RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 PHLDB1Q86UU1 1377 aa28.17■■■□□ 2.1
SMAD7-201ENST00000262158 RAB3GAP2Q9H2M9 1393 aa28.15■■■□□ 2.1
SMAD7-201ENST00000262158 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
SMAD7-201ENST00000262158 SIN3AQ96ST3 1273 aa28.12■■■□□ 2.09
SMAD7-201ENST00000262158 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
SMAD7-201ENST00000262158 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
SMAD7-201ENST00000262158 HIRIP3Q9BW71 556 aaPredicted RBP28.05■■■□□ 2.08
SMAD7-201ENST00000262158 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
SMAD7-201ENST00000262158 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
SMAD7-201ENST00000262158 KCNH8Q96L42 1107 aa28.01■■■□□ 2.07
SMAD7-201ENST00000262158 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.07
SMAD7-201ENST00000262158 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
SMAD7-201ENST00000262158 CLSPNQ9HAW4 1339 aa27.99■■■□□ 2.07
SMAD7-201ENST00000262158 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
SMAD7-201ENST00000262158 MAPKBP1O60336 1514 aa27.93■■■□□ 2.06
SMAD7-201ENST00000262158 SETD5Q9C0A6 1442 aa27.9■■■□□ 2.06
SMAD7-201ENST00000262158 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
SMAD7-201ENST00000262158 URB2Q14146 1524 aaKnown RBP27.86■■■□□ 2.05
SMAD7-201ENST00000262158 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
SMAD7-201ENST00000262158 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
SMAD7-201ENST00000262158 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
SMAD7-201ENST00000262158 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
SMAD7-201ENST00000262158 MAP3K1Q13233 1512 aa27.73■■■□□ 2.03
SMAD7-201ENST00000262158 CFAP43Q8NDM7 1665 aa27.71■■■□□ 2.03
SMAD7-201ENST00000262158 MTUS2Q5JR59 1369 aa27.71■■■□□ 2.03
SMAD7-201ENST00000262158 CASKIN1Q8WXD9 1431 aa27.69■■■□□ 2.02
SMAD7-201ENST00000262158 CHIC2Q9UKJ5 165 aa27.69■■■□□ 2.02
SMAD7-201ENST00000262158 PTPRKQ15262 1439 aa27.68■■■□□ 2.02
SMAD7-201ENST00000262158 FYCO1Q9BQS8 1478 aa27.66■■■□□ 2.02
SMAD7-201ENST00000262158 GAPVD1Q14C86 1478 aa27.66■■■□□ 2.02
SMAD7-201ENST00000262158 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
SMAD7-201ENST00000262158 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
SMAD7-201ENST00000262158 FGD6Q6ZV73 1430 aa27.61■■■□□ 2.01
SMAD7-201ENST00000262158 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
SMAD7-201ENST00000262158 CUL7Q14999 1698 aa27.58■■■□□ 2.01
SMAD7-201ENST00000262158 FMN1Q68DA7 1419 aa27.57■■■□□ 2
SMAD7-201ENST00000262158 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 2
SMAD7-201ENST00000262158 EFCAB5A4FU69 1503 aa27.56■■■□□ 2
SMAD7-201ENST00000262158 LRRIQ1Q96JM4 1722 aa27.56■■■□□ 2
SMAD7-201ENST00000262158 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
SMAD7-201ENST00000262158 SUPT16HQ9Y5B9 1047 aaKnown RBP27.54■■■□□ 2
SMAD7-201ENST00000262158 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
SMAD7-201ENST00000262158 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
SMAD7-201ENST00000262158 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
SMAD7-201ENST00000262158 NCOA2Q15596 1464 aa27.5■■□□□ 1.99
SMAD7-201ENST00000262158 ABCA5Q8WWZ7 1642 aa27.5■■□□□ 1.99
SMAD7-201ENST00000262158 BCANQ96GW7 911 aa27.49■■□□□ 1.99
SMAD7-201ENST00000262158 CCDC18Q5T9S5 1454 aa27.48■■□□□ 1.99
SMAD7-201ENST00000262158 FOXD1Q16676 465 aa27.47■■□□□ 1.99
SMAD7-201ENST00000262158 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
SMAD7-201ENST00000262158 TONSLQ96HA7 1378 aa27.44■■□□□ 1.98
SMAD7-201ENST00000262158 TRIM52Q96A61 297 aa27.43■■□□□ 1.98
SMAD7-201ENST00000262158 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
SMAD7-201ENST00000262158 SAMD9Q5K651 1589 aa27.4■■□□□ 1.98
SMAD7-201ENST00000262158 MYOM3Q5VTT5 1437 aa27.39■■□□□ 1.98
SMAD7-201ENST00000262158 NAIPQ13075 1403 aa27.38■■□□□ 1.97
SMAD7-201ENST00000262158 CDK13Q14004 1512 aaKnown RBP27.37■■□□□ 1.97
SMAD7-201ENST00000262158 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
SMAD7-201ENST00000262158 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
SMAD7-201ENST00000262158 HFM1A2PYH4 1435 aa27.33■■□□□ 1.97
SMAD7-201ENST00000262158 ZNF608Q9ULD9 1512 aaPredicted RBP27.32■■□□□ 1.96
SMAD7-201ENST00000262158 ZNF644Q9H582 1327 aaPredicted RBP27.3■■□□□ 1.96
SMAD7-201ENST00000262158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.29■■□□□ 1.96
SMAD7-201ENST00000262158 UACAQ9BZF9 1416 aa27.29■■□□□ 1.96
SMAD7-201ENST00000262158 KDM6BO15054 1643 aa27.26■■□□□ 1.95
SMAD7-201ENST00000262158 SUPT6HQ7KZ85 1726 aaKnown RBP27.25■■□□□ 1.95
SMAD7-201ENST00000262158 FBLN2P98095 1184 aa27.24■■□□□ 1.95
SMAD7-201ENST00000262158 ANP32CO43423 234 aa27.23■■□□□ 1.95
SMAD7-201ENST00000262158 FKBP8Q14318 412 aa27.22■■□□□ 1.95
SMAD7-201ENST00000262158 UGGT2Q9NYU1 1516 aa27.21■■□□□ 1.95
SMAD7-201ENST00000262158 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
SMAD7-201ENST00000262158 EPRSP07814 1512 aaKnown RBP27.2■■□□□ 1.94
SMAD7-201ENST00000262158 TIMELESSQ9UNS1 1208 aa27.2■■□□□ 1.94
SMAD7-201ENST00000262158 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
SMAD7-201ENST00000262158 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
SMAD7-201ENST00000262158 IQGAP2Q13576 1575 aa27.17■■□□□ 1.94
SMAD7-201ENST00000262158 CNGB1Q14028 1251 aaPredicted RBP27.17■■□□□ 1.94
SMAD7-201ENST00000262158 DENND4BO75064 1496 aaPredicted RBP27.16■■□□□ 1.94
SMAD7-201ENST00000262158 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
SMAD7-201ENST00000262158 MPHOSPH9Q99550 1183 aa27.14■■□□□ 1.93
SMAD7-201ENST00000262158 ZNF777Q9ULD5 760 aaPredicted RBP27.12■■□□□ 1.93
SMAD7-201ENST00000262158 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
SMAD7-201ENST00000262158 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
SMAD7-201ENST00000262158 KDM5BQ9UGL1 1544 aa27.1■■□□□ 1.93
SMAD7-201ENST00000262158 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
SMAD7-201ENST00000262158 ARHGEF11O15085 1522 aa27.08■■□□□ 1.93
SMAD7-201ENST00000262158 MYT1Q01538 1121 aa27.07■■□□□ 1.92
SMAD7-201ENST00000262158 WASHC2AQ641Q2 1341 aa27.07■■□□□ 1.92
SMAD7-201ENST00000262158 HECW1Q76N89 1606 aa27.07■■□□□ 1.92
SMAD7-201ENST00000262158 C11orf95C9JLR9 678 aaPredicted RBP27.06■■□□□ 1.92
SMAD7-201ENST00000262158 TSHZ2Q9NRE2 1034 aa27.05■■□□□ 1.92
SMAD7-201ENST00000262158 CCDC184Q52MB2 194 aa27.04■■□□□ 1.92
SMAD7-201ENST00000262158 WDR62O43379 1518 aa27.03■■□□□ 1.92
SMAD7-201ENST00000262158 IRX6P78412 446 aaPredicted RBP27.03■■□□□ 1.92
SMAD7-201ENST00000262158 NBPF8Q3BBV2 869 aa27■■□□□ 1.91
SMAD7-201ENST00000262158 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
SMAD7-201ENST00000262158 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
SMAD7-201ENST00000262158 HNRNPUQ00839 825 aaKnown RBP eCLIP26.98■■□□□ 1.91
SMAD7-201ENST00000262158 ZNF326Q5BKZ1 582 aaKnown RBP26.98■■□□□ 1.91
SMAD7-201ENST00000262158 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms