RNA–Protein interactions for RNA: ENST00000252725.9

ARPC1B-201, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1B, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-201ENST00000252725 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
ARPC1B-201ENST00000252725 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
ARPC1B-201ENST00000252725 SHROOM2Q13796 1616 aa29.61■■■□□ 2.33
ARPC1B-201ENST00000252725 IQGAP2Q13576 1575 aa29.61■■■□□ 2.33
ARPC1B-201ENST00000252725 JPH4Q96JJ6 628 aa29.59■■■□□ 2.33
ARPC1B-201ENST00000252725 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
ARPC1B-201ENST00000252725 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
ARPC1B-201ENST00000252725 ARHGEF11O15085 1522 aa29.5■■■□□ 2.31
ARPC1B-201ENST00000252725 UGGT2Q9NYU1 1516 aa29.49■■■□□ 2.31
ARPC1B-201ENST00000252725 PRG4Q92954 1404 aaPredicted RBP29.48■■■□□ 2.31
ARPC1B-201ENST00000252725 ERCC6L2Q5T890 1561 aa29.44■■■□□ 2.3
ARPC1B-201ENST00000252725 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
ARPC1B-201ENST00000252725 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
ARPC1B-201ENST00000252725 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
ARPC1B-201ENST00000252725 TNIKQ9UKE5 1360 aa29.41■■■□□ 2.3
ARPC1B-201ENST00000252725 LOC105371045A0A1W2PR82 267 aa29.41■■■□□ 2.3
ARPC1B-201ENST00000252725 DISP1Q96F81 1524 aa29.39■■■□□ 2.3
ARPC1B-201ENST00000252725 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
ARPC1B-201ENST00000252725 KIAA0556O60303 1618 aa29.33■■■□□ 2.29
ARPC1B-201ENST00000252725 SAMD9Q5K651 1589 aa29.31■■■□□ 2.28
ARPC1B-201ENST00000252725 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
ARPC1B-201ENST00000252725 RANGAP1P46060 587 aaPredicted RBP29.28■■■□□ 2.28
ARPC1B-201ENST00000252725 EFCAB5A4FU69 1503 aa29.26■■■□□ 2.27
ARPC1B-201ENST00000252725 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
ARPC1B-201ENST00000252725 PTPRGP23470 1445 aa29.19■■■□□ 2.26
ARPC1B-201ENST00000252725 CYB5RLQ6IPT4 315 aa29.18■■■□□ 2.26
ARPC1B-201ENST00000252725 P3H3Q8IVL6 736 aa29.18■■■□□ 2.26
ARPC1B-201ENST00000252725 CLIP1P30622 1438 aa29.15■■■□□ 2.26
ARPC1B-201ENST00000252725 CEP162Q5TB80 1403 aa29.15■■■□□ 2.26
ARPC1B-201ENST00000252725 FHOD3Q2V2M9 1422 aa29.13■■■□□ 2.25
ARPC1B-201ENST00000252725 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
ARPC1B-201ENST00000252725 UACAQ9BZF9 1416 aa29.02■■■□□ 2.24
ARPC1B-201ENST00000252725 PLB1Q6P1J6 1458 aa29■■■□□ 2.23
ARPC1B-201ENST00000252725 ABCA8O94911 1581 aa28.99■■■□□ 2.23
ARPC1B-201ENST00000252725 UHRF1BP1LA0JNW5 1464 aa28.98■■■□□ 2.23
ARPC1B-201ENST00000252725 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
ARPC1B-201ENST00000252725 FMN1Q68DA7 1419 aa28.97■■■□□ 2.23
ARPC1B-201ENST00000252725 ABCC2Q92887 1545 aa28.96■■■□□ 2.23
ARPC1B-201ENST00000252725 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
ARPC1B-201ENST00000252725 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
ARPC1B-201ENST00000252725 NUP153P49790 1475 aaKnown RBP28.83■■■□□ 2.21
ARPC1B-201ENST00000252725 CASKIN1Q8WXD9 1431 aa28.81■■■□□ 2.2
ARPC1B-201ENST00000252725 PCF11O94913 1555 aaKnown RBP28.8■■■□□ 2.2
ARPC1B-201ENST00000252725 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
ARPC1B-201ENST00000252725 HECW1Q76N89 1606 aa28.77■■■□□ 2.2
ARPC1B-201ENST00000252725 VPS8Q8N3P4 1428 aa28.77■■■□□ 2.2
ARPC1B-201ENST00000252725 FYCO1Q9BQS8 1478 aa28.77■■■□□ 2.2
ARPC1B-201ENST00000252725 ZCCHC11Q5TAX3 1644 aaKnown RBP28.76■■■□□ 2.19
ARPC1B-201ENST00000252725 ATP10BO94823 1461 aa28.76■■■□□ 2.19
ARPC1B-201ENST00000252725 ATP1B4Q9UN42 357 aaPredicted RBP28.71■■■□□ 2.19
ARPC1B-201ENST00000252725 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
ARPC1B-201ENST00000252725 MAPKBP1O60336 1514 aa28.7■■■□□ 2.19
ARPC1B-201ENST00000252725 EPRSP07814 1512 aaKnown RBP28.7■■■□□ 2.19
ARPC1B-201ENST00000252725 LRRIQ1Q96JM4 1722 aa28.66■■■□□ 2.18
ARPC1B-201ENST00000252725 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
ARPC1B-201ENST00000252725 ASXL2Q76L83 1435 aa28.64■■■□□ 2.18
ARPC1B-201ENST00000252725 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
ARPC1B-201ENST00000252725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
ARPC1B-201ENST00000252725 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
ARPC1B-201ENST00000252725 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
ARPC1B-201ENST00000252725 PLEKHD1A6NEE1 506 aa28.53■■■□□ 2.16
ARPC1B-201ENST00000252725 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
ARPC1B-201ENST00000252725 ABCC10Q5T3U5 1492 aa28.52■■■□□ 2.16
ARPC1B-201ENST00000252725 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
ARPC1B-201ENST00000252725 DIP2BQ9P265 1576 aa28.47■■■□□ 2.15
ARPC1B-201ENST00000252725 CFAP43Q8NDM7 1665 aa28.47■■■□□ 2.15
ARPC1B-201ENST00000252725 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
ARPC1B-201ENST00000252725 MAGI3Q5TCQ9 1506 aa28.46■■■□□ 2.15
ARPC1B-201ENST00000252725 TROQ12816 1431 aaPredicted RBP28.45■■■□□ 2.15
ARPC1B-201ENST00000252725 KCNH8Q96L42 1107 aa28.44■■■□□ 2.14
ARPC1B-201ENST00000252725 GLI2P10070 1586 aa28.43■■■□□ 2.14
ARPC1B-201ENST00000252725 FAM69CQ0P6D2 419 aa28.41■■■□□ 2.14
ARPC1B-201ENST00000252725 KIF13AQ9H1H9 1805 aa28.41■■■□□ 2.14
ARPC1B-201ENST00000252725 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
ARPC1B-201ENST00000252725 APLP2Q06481 763 aa28.38■■■□□ 2.13
ARPC1B-201ENST00000252725 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
ARPC1B-201ENST00000252725 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
ARPC1B-201ENST00000252725 EHBP1L1Q8N3D4 1523 aa28.35■■■□□ 2.13
ARPC1B-201ENST00000252725 ABCA9Q8IUA7 1624 aa28.33■■■□□ 2.13
ARPC1B-201ENST00000252725 KIF14Q15058 1648 aa28.33■■■□□ 2.13
ARPC1B-201ENST00000252725 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.12
ARPC1B-201ENST00000252725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.32■■■□□ 2.128e-7■■■■□ 23.6
ARPC1B-201ENST00000252725 MAP3K4Q9Y6R4 1608 aa28.3■■■□□ 2.12
ARPC1B-201ENST00000252725 TTC37Q6PGP7 1564 aa28.27■■■□□ 2.12
ARPC1B-201ENST00000252725 CD109Q6YHK3 1445 aa28.26■■■□□ 2.11
ARPC1B-201ENST00000252725 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
ARPC1B-201ENST00000252725 PPRC1Q5VV67 1664 aaKnown RBP28.19■■■□□ 2.1
ARPC1B-201ENST00000252725 NCOA2Q15596 1464 aa28.19■■■□□ 2.1
ARPC1B-201ENST00000252725 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
ARPC1B-201ENST00000252725 PLCH2O75038 1416 aa28.16■■■□□ 2.1
ARPC1B-201ENST00000252725 MYO5CQ9NQX4 1742 aa28.15■■■□□ 2.1
ARPC1B-201ENST00000252725 ARAP3Q8WWN8 1544 aa28.14■■■□□ 2.09
ARPC1B-201ENST00000252725 GPATCH8Q9UKJ3 1502 aaKnown RBP28.13■■■□□ 2.09
ARPC1B-201ENST00000252725 CCNB3Q8WWL7 1395 aa28.13■■■□□ 2.09
ARPC1B-201ENST00000252725 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
ARPC1B-201ENST00000252725 CDC42BPAQ5VT25 1732 aa28.11■■■□□ 2.09
ARPC1B-201ENST00000252725 PREX2Q70Z35 1606 aa28.11■■■□□ 2.09
ARPC1B-201ENST00000252725 CDC42BPBQ9Y5S2 1711 aa28.08■■■□□ 2.09
ARPC1B-201ENST00000252725 FANCAO15360 1455 aa28.06■■■□□ 2.08
ARPC1B-201ENST00000252725 PPARGC1BQ86YN6 1023 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms