RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
LSG1-201ENST00000265245 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
LSG1-201ENST00000265245 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
LSG1-201ENST00000265245 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
LSG1-201ENST00000265245 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
LSG1-201ENST00000265245 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.02
LSG1-201ENST00000265245 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
LSG1-201ENST00000265245 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
LSG1-201ENST00000265245 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
LSG1-201ENST00000265245 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
LSG1-201ENST00000265245 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
LSG1-201ENST00000265245 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
LSG1-201ENST00000265245 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
LSG1-201ENST00000265245 ITGAEP38570 1179 aa15.14■□□□□ 0.01
LSG1-201ENST00000265245 P3H3Q8IVL6 736 aa15.14■□□□□ 0.01
LSG1-201ENST00000265245 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
LSG1-201ENST00000265245 CUL7Q14999 1698 aa15.12■□□□□ 0.01
LSG1-201ENST00000265245 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
LSG1-201ENST00000265245 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
LSG1-201ENST00000265245 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
LSG1-201ENST00000265245 FHOD3Q2V2M9 1422 aa15.09■□□□□ 0.01
LSG1-201ENST00000265245 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
LSG1-201ENST00000265245 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
LSG1-201ENST00000265245 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
LSG1-201ENST00000265245 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
LSG1-201ENST00000265245 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
LSG1-201ENST00000265245 PHLDB1Q86UU1 1377 aa15.06■□□□□ 0
LSG1-201ENST00000265245 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
LSG1-201ENST00000265245 CASKIN1Q8WXD9 1431 aa15.05■□□□□ 0
LSG1-201ENST00000265245 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -0
LSG1-201ENST00000265245 RAB3GAP2Q9H2M9 1393 aa15.04■□□□□ -0
LSG1-201ENST00000265245 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
LSG1-201ENST00000265245 FMN1Q68DA7 1419 aa15.04■□□□□ -0
LSG1-201ENST00000265245 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
LSG1-201ENST00000265245 GAPVD1Q14C86 1478 aa15.04■□□□□ -0
LSG1-201ENST00000265245 MIER1Q8N108 512 aa15.03■□□□□ -0
LSG1-201ENST00000265245 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
LSG1-201ENST00000265245 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
LSG1-201ENST00000265245 ZNF608Q9ULD9 1512 aaPredicted RBP15□□□□□ -0.01
LSG1-201ENST00000265245 BCL11AQ9H165 835 aa15□□□□□ -0.01
LSG1-201ENST00000265245 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
LSG1-201ENST00000265245 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
LSG1-201ENST00000265245 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.01
LSG1-201ENST00000265245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.02
LSG1-201ENST00000265245 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
LSG1-201ENST00000265245 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
LSG1-201ENST00000265245 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
LSG1-201ENST00000265245 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
LSG1-201ENST00000265245 SAMD9Q5K651 1589 aa14.92□□□□□ -0.02
LSG1-201ENST00000265245 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
LSG1-201ENST00000265245 MAGI1Q96QZ7 1491 aaPredicted RBP14.9□□□□□ -0.02
LSG1-201ENST00000265245 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
LSG1-201ENST00000265245 NCOA2Q15596 1464 aa14.83□□□□□ -0.04
LSG1-201ENST00000265245 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
LSG1-201ENST00000265245 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
LSG1-201ENST00000265245 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
LSG1-201ENST00000265245 CHD1O14646 1710 aa14.82□□□□□ -0.04
LSG1-201ENST00000265245 CCDC18Q5T9S5 1454 aa14.81□□□□□ -0.04
LSG1-201ENST00000265245 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
LSG1-201ENST00000265245 IQGAP2Q13576 1575 aa14.79□□□□□ -0.04
LSG1-201ENST00000265245 HFM1A2PYH4 1435 aa14.79□□□□□ -0.04
LSG1-201ENST00000265245 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
LSG1-201ENST00000265245 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
LSG1-201ENST00000265245 HECW1Q76N89 1606 aa14.76□□□□□ -0.05
LSG1-201ENST00000265245 PTPRKQ15262 1439 aa14.76□□□□□ -0.05
LSG1-201ENST00000265245 LRRIQ1Q96JM4 1722 aa14.75□□□□□ -0.05
LSG1-201ENST00000265245 UGGT2Q9NYU1 1516 aa14.75□□□□□ -0.05
LSG1-201ENST00000265245 CEP170Q5SW79 1584 aa14.75□□□□□ -0.05
LSG1-201ENST00000265245 NUP160Q12769 1436 aa14.75□□□□□ -0.05
LSG1-201ENST00000265245 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
LSG1-201ENST00000265245 NAIPQ13075 1403 aa14.73□□□□□ -0.05
LSG1-201ENST00000265245 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
LSG1-201ENST00000265245 EPRSP07814 1512 aaKnown RBP14.72□□□□□ -0.05
LSG1-201ENST00000265245 SHROOM2Q13796 1616 aa14.72□□□□□ -0.05
LSG1-201ENST00000265245 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
LSG1-201ENST00000265245 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
LSG1-201ENST00000265245 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
LSG1-201ENST00000265245 TONSLQ96HA7 1378 aa14.72□□□□□ -0.05
LSG1-201ENST00000265245 MAGI3Q5TCQ9 1506 aa14.71□□□□□ -0.05
LSG1-201ENST00000265245 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
LSG1-201ENST00000265245 TCOF1Q13428 1488 aaKnown RBP14.68□□□□□ -0.06
LSG1-201ENST00000265245 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
LSG1-201ENST00000265245 ARID3CA6NKF2 412 aa14.67□□□□□ -0.06
LSG1-201ENST00000265245 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
LSG1-201ENST00000265245 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
LSG1-201ENST00000265245 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
LSG1-201ENST00000265245 DDX10Q13206 875 aaKnown RBP14.65□□□□□ -0.06
LSG1-201ENST00000265245 AKNAQ7Z591 1439 aa14.64□□□□□ -0.07
LSG1-201ENST00000265245 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
LSG1-201ENST00000265245 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
LSG1-201ENST00000265245 KIAA0556O60303 1618 aa14.62□□□□□ -0.07
LSG1-201ENST00000265245 TRIM52Q96A61 297 aa14.62□□□□□ -0.07
LSG1-201ENST00000265245 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
LSG1-201ENST00000265245 HIRIP3Q9BW71 556 aaPredicted RBP14.59□□□□□ -0.07
LSG1-201ENST00000265245 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.08
LSG1-201ENST00000265245 GCC2Q8IWJ2 1684 aa14.57□□□□□ -0.08
LSG1-201ENST00000265245 FBLN2P98095 1184 aa14.55□□□□□ -0.08
LSG1-201ENST00000265245 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
LSG1-201ENST00000265245 ANP32CO43423 234 aa14.54□□□□□ -0.08
LSG1-201ENST00000265245 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms