RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
ATP6V1F-201ENST00000249289 CTTNBP2Q8WZ74 1663 aa25.02■■□□□ 1.6
ATP6V1F-201ENST00000249289 IQGAP2Q13576 1575 aa25■■□□□ 1.59
ATP6V1F-201ENST00000249289 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
ATP6V1F-201ENST00000249289 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
ATP6V1F-201ENST00000249289 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
ATP6V1F-201ENST00000249289 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
ATP6V1F-201ENST00000249289 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
ATP6V1F-201ENST00000249289 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
ATP6V1F-201ENST00000249289 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
ATP6V1F-201ENST00000249289 UGGT2Q9NYU1 1516 aa24.86■■□□□ 1.57
ATP6V1F-201ENST00000249289 ERCC6L2Q5T890 1561 aa24.84■■□□□ 1.57
ATP6V1F-201ENST00000249289 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
ATP6V1F-201ENST00000249289 CARMIL2Q6F5E8 1435 aa24.78■■□□□ 1.56
ATP6V1F-201ENST00000249289 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
ATP6V1F-201ENST00000249289 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
ATP6V1F-201ENST00000249289 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
ATP6V1F-201ENST00000249289 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
ATP6V1F-201ENST00000249289 SAMD9Q5K651 1589 aa24.7■■□□□ 1.54
ATP6V1F-201ENST00000249289 EFCAB5A4FU69 1503 aa24.68■■□□□ 1.54
ATP6V1F-201ENST00000249289 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
ATP6V1F-201ENST00000249289 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
ATP6V1F-201ENST00000249289 PTPRGP23470 1445 aa24.61■■□□□ 1.53
ATP6V1F-201ENST00000249289 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
ATP6V1F-201ENST00000249289 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
ATP6V1F-201ENST00000249289 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
ATP6V1F-201ENST00000249289 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
ATP6V1F-201ENST00000249289 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
ATP6V1F-201ENST00000249289 CLIP1P30622 1438 aa24.51■■□□□ 1.51
ATP6V1F-201ENST00000249289 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
ATP6V1F-201ENST00000249289 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
ATP6V1F-201ENST00000249289 ADCY10Q96PN6 1610 aa24.47■■□□□ 1.51
ATP6V1F-201ENST00000249289 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
ATP6V1F-201ENST00000249289 ABCC2Q92887 1545 aa24.45■■□□□ 1.51
ATP6V1F-201ENST00000249289 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.51
ATP6V1F-201ENST00000249289 ABCA8O94911 1581 aa24.45■■□□□ 1.5
ATP6V1F-201ENST00000249289 PLB1Q6P1J6 1458 aa24.43■■□□□ 1.5
ATP6V1F-201ENST00000249289 FMN1Q68DA7 1419 aa24.41■■□□□ 1.5
ATP6V1F-201ENST00000249289 RAPGEF6Q8TEU7 1601 aa24.39■■□□□ 1.5
ATP6V1F-201ENST00000249289 KDM5BQ9UGL1 1544 aa24.33■■□□□ 1.49
ATP6V1F-201ENST00000249289 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
ATP6V1F-201ENST00000249289 ZCCHC11Q5TAX3 1644 aaKnown RBP24.29■■□□□ 1.48
ATP6V1F-201ENST00000249289 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
ATP6V1F-201ENST00000249289 NUP153P49790 1475 aaKnown RBP24.28■■□□□ 1.48
ATP6V1F-201ENST00000249289 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
ATP6V1F-201ENST00000249289 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
ATP6V1F-201ENST00000249289 CASKIN1Q8WXD9 1431 aa24.24■■□□□ 1.47
ATP6V1F-201ENST00000249289 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
ATP6V1F-201ENST00000249289 ATP10BO94823 1461 aa24.2■■□□□ 1.47
ATP6V1F-201ENST00000249289 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
ATP6V1F-201ENST00000249289 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
ATP6V1F-201ENST00000249289 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
ATP6V1F-201ENST00000249289 CCDC18Q5T9S5 1454 aa24.14■■□□□ 1.46
ATP6V1F-201ENST00000249289 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
ATP6V1F-201ENST00000249289 CDK13Q14004 1512 aaKnown RBP24.14■■□□□ 1.45
ATP6V1F-201ENST00000249289 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
ATP6V1F-201ENST00000249289 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
ATP6V1F-201ENST00000249289 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
ATP6V1F-201ENST00000249289 DIP2BQ9P265 1576 aa24.09■■□□□ 1.45
ATP6V1F-201ENST00000249289 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
ATP6V1F-201ENST00000249289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.09■■□□□ 1.45
ATP6V1F-201ENST00000249289 HNRNPUL2Q1KMD3 747 aaKnown RBP24.09■■□□□ 1.45
ATP6V1F-201ENST00000249289 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
ATP6V1F-201ENST00000249289 GLI2P10070 1586 aa24.03■■□□□ 1.44
ATP6V1F-201ENST00000249289 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
ATP6V1F-201ENST00000249289 CDK11AQ9UQ88 783 aaPredicted RBP24.01■■□□□ 1.43
ATP6V1F-201ENST00000249289 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
ATP6V1F-201ENST00000249289 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
ATP6V1F-201ENST00000249289 TROQ12816 1431 aaPredicted RBP23.97■■□□□ 1.43
ATP6V1F-201ENST00000249289 TIAM1Q13009 1591 aa23.96■■□□□ 1.43
ATP6V1F-201ENST00000249289 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
ATP6V1F-201ENST00000249289 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
ATP6V1F-201ENST00000249289 ABCA9Q8IUA7 1624 aa23.93■■□□□ 1.42
ATP6V1F-201ENST00000249289 MAP3K4Q9Y6R4 1608 aa23.93■■□□□ 1.42
ATP6V1F-201ENST00000249289 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
ATP6V1F-201ENST00000249289 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
ATP6V1F-201ENST00000249289 KIF14Q15058 1648 aa23.92■■□□□ 1.42
ATP6V1F-201ENST00000249289 EHBP1L1Q8N3D4 1523 aa23.9■■□□□ 1.42
ATP6V1F-201ENST00000249289 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
ATP6V1F-201ENST00000249289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.417e-14■■■□□ 15.5
ATP6V1F-201ENST00000249289 TTC37Q6PGP7 1564 aa23.86■■□□□ 1.41
ATP6V1F-201ENST00000249289 APLP2Q06481 763 aa23.85■■□□□ 1.41
ATP6V1F-201ENST00000249289 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
ATP6V1F-201ENST00000249289 LRRC9Q6ZRR7 1453 aa23.82■■□□□ 1.4
ATP6V1F-201ENST00000249289 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
ATP6V1F-201ENST00000249289 PPRC1Q5VV67 1664 aaKnown RBP23.82■■□□□ 1.4
ATP6V1F-201ENST00000249289 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
ATP6V1F-201ENST00000249289 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
ATP6V1F-201ENST00000249289 MYO5CQ9NQX4 1742 aa23.78■■□□□ 1.4
ATP6V1F-201ENST00000249289 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
ATP6V1F-201ENST00000249289 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
ATP6V1F-201ENST00000249289 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
ATP6V1F-201ENST00000249289 PLCH2O75038 1416 aa23.72■■□□□ 1.39
ATP6V1F-201ENST00000249289 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
ATP6V1F-201ENST00000249289 CFAP74Q9C0B2 1584 aa23.72■■□□□ 1.39
ATP6V1F-201ENST00000249289 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.39
ATP6V1F-201ENST00000249289 NEO1Q92859 1461 aa23.69■■□□□ 1.38
ATP6V1F-201ENST00000249289 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
ATP6V1F-201ENST00000249289 FANCAO15360 1455 aa23.68■■□□□ 1.38
ATP6V1F-201ENST00000249289 CCNB3Q8WWL7 1395 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms