RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 FKBP8Q14318 412 aa12.58□□□□□ -0.4
PNPT1-201ENST00000260604 ANP32CO43423 234 aa12.57□□□□□ -0.4
PNPT1-201ENST00000260604 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
PNPT1-201ENST00000260604 FHOD3Q2V2M9 1422 aa12.57□□□□□ -0.4
PNPT1-201ENST00000260604 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
PNPT1-201ENST00000260604 CUX1P39880 1505 aa12.55□□□□□ -0.4
PNPT1-201ENST00000260604 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
PNPT1-201ENST00000260604 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
PNPT1-201ENST00000260604 FOXD1Q16676 465 aa12.53□□□□□ -0.4
PNPT1-201ENST00000260604 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
PNPT1-201ENST00000260604 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
PNPT1-201ENST00000260604 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
PNPT1-201ENST00000260604 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
PNPT1-201ENST00000260604 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
PNPT1-201ENST00000260604 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
PNPT1-201ENST00000260604 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
PNPT1-201ENST00000260604 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
PNPT1-201ENST00000260604 SETD5Q9C0A6 1442 aa12.48□□□□□ -0.41
PNPT1-201ENST00000260604 NESP48681 1621 aa12.47□□□□□ -0.41
PNPT1-201ENST00000260604 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
PNPT1-201ENST00000260604 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
PNPT1-201ENST00000260604 CFTRP13569 1480 aa12.46□□□□□ -0.42
PNPT1-201ENST00000260604 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
PNPT1-201ENST00000260604 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
PNPT1-201ENST00000260604 FANCD2Q9BXW9 1451 aa12.44□□□□□ -0.42
PNPT1-201ENST00000260604 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
PNPT1-201ENST00000260604 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
PNPT1-201ENST00000260604 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
PNPT1-201ENST00000260604 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
PNPT1-201ENST00000260604 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
PNPT1-201ENST00000260604 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
PNPT1-201ENST00000260604 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
PNPT1-201ENST00000260604 LRRC9Q6ZRR7 1453 aa12.35□□□□□ -0.43
PNPT1-201ENST00000260604 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
PNPT1-201ENST00000260604 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
PNPT1-201ENST00000260604 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
PNPT1-201ENST00000260604 ERICH6Q7L0X2 663 aa12.31□□□□□ -0.44
PNPT1-201ENST00000260604 HMGXB3Q12766 1538 aa12.31□□□□□ -0.44
PNPT1-201ENST00000260604 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
PNPT1-201ENST00000260604 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
PNPT1-201ENST00000260604 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
PNPT1-201ENST00000260604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.444e-6■■□□□ 11.9
PNPT1-201ENST00000260604 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
PNPT1-201ENST00000260604 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
PNPT1-201ENST00000260604 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
PNPT1-201ENST00000260604 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.44
PNPT1-201ENST00000260604 MPHOSPH9Q99550 1183 aa12.27□□□□□ -0.45
PNPT1-201ENST00000260604 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
PNPT1-201ENST00000260604 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
PNPT1-201ENST00000260604 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
PNPT1-201ENST00000260604 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
PNPT1-201ENST00000260604 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.453e-10■■■■□ 22.4
PNPT1-201ENST00000260604 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
PNPT1-201ENST00000260604 RGL3Q3MIN7 710 aa12.25□□□□□ -0.45
PNPT1-201ENST00000260604 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
PNPT1-201ENST00000260604 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
PNPT1-201ENST00000260604 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
PNPT1-201ENST00000260604 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
PNPT1-201ENST00000260604 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
PNPT1-201ENST00000260604 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
PNPT1-201ENST00000260604 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
PNPT1-201ENST00000260604 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
PNPT1-201ENST00000260604 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
PNPT1-201ENST00000260604 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
PNPT1-201ENST00000260604 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
PNPT1-201ENST00000260604 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
PNPT1-201ENST00000260604 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
PNPT1-201ENST00000260604 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
PNPT1-201ENST00000260604 PKD2Q13563 968 aa12.17□□□□□ -0.46
PNPT1-201ENST00000260604 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
PNPT1-201ENST00000260604 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
PNPT1-201ENST00000260604 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
PNPT1-201ENST00000260604 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
PNPT1-201ENST00000260604 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
PNPT1-201ENST00000260604 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.47
PNPT1-201ENST00000260604 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
PNPT1-201ENST00000260604 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
PNPT1-201ENST00000260604 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
PNPT1-201ENST00000260604 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
PNPT1-201ENST00000260604 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
PNPT1-201ENST00000260604 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
PNPT1-201ENST00000260604 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
PNPT1-201ENST00000260604 CARD11Q9BXL7 1154 aa12.12□□□□□ -0.47
PNPT1-201ENST00000260604 MYT1Q01538 1121 aa12.12□□□□□ -0.47
PNPT1-201ENST00000260604 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
PNPT1-201ENST00000260604 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
PNPT1-201ENST00000260604 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
PNPT1-201ENST00000260604 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
PNPT1-201ENST00000260604 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
PNPT1-201ENST00000260604 NAIPQ13075 1403 aa12.09□□□□□ -0.47
PNPT1-201ENST00000260604 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
PNPT1-201ENST00000260604 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
PNPT1-201ENST00000260604 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
PNPT1-201ENST00000260604 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
PNPT1-201ENST00000260604 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
PNPT1-201ENST00000260604 NUP155O75694 1391 aa12.05□□□□□ -0.48
PNPT1-201ENST00000260604 HFM1A2PYH4 1435 aa12.05□□□□□ -0.48
PNPT1-201ENST00000260604 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
PNPT1-201ENST00000260604 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
PNPT1-201ENST00000260604 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms