RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
CHCHD3-201ENST00000262570 EHMT2Q96KQ7 1210 aa27.23■■□□□ 1.95
CHCHD3-201ENST00000262570 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
CHCHD3-201ENST00000262570 UBTFP17480 764 aaKnown RBP27.17■■□□□ 1.94
CHCHD3-201ENST00000262570 IQGAP2Q13576 1575 aa27.16■■□□□ 1.94
CHCHD3-201ENST00000262570 SHROOM2Q13796 1616 aa27.14■■□□□ 1.94
CHCHD3-201ENST00000262570 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.93
CHCHD3-201ENST00000262570 PRG4Q92954 1404 aaPredicted RBP27.07■■□□□ 1.92
CHCHD3-201ENST00000262570 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
CHCHD3-201ENST00000262570 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
CHCHD3-201ENST00000262570 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
CHCHD3-201ENST00000262570 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.91
CHCHD3-201ENST00000262570 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
CHCHD3-201ENST00000262570 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
CHCHD3-201ENST00000262570 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
CHCHD3-201ENST00000262570 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
CHCHD3-201ENST00000262570 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
CHCHD3-201ENST00000262570 CARMIL2Q6F5E8 1435 aa26.97■■□□□ 1.91
CHCHD3-201ENST00000262570 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
CHCHD3-201ENST00000262570 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
CHCHD3-201ENST00000262570 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
CHCHD3-201ENST00000262570 SAMD9Q5K651 1589 aa26.87■■□□□ 1.89
CHCHD3-201ENST00000262570 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
CHCHD3-201ENST00000262570 EFCAB5A4FU69 1503 aa26.84■■□□□ 1.89
CHCHD3-201ENST00000262570 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
CHCHD3-201ENST00000262570 PTPRGP23470 1445 aa26.82■■□□□ 1.88
CHCHD3-201ENST00000262570 ARHGAP35Q9NRY4 1499 aa26.8■■□□□ 1.88
CHCHD3-201ENST00000262570 CLIP1P30622 1438 aa26.79■■□□□ 1.88
CHCHD3-201ENST00000262570 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
CHCHD3-201ENST00000262570 CEP162Q5TB80 1403 aa26.77■■□□□ 1.88
CHCHD3-201ENST00000262570 FHOD3Q2V2M9 1422 aa26.76■■□□□ 1.87
CHCHD3-201ENST00000262570 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
CHCHD3-201ENST00000262570 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
CHCHD3-201ENST00000262570 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
CHCHD3-201ENST00000262570 ABCA8O94911 1581 aa26.59■■□□□ 1.85
CHCHD3-201ENST00000262570 UHRF1BP1LA0JNW5 1464 aa26.59■■□□□ 1.85
CHCHD3-201ENST00000262570 ADCY10Q96PN6 1610 aa26.58■■□□□ 1.84
CHCHD3-201ENST00000262570 ABCC2Q92887 1545 aa26.57■■□□□ 1.84
CHCHD3-201ENST00000262570 RAPGEF6Q8TEU7 1601 aa26.52■■□□□ 1.84
CHCHD3-201ENST00000262570 NPM1P06748 294 aaKnown RBP eCLIP26.48■■□□□ 1.83
CHCHD3-201ENST00000262570 KDM5BQ9UGL1 1544 aa26.47■■□□□ 1.83
CHCHD3-201ENST00000262570 NUP153P49790 1475 aaKnown RBP26.46■■□□□ 1.83
CHCHD3-201ENST00000262570 CASKIN1Q8WXD9 1431 aa26.45■■□□□ 1.83
CHCHD3-201ENST00000262570 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
CHCHD3-201ENST00000262570 ATP1B4Q9UN42 357 aaPredicted RBP26.41■■□□□ 1.82
CHCHD3-201ENST00000262570 ATP10BO94823 1461 aa26.41■■□□□ 1.82
CHCHD3-201ENST00000262570 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
CHCHD3-201ENST00000262570 PCF11O94913 1555 aaKnown RBP26.4■■□□□ 1.82
CHCHD3-201ENST00000262570 FYCO1Q9BQS8 1478 aa26.39■■□□□ 1.82
CHCHD3-201ENST00000262570 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
CHCHD3-201ENST00000262570 ZCCHC11Q5TAX3 1644 aaKnown RBP26.37■■□□□ 1.81
CHCHD3-201ENST00000262570 EPRSP07814 1512 aaKnown RBP26.35■■□□□ 1.81
CHCHD3-201ENST00000262570 MAPKBP1O60336 1514 aa26.33■■□□□ 1.81
CHCHD3-201ENST00000262570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.8
CHCHD3-201ENST00000262570 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.8
CHCHD3-201ENST00000262570 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
CHCHD3-201ENST00000262570 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
CHCHD3-201ENST00000262570 CCDC18Q5T9S5 1454 aa26.28■■□□□ 1.8
CHCHD3-201ENST00000262570 LRRIQ1Q96JM4 1722 aa26.26■■□□□ 1.79
CHCHD3-201ENST00000262570 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
CHCHD3-201ENST00000262570 WDR7Q9Y4E6 1490 aa26.23■■□□□ 1.79
CHCHD3-201ENST00000262570 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
CHCHD3-201ENST00000262570 ABCC10Q5T3U5 1492 aa26.18■■□□□ 1.78
CHCHD3-201ENST00000262570 KCNH8Q96L42 1107 aa26.16■■□□□ 1.78
CHCHD3-201ENST00000262570 MAP3K1Q13233 1512 aa26.13■■□□□ 1.77
CHCHD3-201ENST00000262570 TROQ12816 1431 aaPredicted RBP26.13■■□□□ 1.77
CHCHD3-201ENST00000262570 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
CHCHD3-201ENST00000262570 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
CHCHD3-201ENST00000262570 APLP2Q06481 763 aa26.12■■□□□ 1.77
CHCHD3-201ENST00000262570 TIAM1Q13009 1591 aa26.11■■□□□ 1.77
CHCHD3-201ENST00000262570 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
CHCHD3-201ENST00000262570 DIP2BQ9P265 1576 aa26.11■■□□□ 1.77
CHCHD3-201ENST00000262570 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
CHCHD3-201ENST00000262570 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
CHCHD3-201ENST00000262570 GLI2P10070 1586 aa26.07■■□□□ 1.76
CHCHD3-201ENST00000262570 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
CHCHD3-201ENST00000262570 KIF13AQ9H1H9 1805 aa26.04■■□□□ 1.76
CHCHD3-201ENST00000262570 LRRC9Q6ZRR7 1453 aa26.03■■□□□ 1.76
CHCHD3-201ENST00000262570 EHBP1L1Q8N3D4 1523 aa26■■□□□ 1.75
CHCHD3-201ENST00000262570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.99■■□□□ 1.752e-6■■■□□ 15.1
CHCHD3-201ENST00000262570 KIF14Q15058 1648 aa25.98■■□□□ 1.75
CHCHD3-201ENST00000262570 ABCA9Q8IUA7 1624 aa25.98■■□□□ 1.75
CHCHD3-201ENST00000262570 CD109Q6YHK3 1445 aa25.96■■□□□ 1.75
CHCHD3-201ENST00000262570 MAP3K4Q9Y6R4 1608 aa25.95■■□□□ 1.74
CHCHD3-201ENST00000262570 TTC37Q6PGP7 1564 aa25.93■■□□□ 1.74
CHCHD3-201ENST00000262570 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
CHCHD3-201ENST00000262570 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
CHCHD3-201ENST00000262570 PLCH2O75038 1416 aa25.87■■□□□ 1.73
CHCHD3-201ENST00000262570 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
CHCHD3-201ENST00000262570 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.73
CHCHD3-201ENST00000262570 TSPOAP1O95153 1857 aa25.83■■□□□ 1.73
CHCHD3-201ENST00000262570 GPATCH8Q9UKJ3 1502 aaKnown RBP25.83■■□□□ 1.73
CHCHD3-201ENST00000262570 PPARGC1BQ86YN6 1023 aaKnown RBP25.82■■□□□ 1.72
CHCHD3-201ENST00000262570 TEX14Q8IWB6 1497 aa25.81■■□□□ 1.72
CHCHD3-201ENST00000262570 ARAP3Q8WWN8 1544 aa25.8■■□□□ 1.72
CHCHD3-201ENST00000262570 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
CHCHD3-201ENST00000262570 EFCAB2Q5VUJ9 269 aa25.78■■□□□ 1.72
CHCHD3-201ENST00000262570 FANCAO15360 1455 aa25.77■■□□□ 1.72
CHCHD3-201ENST00000262570 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.72
CHCHD3-201ENST00000262570 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms