RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
LSM8-201ENST00000249299 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
LSM8-201ENST00000249299 SYNJ2O15056 1496 aa20.89■□□□□ 0.93
LSM8-201ENST00000249299 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
LSM8-201ENST00000249299 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
LSM8-201ENST00000249299 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
LSM8-201ENST00000249299 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
LSM8-201ENST00000249299 NUP160Q12769 1436 aa20.72■□□□□ 0.91
LSM8-201ENST00000249299 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
LSM8-201ENST00000249299 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
LSM8-201ENST00000249299 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
LSM8-201ENST00000249299 FBLN2P98095 1184 aa20.68■□□□□ 0.9
LSM8-201ENST00000249299 CLIP1P30622 1438 aa20.65■□□□□ 0.9
LSM8-201ENST00000249299 CTTNBP2Q8WZ74 1663 aa20.63■□□□□ 0.89
LSM8-201ENST00000249299 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
LSM8-201ENST00000249299 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
LSM8-201ENST00000249299 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
LSM8-201ENST00000249299 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
LSM8-201ENST00000249299 CHD1O14646 1710 aa20.56■□□□□ 0.88
LSM8-201ENST00000249299 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
LSM8-201ENST00000249299 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
LSM8-201ENST00000249299 OSCARQ8IYS5 282 aa20.52■□□□□ 0.87
LSM8-201ENST00000249299 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
LSM8-201ENST00000249299 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
LSM8-201ENST00000249299 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
LSM8-201ENST00000249299 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
LSM8-201ENST00000249299 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
LSM8-201ENST00000249299 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
LSM8-201ENST00000249299 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
LSM8-201ENST00000249299 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
LSM8-201ENST00000249299 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
LSM8-201ENST00000249299 FMN1Q68DA7 1419 aa20.42■□□□□ 0.86
LSM8-201ENST00000249299 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
LSM8-201ENST00000249299 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
LSM8-201ENST00000249299 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
LSM8-201ENST00000249299 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
LSM8-201ENST00000249299 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
LSM8-201ENST00000249299 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
LSM8-201ENST00000249299 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
LSM8-201ENST00000249299 KCNA4P22459 653 aa20.28■□□□□ 0.84
LSM8-201ENST00000249299 PTPRGP23470 1445 aa20.26■□□□□ 0.83
LSM8-201ENST00000249299 MAP3K1Q13233 1512 aa20.26■□□□□ 0.83
LSM8-201ENST00000249299 APLP2Q06481 763 aa20.25■□□□□ 0.83
LSM8-201ENST00000249299 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
LSM8-201ENST00000249299 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
LSM8-201ENST00000249299 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
LSM8-201ENST00000249299 ABCA8O94911 1581 aa20.15■□□□□ 0.82
LSM8-201ENST00000249299 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
LSM8-201ENST00000249299 UACAQ9BZF9 1416 aa20.15■□□□□ 0.82
LSM8-201ENST00000249299 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
LSM8-201ENST00000249299 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
LSM8-201ENST00000249299 PLB1Q6P1J6 1458 aa20.12■□□□□ 0.81
LSM8-201ENST00000249299 NUP153P49790 1475 aaKnown RBP20.1■□□□□ 0.81
LSM8-201ENST00000249299 EPRSP07814 1512 aaKnown RBP20.1■□□□□ 0.81
LSM8-201ENST00000249299 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
LSM8-201ENST00000249299 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
LSM8-201ENST00000249299 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.81
LSM8-201ENST00000249299 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
LSM8-201ENST00000249299 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
LSM8-201ENST00000249299 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
LSM8-201ENST00000249299 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
LSM8-201ENST00000249299 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
LSM8-201ENST00000249299 LRRC9Q6ZRR7 1453 aa20.04■□□□□ 0.8
LSM8-201ENST00000249299 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
LSM8-201ENST00000249299 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.79
LSM8-201ENST00000249299 ATP10BO94823 1461 aa20.01■□□□□ 0.79
LSM8-201ENST00000249299 KDM5BQ9UGL1 1544 aa20■□□□□ 0.79
LSM8-201ENST00000249299 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
LSM8-201ENST00000249299 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
LSM8-201ENST00000249299 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
LSM8-201ENST00000249299 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
LSM8-201ENST00000249299 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
LSM8-201ENST00000249299 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
LSM8-201ENST00000249299 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
LSM8-201ENST00000249299 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
LSM8-201ENST00000249299 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
LSM8-201ENST00000249299 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
LSM8-201ENST00000249299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
LSM8-201ENST00000249299 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
LSM8-201ENST00000249299 ADCY10Q96PN6 1610 aa19.92■□□□□ 0.78
LSM8-201ENST00000249299 NPM1P06748 294 aaKnown RBP eCLIP19.9■□□□□ 0.78
LSM8-201ENST00000249299 NPM3O75607 178 aaKnown RBP19.89■□□□□ 0.77
LSM8-201ENST00000249299 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
LSM8-201ENST00000249299 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
LSM8-201ENST00000249299 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
LSM8-201ENST00000249299 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
LSM8-201ENST00000249299 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
LSM8-201ENST00000249299 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
LSM8-201ENST00000249299 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
LSM8-201ENST00000249299 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
LSM8-201ENST00000249299 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
LSM8-201ENST00000249299 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
LSM8-201ENST00000249299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.79■□□□□ 0.76
LSM8-201ENST00000249299 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
LSM8-201ENST00000249299 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
LSM8-201ENST00000249299 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
LSM8-201ENST00000249299 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
LSM8-201ENST00000249299 KIF14Q15058 1648 aa19.77■□□□□ 0.76
LSM8-201ENST00000249299 ASXL2Q76L83 1435 aa19.76■□□□□ 0.75
LSM8-201ENST00000249299 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms