RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CTTNBP2Q8WZ74 1663 aa28.98■■■□□ 2.23
CDC42EP1-201ENST00000249014 LRRC9Q6ZRR7 1453 aa28.97■■■□□ 2.23
CDC42EP1-201ENST00000249014 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
CDC42EP1-201ENST00000249014 CLSPNQ9HAW4 1339 aa28.96■■■□□ 2.23
CDC42EP1-201ENST00000249014 CFAP43Q8NDM7 1665 aa28.95■■■□□ 2.23
CDC42EP1-201ENST00000249014 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
CDC42EP1-201ENST00000249014 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
CDC42EP1-201ENST00000249014 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
CDC42EP1-201ENST00000249014 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
CDC42EP1-201ENST00000249014 EFCAB5A4FU69 1503 aa28.92■■■□□ 2.22
CDC42EP1-201ENST00000249014 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
CDC42EP1-201ENST00000249014 TDRD9Q8NDG6 1382 aaKnown RBP28.87■■■□□ 2.21
CDC42EP1-201ENST00000249014 ITGAEP38570 1179 aa28.86■■■□□ 2.21
CDC42EP1-201ENST00000249014 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
CDC42EP1-201ENST00000249014 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
CDC42EP1-201ENST00000249014 FYCO1Q9BQS8 1478 aa28.83■■■□□ 2.21
CDC42EP1-201ENST00000249014 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
CDC42EP1-201ENST00000249014 ACIN1Q9UKV3 1341 aaKnown RBP28.79■■■□□ 2.2
CDC42EP1-201ENST00000249014 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.24e-7■■■■□ 23.9
CDC42EP1-201ENST00000249014 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
CDC42EP1-201ENST00000249014 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
CDC42EP1-201ENST00000249014 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
CDC42EP1-201ENST00000249014 RAB3GAP2Q9H2M9 1393 aa28.74■■■□□ 2.19
CDC42EP1-201ENST00000249014 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
CDC42EP1-201ENST00000249014 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.19
CDC42EP1-201ENST00000249014 FMN1Q68DA7 1419 aa28.7■■■□□ 2.19
CDC42EP1-201ENST00000249014 MIER1Q8N108 512 aa28.66■■■□□ 2.18
CDC42EP1-201ENST00000249014 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
CDC42EP1-201ENST00000249014 SETD5Q9C0A6 1442 aa28.65■■■□□ 2.18
CDC42EP1-201ENST00000249014 CENPBP07199 599 aaPredicted RBP28.65■■■□□ 2.18
CDC42EP1-201ENST00000249014 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
CDC42EP1-201ENST00000249014 LRRIQ1Q96JM4 1722 aa28.63■■■□□ 2.17
CDC42EP1-201ENST00000249014 PBRM1Q86U86 1689 aa28.6■■■□□ 2.17
CDC42EP1-201ENST00000249014 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
CDC42EP1-201ENST00000249014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.53■■■□□ 2.165e-8■■■■■ 36.2
CDC42EP1-201ENST00000249014 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
CDC42EP1-201ENST00000249014 FGD6Q6ZV73 1430 aa28.49■■■□□ 2.15
CDC42EP1-201ENST00000249014 MTUS2Q5JR59 1369 aa28.49■■■□□ 2.15
CDC42EP1-201ENST00000249014 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
CDC42EP1-201ENST00000249014 ADAMTS12P58397 1594 aa28.47■■■□□ 2.15
CDC42EP1-201ENST00000249014 YTHDC1Q96MU7 727 aaKnown RBP28.45■■■□□ 2.15
CDC42EP1-201ENST00000249014 GTF3C3Q9Y5Q9 886 aa28.42■■■□□ 2.14
CDC42EP1-201ENST00000249014 IQGAP2Q13576 1575 aa28.41■■■□□ 2.14
CDC42EP1-201ENST00000249014 NCOA2Q15596 1464 aa28.4■■■□□ 2.14
CDC42EP1-201ENST00000249014 SUPT6HQ7KZ85 1726 aaKnown RBP28.38■■■□□ 2.13
CDC42EP1-201ENST00000249014 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
CDC42EP1-201ENST00000249014 MAGI3Q5TCQ9 1506 aa28.35■■■□□ 2.13
CDC42EP1-201ENST00000249014 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
CDC42EP1-201ENST00000249014 SIN3AQ96ST3 1273 aa28.34■■■□□ 2.13
CDC42EP1-201ENST00000249014 PTPRKQ15262 1439 aa28.34■■■□□ 2.13
CDC42EP1-201ENST00000249014 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
CDC42EP1-201ENST00000249014 WDR62O43379 1518 aa28.32■■■□□ 2.12
CDC42EP1-201ENST00000249014 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
CDC42EP1-201ENST00000249014 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
CDC42EP1-201ENST00000249014 UGGT2Q9NYU1 1516 aa28.3■■■□□ 2.12
CDC42EP1-201ENST00000249014 HECW1Q76N89 1606 aa28.3■■■□□ 2.12
CDC42EP1-201ENST00000249014 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
CDC42EP1-201ENST00000249014 HFM1A2PYH4 1435 aa28.26■■■□□ 2.11
CDC42EP1-201ENST00000249014 PTPN23Q9H3S7 1636 aa28.25■■■□□ 2.11
CDC42EP1-201ENST00000249014 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
CDC42EP1-201ENST00000249014 CDK13Q14004 1512 aaKnown RBP28.19■■■□□ 2.1
CDC42EP1-201ENST00000249014 NAIPQ13075 1403 aa28.18■■■□□ 2.1
CDC42EP1-201ENST00000249014 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
CDC42EP1-201ENST00000249014 TIMELESSQ9UNS1 1208 aa28.17■■■□□ 2.1
CDC42EP1-201ENST00000249014 UACAQ9BZF9 1416 aa28.15■■■□□ 2.1
CDC42EP1-201ENST00000249014 TCOF1Q13428 1488 aaKnown RBP28.14■■■□□ 2.1
CDC42EP1-201ENST00000249014 KIAA0586Q9BVV6 1533 aa28.13■■■□□ 2.09
CDC42EP1-201ENST00000249014 DISP1Q96F81 1524 aa28.11■■■□□ 2.09
CDC42EP1-201ENST00000249014 KIAA0556O60303 1618 aa28.11■■■□□ 2.09
CDC42EP1-201ENST00000249014 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
CDC42EP1-201ENST00000249014 ARID3CA6NKF2 412 aa28.09■■■□□ 2.09
CDC42EP1-201ENST00000249014 PPP1R15AO75807 674 aaPredicted RBP28.08■■■□□ 2.09
CDC42EP1-201ENST00000249014 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
CDC42EP1-201ENST00000249014 GCC2Q8IWJ2 1684 aa28.04■■■□□ 2.08
CDC42EP1-201ENST00000249014 MIA2Q96PC5 1412 aa28.02■■■□□ 2.08
CDC42EP1-201ENST00000249014 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
CDC42EP1-201ENST00000249014 CHIC2Q9UKJ5 165 aa28■■■□□ 2.07
CDC42EP1-201ENST00000249014 NUP153P49790 1475 aaKnown RBP27.99■■■□□ 2.07
CDC42EP1-201ENST00000249014 RAPGEF6Q8TEU7 1601 aa27.98■■■□□ 2.07
CDC42EP1-201ENST00000249014 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
CDC42EP1-201ENST00000249014 MAGI1Q96QZ7 1491 aaPredicted RBP27.97■■■□□ 2.07
CDC42EP1-201ENST00000249014 KDM6BO15054 1643 aa27.96■■■□□ 2.07
CDC42EP1-201ENST00000249014 AKNAQ7Z591 1439 aa27.95■■■□□ 2.06
CDC42EP1-201ENST00000249014 CEP170Q5SW79 1584 aa27.95■■■□□ 2.06
CDC42EP1-201ENST00000249014 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
CDC42EP1-201ENST00000249014 DENND4BO75064 1496 aaPredicted RBP27.91■■■□□ 2.06
CDC42EP1-201ENST00000249014 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
CDC42EP1-201ENST00000249014 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
CDC42EP1-201ENST00000249014 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.05
CDC42EP1-201ENST00000249014 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
CDC42EP1-201ENST00000249014 KDM5BQ9UGL1 1544 aa27.88■■■□□ 2.05
CDC42EP1-201ENST00000249014 KCNH8Q96L42 1107 aa27.85■■■□□ 2.05
CDC42EP1-201ENST00000249014 DAPK1P53355 1430 aa27.82■■■□□ 2.04
CDC42EP1-201ENST00000249014 DNMT1P26358 1616 aaKnown RBP27.82■■■□□ 2.04
CDC42EP1-201ENST00000249014 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
CDC42EP1-201ENST00000249014 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
CDC42EP1-201ENST00000249014 FBLN2P98095 1184 aa27.8■■■□□ 2.04
CDC42EP1-201ENST00000249014 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
CDC42EP1-201ENST00000249014 ABCC5O15440 1437 aa27.79■■■□□ 2.04
CDC42EP1-201ENST00000249014 CDK11AQ9UQ88 783 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms