RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
TRIP4-201ENST00000261884 CLIP1P30622 1438 aa29.96■■■□□ 2.39
TRIP4-201ENST00000261884 FBLN2P98095 1184 aa29.96■■■□□ 2.39
TRIP4-201ENST00000261884 NUP160Q12769 1436 aa29.86■■■□□ 2.37
TRIP4-201ENST00000261884 RANGAP1P46060 587 aaPredicted RBP29.86■■■□□ 2.37
TRIP4-201ENST00000261884 KIAA0586Q9BVV6 1533 aa29.85■■■□□ 2.37
TRIP4-201ENST00000261884 IQGAP2Q13576 1575 aa29.83■■■□□ 2.37
TRIP4-201ENST00000261884 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
TRIP4-201ENST00000261884 CHD1O14646 1710 aa29.82■■■□□ 2.36
TRIP4-201ENST00000261884 ARHGAP35Q9NRY4 1499 aa29.78■■■□□ 2.36
TRIP4-201ENST00000261884 EFCAB5A4FU69 1503 aa29.77■■■□□ 2.36
TRIP4-201ENST00000261884 UGGT2Q9NYU1 1516 aa29.69■■■□□ 2.34
TRIP4-201ENST00000261884 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
TRIP4-201ENST00000261884 SAMD9Q5K651 1589 aa29.68■■■□□ 2.34
TRIP4-201ENST00000261884 VPS8Q8N3P4 1428 aa29.66■■■□□ 2.34
TRIP4-201ENST00000261884 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
TRIP4-201ENST00000261884 JPH4Q96JJ6 628 aa29.59■■■□□ 2.33
TRIP4-201ENST00000261884 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
TRIP4-201ENST00000261884 P3H3Q8IVL6 736 aa29.57■■■□□ 2.32
TRIP4-201ENST00000261884 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
TRIP4-201ENST00000261884 DISP1Q96F81 1524 aa29.54■■■□□ 2.32
TRIP4-201ENST00000261884 KIAA0556O60303 1618 aa29.52■■■□□ 2.32
TRIP4-201ENST00000261884 FMN1Q68DA7 1419 aa29.51■■■□□ 2.31
TRIP4-201ENST00000261884 CARMIL2Q6F5E8 1435 aa29.51■■■□□ 2.31
TRIP4-201ENST00000261884 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
TRIP4-201ENST00000261884 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
TRIP4-201ENST00000261884 OSCARQ8IYS5 282 aa29.47■■■□□ 2.31
TRIP4-201ENST00000261884 PRG4Q92954 1404 aaPredicted RBP29.44■■■□□ 2.3
TRIP4-201ENST00000261884 CASKIN1Q8WXD9 1431 aa29.37■■■□□ 2.29
TRIP4-201ENST00000261884 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
TRIP4-201ENST00000261884 APLP2Q06481 763 aa29.35■■■□□ 2.29
TRIP4-201ENST00000261884 PCF11O94913 1555 aaKnown RBP29.35■■■□□ 2.29
TRIP4-201ENST00000261884 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
TRIP4-201ENST00000261884 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
TRIP4-201ENST00000261884 PTPRGP23470 1445 aa29.23■■■□□ 2.27
TRIP4-201ENST00000261884 TTBK1Q5TCY1 1321 aaPredicted RBP29.22■■■□□ 2.27
TRIP4-201ENST00000261884 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
TRIP4-201ENST00000261884 HECW1Q76N89 1606 aa29.21■■■□□ 2.27
TRIP4-201ENST00000261884 TIAM1Q13009 1591 aa29.18■■■□□ 2.26
TRIP4-201ENST00000261884 RAPGEF6Q8TEU7 1601 aa29.18■■■□□ 2.26
TRIP4-201ENST00000261884 PLB1Q6P1J6 1458 aa29.15■■■□□ 2.26
TRIP4-201ENST00000261884 CCDC18Q5T9S5 1454 aa29.14■■■□□ 2.26
TRIP4-201ENST00000261884 CFAP43Q8NDM7 1665 aa29.13■■■□□ 2.25
TRIP4-201ENST00000261884 ABCA8O94911 1581 aa29.12■■■□□ 2.25
TRIP4-201ENST00000261884 NUP153P49790 1475 aaKnown RBP29.1■■■□□ 2.25
TRIP4-201ENST00000261884 EPRSP07814 1512 aaKnown RBP29.1■■■□□ 2.25
TRIP4-201ENST00000261884 LRRIQ1Q96JM4 1722 aa29.07■■■□□ 2.24
TRIP4-201ENST00000261884 KANK4Q5T7N3 995 aaPredicted RBP29.06■■■□□ 2.24
TRIP4-201ENST00000261884 UACAQ9BZF9 1416 aa29.06■■■□□ 2.24
TRIP4-201ENST00000261884 LRRC9Q6ZRR7 1453 aa29.05■■■□□ 2.24
TRIP4-201ENST00000261884 ZEB1P37275 1124 aaPredicted RBP29.01■■■□□ 2.23
TRIP4-201ENST00000261884 CDK13Q14004 1512 aaKnown RBP28.99■■■□□ 2.23
TRIP4-201ENST00000261884 ABCC2Q92887 1545 aa28.98■■■□□ 2.23
TRIP4-201ENST00000261884 ARHGEF11O15085 1522 aa28.97■■■□□ 2.23
TRIP4-201ENST00000261884 MTUS2Q5JR59 1369 aa28.96■■■□□ 2.23
TRIP4-201ENST00000261884 UHRF1BP1LA0JNW5 1464 aa28.96■■■□□ 2.23
TRIP4-201ENST00000261884 ARID3CA6NKF2 412 aa28.94■■■□□ 2.22
TRIP4-201ENST00000261884 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
TRIP4-201ENST00000261884 EHBP1L1Q8N3D4 1523 aa28.93■■■□□ 2.22
TRIP4-201ENST00000261884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.91■■■□□ 2.22
TRIP4-201ENST00000261884 HNRNPUL2Q1KMD3 747 aaKnown RBP28.91■■■□□ 2.22
TRIP4-201ENST00000261884 ATP10BO94823 1461 aa28.91■■■□□ 2.22
TRIP4-201ENST00000261884 MAGI3Q5TCQ9 1506 aa28.87■■■□□ 2.21
TRIP4-201ENST00000261884 KDM5BQ9UGL1 1544 aa28.83■■■□□ 2.21
TRIP4-201ENST00000261884 RIMBP3CA6NJZ7 1639 aa28.82■■■□□ 2.2
TRIP4-201ENST00000261884 RIMBP3BA6NNM3 1639 aa28.82■■■□□ 2.2
TRIP4-201ENST00000261884 ADCY10Q96PN6 1610 aa28.82■■■□□ 2.2
TRIP4-201ENST00000261884 RIMBP3Q9UFD9 1639 aa28.82■■■□□ 2.2
TRIP4-201ENST00000261884 TROQ12816 1431 aaPredicted RBP28.8■■■□□ 2.2
TRIP4-201ENST00000261884 SUPT6HQ7KZ85 1726 aaKnown RBP28.8■■■□□ 2.2
TRIP4-201ENST00000261884 PLEKHD1A6NEE1 506 aa28.79■■■□□ 2.2
TRIP4-201ENST00000261884 NCOA2Q15596 1464 aa28.76■■■□□ 2.2
TRIP4-201ENST00000261884 ZCCHC11Q5TAX3 1644 aaKnown RBP28.75■■■□□ 2.19
TRIP4-201ENST00000261884 PHLDB1Q86UU1 1377 aa28.74■■■□□ 2.19
TRIP4-201ENST00000261884 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
TRIP4-201ENST00000261884 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
TRIP4-201ENST00000261884 KIF14Q15058 1648 aa28.65■■■□□ 2.18
TRIP4-201ENST00000261884 NPM1P06748 294 aaKnown RBP eCLIP28.65■■■□□ 2.18
TRIP4-201ENST00000261884 MYOM3Q5VTT5 1437 aa28.65■■■□□ 2.18
TRIP4-201ENST00000261884 CCNB3Q8WWL7 1395 aa28.64■■■□□ 2.17
TRIP4-201ENST00000261884 FGD6Q6ZV73 1430 aa28.6■■■□□ 2.17
TRIP4-201ENST00000261884 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
TRIP4-201ENST00000261884 ABCC10Q5T3U5 1492 aa28.55■■■□□ 2.16
TRIP4-201ENST00000261884 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
TRIP4-201ENST00000261884 ASXL2Q76L83 1435 aa28.53■■■□□ 2.16
TRIP4-201ENST00000261884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.53■■■□□ 2.16
TRIP4-201ENST00000261884 ITSN2Q9NZM3 1697 aa28.51■■■□□ 2.15
TRIP4-201ENST00000261884 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
TRIP4-201ENST00000261884 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
TRIP4-201ENST00000261884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.47■■■□□ 2.15
TRIP4-201ENST00000261884 FAM50AQ14320 339 aaKnown RBP28.46■■■□□ 2.15
TRIP4-201ENST00000261884 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
TRIP4-201ENST00000261884 MAPKBP1O60336 1514 aa28.45■■■□□ 2.15
TRIP4-201ENST00000261884 TCOF1Q13428 1488 aaKnown RBP28.44■■■□□ 2.14
TRIP4-201ENST00000261884 CFDP1Q9UEE9 299 aaPredicted RBP28.44■■■□□ 2.14
TRIP4-201ENST00000261884 TTC37Q6PGP7 1564 aa28.43■■■□□ 2.14
TRIP4-201ENST00000261884 CDC42BPAQ5VT25 1732 aa28.42■■■□□ 2.14
TRIP4-201ENST00000261884 PREX2Q70Z35 1606 aa28.38■■■□□ 2.13
TRIP4-201ENST00000261884 MYO5CQ9NQX4 1742 aa28.36■■■□□ 2.13
TRIP4-201ENST00000261884 ABCA9Q8IUA7 1624 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms