RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
GCM1-201ENST00000259803 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
GCM1-201ENST00000259803 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
GCM1-201ENST00000259803 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
GCM1-201ENST00000259803 THOC2Q8NI27 1593 aaKnown RBP15.61■□□□□ 0.09
GCM1-201ENST00000259803 BRD2P25440 801 aaKnown RBP15.6■□□□□ 0.09
GCM1-201ENST00000259803 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
GCM1-201ENST00000259803 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
GCM1-201ENST00000259803 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
GCM1-201ENST00000259803 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
GCM1-201ENST00000259803 KCNA4P22459 653 aa15.55■□□□□ 0.08
GCM1-201ENST00000259803 AAMPQ13685 434 aa15.54■□□□□ 0.08
GCM1-201ENST00000259803 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
GCM1-201ENST00000259803 WDR62O43379 1518 aa15.54■□□□□ 0.08
GCM1-201ENST00000259803 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
GCM1-201ENST00000259803 CUX2O14529 1486 aa15.54■□□□□ 0.08
GCM1-201ENST00000259803 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
GCM1-201ENST00000259803 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
GCM1-201ENST00000259803 SOGA1O94964 1423 aa15.53■□□□□ 0.08
GCM1-201ENST00000259803 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
GCM1-201ENST00000259803 TPRNQ4KMQ1 711 aa15.52■□□□□ 0.07
GCM1-201ENST00000259803 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
GCM1-201ENST00000259803 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
GCM1-201ENST00000259803 PCGF6Q9BYE7 350 aa15.5■□□□□ 0.07
GCM1-201ENST00000259803 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
GCM1-201ENST00000259803 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
GCM1-201ENST00000259803 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
GCM1-201ENST00000259803 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
GCM1-201ENST00000259803 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
GCM1-201ENST00000259803 GLIPR1L2Q4G1C9 344 aa15.47■□□□□ 0.07
GCM1-201ENST00000259803 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
GCM1-201ENST00000259803 BCANQ96GW7 911 aa15.42■□□□□ 0.06
GCM1-201ENST00000259803 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
GCM1-201ENST00000259803 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
GCM1-201ENST00000259803 ZNF326Q5BKZ1 582 aaKnown RBP15.39■□□□□ 0.05
GCM1-201ENST00000259803 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
GCM1-201ENST00000259803 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
GCM1-201ENST00000259803 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
GCM1-201ENST00000259803 FBLN2P98095 1184 aa15.35■□□□□ 0.05
GCM1-201ENST00000259803 ZMYND15Q9H091 742 aa15.35■□□□□ 0.05
GCM1-201ENST00000259803 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
GCM1-201ENST00000259803 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
GCM1-201ENST00000259803 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
GCM1-201ENST00000259803 DEKP35659 375 aaKnown RBP15.34■□□□□ 0.05
GCM1-201ENST00000259803 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
GCM1-201ENST00000259803 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
GCM1-201ENST00000259803 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
GCM1-201ENST00000259803 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
GCM1-201ENST00000259803 IGF1RP08069 1367 aa15.29■□□□□ 0.04
GCM1-201ENST00000259803 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
GCM1-201ENST00000259803 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
GCM1-201ENST00000259803 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
GCM1-201ENST00000259803 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
GCM1-201ENST00000259803 ABCA5Q8WWZ7 1642 aa15.24■□□□□ 0.03
GCM1-201ENST00000259803 SNAPC4Q5SXM2 1469 aa15.24■□□□□ 0.03
GCM1-201ENST00000259803 NAP1L5Q96NT1 182 aaPredicted RBP15.23■□□□□ 0.03
GCM1-201ENST00000259803 HSP90B1P14625 803 aaKnown RBP15.21■□□□□ 0.03
GCM1-201ENST00000259803 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
GCM1-201ENST00000259803 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
GCM1-201ENST00000259803 CARMIL1Q5VZK9 1371 aa15.19■□□□□ 0.02
GCM1-201ENST00000259803 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
GCM1-201ENST00000259803 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
GCM1-201ENST00000259803 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
GCM1-201ENST00000259803 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
GCM1-201ENST00000259803 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
GCM1-201ENST00000259803 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
GCM1-201ENST00000259803 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
GCM1-201ENST00000259803 TMEM132AQ24JP5 1023 aa15.11■□□□□ 0.01
GCM1-201ENST00000259803 EEA1Q15075 1411 aa15.09■□□□□ 0.01
GCM1-201ENST00000259803 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0.01
GCM1-201ENST00000259803 ADAMTS12P58397 1594 aa15.08■□□□□ 0
GCM1-201ENST00000259803 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
GCM1-201ENST00000259803 SYNJ2O15056 1496 aa15.06■□□□□ 0
GCM1-201ENST00000259803 GRIN2AQ12879 1464 aa15.05■□□□□ -0
GCM1-201ENST00000259803 P3H3Q8IVL6 736 aa15.04■□□□□ -0
GCM1-201ENST00000259803 CHD1O14646 1710 aa15.03■□□□□ -0
GCM1-201ENST00000259803 CUL7Q14999 1698 aa15□□□□□ -0.01
GCM1-201ENST00000259803 NAP1L2Q9ULW6 460 aaPredicted RBP15□□□□□ -0.01
GCM1-201ENST00000259803 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
GCM1-201ENST00000259803 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
GCM1-201ENST00000259803 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
GCM1-201ENST00000259803 KIF21BO75037 1637 aa14.96□□□□□ -0.01
GCM1-201ENST00000259803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
GCM1-201ENST00000259803 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
GCM1-201ENST00000259803 NUP160Q12769 1436 aa14.92□□□□□ -0.02
GCM1-201ENST00000259803 IRX6P78412 446 aaPredicted RBP14.9□□□□□ -0.02
GCM1-201ENST00000259803 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
GCM1-201ENST00000259803 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
GCM1-201ENST00000259803 IL27Q8NEV9 243 aa14.88□□□□□ -0.03
GCM1-201ENST00000259803 IPO4Q8TEX9 1081 aaKnown RBP14.88□□□□□ -0.03
GCM1-201ENST00000259803 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
GCM1-201ENST00000259803 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
GCM1-201ENST00000259803 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
GCM1-201ENST00000259803 SUPT16HQ9Y5B9 1047 aaKnown RBP14.87□□□□□ -0.03
GCM1-201ENST00000259803 CEP162Q5TB80 1403 aa14.87□□□□□ -0.03
GCM1-201ENST00000259803 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
GCM1-201ENST00000259803 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
GCM1-201ENST00000259803 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
GCM1-201ENST00000259803 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
GCM1-201ENST00000259803 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms