1-201ENST00000265304 FHOD3Q2V2M9 1422 aa22.99■■□□□ 1.27
SSBP1-201ENST00000265304 UHRF1BP1LA0JNW5 1464 aa22.98■■□□□ 1.27
SSBP1-201ENST00000265304 ABCA8O94911 1581 aa22.97■■□□□ 1.27
SSBP1-201ENST00000265304 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
SSBP1-201ENST00000265304 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
SSBP1-201ENST00000265304 UACAQ9BZF9 1416 aa22.95■■□□□ 1.26
SSBP1-201ENST00000265304 FMN1Q68DA7 1419 aa22.94■■□□□ 1.26
SSBP1-201ENST00000265304 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
SSBP1-201ENST00000265304 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
SSBP1-201ENST00000265304 ABCC2Q92887 1545 aa22.91■■□□□ 1.26
SSBP1-201ENST00000265304 PLB1Q6P1J6 1458 aa22.9■■□□□ 1.26
SSBP1-201ENST00000265304 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
SSBP1-201ENST00000265304 KDM5BQ9UGL1 1544 aa22.86■■□□□ 1.25
SSBP1-201ENST00000265304 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.25
SSBP1-201ENST00000265304 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
SSBP1-201ENST00000265304 FYCO1Q9BQS8 1478 aa22.79■■□□□ 1.24
SSBP1-201ENST00000265304 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
SSBP1-201ENST00000265304 ATP10BO94823 1461 aa22.77■■□□□ 1.24
SSBP1-201ENST00000265304 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
SSBP1-201ENST00000265304 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
SSBP1-201ENST00000265304 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
SSBP1-201ENST00000265304 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
SSBP1-201ENST00000265304 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
SSBP1-201ENST00000265304 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
SSBP1-201ENST00000265304 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
SSBP1-201ENST00000265304 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
SSBP1-201ENST00000265304 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
SSBP1-201ENST00000265304 MAP3K1Q13233 1512 aa22.66■■□□□ 1.22
SSBP1-201ENST00000265304 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
SSBP1-201ENST00000265304 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
SSBP1-201ENST00000265304 WDR7Q9Y4E6 1490 aa22.59■■□□□ 1.21
SSBP1-201ENST00000265304 CFAP43Q8NDM7 1665 aa22.57■■□□□ 1.2
SSBP1-201ENST00000265304 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
SSBP1-201ENST00000265304 ABCC10Q5T3U5 1492 aa22.55■■□□□ 1.2
SSBP1-201ENST00000265304 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
SSBP1-201ENST00000265304 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
SSBP1-201ENST00000265304 GLI2P10070 1586 aa22.55■■□□□ 1.2
SSBP1-201ENST00000265304 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
SSBP1-201ENST00000265304 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
SSBP1-201ENST00000265304 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.2
SSBP1-201ENST00000265304 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
SSBP1-201ENST00000265304 DIP2BQ9P265 1576 aa22.51■■□□□ 1.19
SSBP1-201ENST00000265304 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
SSBP1-201ENST00000265304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
SSBP1-201ENST00000265304 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
SSBP1-201ENST00000265304 LRRC9Q6ZRR7 1453 aa22.46■■□□□ 1.19
SSBP1-201ENST00000265304 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
SSBP1-201ENST00000265304 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
SSBP1-201ENST00000265304 MAP3K4Q9Y6R4 1608 aa22.42■■□□□ 1.18
SSBP1-201ENST00000265304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.182e-6■□□□□ 8.3
SSBP1-201ENST00000265304 MTUS2Q5JR59 1369 aa22.39■■□□□ 1.18
SSBP1-201ENST00000265304 KIF14Q15058 1648 aa22.39■■□□□ 1.18
SSBP1-201ENST00000265304 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.17
SSBP1-201ENST00000265304 APLP2Q06481 763 aa22.38■■□□□ 1.17
SSBP1-201ENST00000265304 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
SSBP1-201ENST00000265304 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
SSBP1-201ENST00000265304 SUPT6HQ7KZ85 1726 aaKnown RBP22.35■■□□□ 1.17
SSBP1-201ENST00000265304 ARAP3Q8WWN8 1544 aa22.35■■□□□ 1.17
SSBP1-201ENST00000265304 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
SSBP1-201ENST00000265304 PPRC1Q5VV67 1664 aaKnown RBP22.33■■□□□ 1.17
SSBP1-201ENST00000265304 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
SSBP1-201ENST00000265304 NCOA2Q15596 1464 aa22.3■■□□□ 1.16
SSBP1-201ENST00000265304 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
SSBP1-201ENST00000265304 MYO5CQ9NQX4 1742 aa22.3■■□□□ 1.16
SSBP1-201ENST00000265304 PLCH2O75038 1416 aa22.3■■□□□ 1.16
SSBP1-201ENST00000265304 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
SSBP1-201ENST00000265304 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
SSBP1-201ENST00000265304 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
SSBP1-201ENST00000265304 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
SSBP1-201ENST00000265304 TSPOAP1O95153 1857 aa22.25■■□□□ 1.15
SSBP1-201ENST00000265304 PHLDB1Q86UU1 1377 aa22.24■■□□□ 1.15
SSBP1-201ENST00000265304 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
SSBP1-201ENST00000265304 ITSN2Q9NZM3 1697 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms