RNA–Protein interactions for RNA: ENST00000244546.4

PEX6-201, Transcript of peroxisomal biogenesis factor 6, humanhuman

TSL 1 (best) BASIC

Gene PEX6, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-201ENST00000244546 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
PEX6-201ENST00000244546 HNRNPUL2Q1KMD3 747 aaKnown RBP29.61■■■□□ 2.33
PEX6-201ENST00000244546 ERICH3Q5RHP9 1530 aa29.6■■■□□ 2.33
PEX6-201ENST00000244546 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
PEX6-201ENST00000244546 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
PEX6-201ENST00000244546 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
PEX6-201ENST00000244546 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
PEX6-201ENST00000244546 CLSPNQ9HAW4 1339 aa29.49■■■□□ 2.31
PEX6-201ENST00000244546 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.31
PEX6-201ENST00000244546 ARHGAP35Q9NRY4 1499 aa29.44■■■□□ 2.3
PEX6-201ENST00000244546 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.291e-6■■■■□ 22.4
PEX6-201ENST00000244546 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
PEX6-201ENST00000244546 ITGAEP38570 1179 aa29.28■■■□□ 2.28
PEX6-201ENST00000244546 FHOD3Q2V2M9 1422 aa29.25■■■□□ 2.27
PEX6-201ENST00000244546 BCANQ96GW7 911 aa29.24■■■□□ 2.27
PEX6-201ENST00000244546 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
PEX6-201ENST00000244546 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
PEX6-201ENST00000244546 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
PEX6-201ENST00000244546 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
PEX6-201ENST00000244546 ARID3CA6NKF2 412 aa29.12■■■□□ 2.25
PEX6-201ENST00000244546 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
PEX6-201ENST00000244546 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
PEX6-201ENST00000244546 FBLN2P98095 1184 aa29.07■■■□□ 2.24
PEX6-201ENST00000244546 CUL7Q14999 1698 aa29.04■■■□□ 2.24
PEX6-201ENST00000244546 KCNH8Q96L42 1107 aa29.02■■■□□ 2.24
PEX6-201ENST00000244546 RBM19Q9Y4C8 960 aaKnown RBP29.01■■■□□ 2.23
PEX6-201ENST00000244546 FKBP8Q14318 412 aa28.98■■■□□ 2.23
PEX6-201ENST00000244546 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
PEX6-201ENST00000244546 FAM50AQ14320 339 aaKnown RBP28.93■■■□□ 2.22
PEX6-201ENST00000244546 PRKCSHP14314 528 aaPredicted RBP28.9■■■□□ 2.22
PEX6-201ENST00000244546 CTTNBP2Q8WZ74 1663 aa28.9■■■□□ 2.22
PEX6-201ENST00000244546 WDR62O43379 1518 aa28.88■■■□□ 2.21
PEX6-201ENST00000244546 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
PEX6-201ENST00000244546 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
PEX6-201ENST00000244546 TIAM1Q13009 1591 aa28.86■■■□□ 2.21
PEX6-201ENST00000244546 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
PEX6-201ENST00000244546 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
PEX6-201ENST00000244546 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
PEX6-201ENST00000244546 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
PEX6-201ENST00000244546 MSH5O43196 834 aa28.83■■■□□ 2.21
PEX6-201ENST00000244546 LRRC9Q6ZRR7 1453 aa28.82■■■□□ 2.2
PEX6-201ENST00000244546 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
PEX6-201ENST00000244546 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
PEX6-201ENST00000244546 DHX57Q6P158 1386 aaKnown RBP28.79■■■□□ 2.2
PEX6-201ENST00000244546 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
PEX6-201ENST00000244546 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
PEX6-201ENST00000244546 RRBP1Q9P2E9 1410 aaKnown RBP28.74■■■□□ 2.19
PEX6-201ENST00000244546 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
PEX6-201ENST00000244546 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
PEX6-201ENST00000244546 CASKIN1Q8WXD9 1431 aa28.73■■■□□ 2.19
PEX6-201ENST00000244546 FMN1Q68DA7 1419 aa28.72■■■□□ 2.19
PEX6-201ENST00000244546 MTUS2Q5JR59 1369 aa28.69■■■□□ 2.18
PEX6-201ENST00000244546 FYCO1Q9BQS8 1478 aa28.67■■■□□ 2.18
PEX6-201ENST00000244546 IQGAP2Q13576 1575 aa28.64■■■□□ 2.17
PEX6-201ENST00000244546 SAMD9Q5K651 1589 aa28.63■■■□□ 2.17
PEX6-201ENST00000244546 NEFLP07196 543 aa28.62■■■□□ 2.17
PEX6-201ENST00000244546 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
PEX6-201ENST00000244546 CFAP43Q8NDM7 1665 aa28.56■■■□□ 2.16
PEX6-201ENST00000244546 LRRIQ1Q96JM4 1722 aa28.56■■■□□ 2.16
PEX6-201ENST00000244546 MAP3K1Q13233 1512 aa28.55■■■□□ 2.16
PEX6-201ENST00000244546 CDK13Q14004 1512 aaKnown RBP28.52■■■□□ 2.16
PEX6-201ENST00000244546 RAB3GAP2Q9H2M9 1393 aa28.52■■■□□ 2.16
PEX6-201ENST00000244546 TRIM52Q96A61 297 aa28.49■■■□□ 2.15
PEX6-201ENST00000244546 ERICH6Q7L0X2 663 aa28.48■■■□□ 2.15
PEX6-201ENST00000244546 CHIC2Q9UKJ5 165 aa28.46■■■□□ 2.15
PEX6-201ENST00000244546 KIAA0586Q9BVV6 1533 aa28.46■■■□□ 2.15
PEX6-201ENST00000244546 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
PEX6-201ENST00000244546 MAGI3Q5TCQ9 1506 aa28.46■■■□□ 2.15
PEX6-201ENST00000244546 DDX10Q13206 875 aaKnown RBP28.45■■■□□ 2.14
PEX6-201ENST00000244546 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
PEX6-201ENST00000244546 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
PEX6-201ENST00000244546 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
PEX6-201ENST00000244546 NCOA2Q15596 1464 aa28.42■■■□□ 2.14
PEX6-201ENST00000244546 FANCIQ9NVI1 1328 aa28.41■■■□□ 2.14
PEX6-201ENST00000244546 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
PEX6-201ENST00000244546 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
PEX6-201ENST00000244546 EPRSP07814 1512 aaKnown RBP28.37■■■□□ 2.13
PEX6-201ENST00000244546 UGGT2Q9NYU1 1516 aa28.35■■■□□ 2.13
PEX6-201ENST00000244546 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
PEX6-201ENST00000244546 SIN3AQ96ST3 1273 aa28.34■■■□□ 2.13
PEX6-201ENST00000244546 RRP7BPQ9NSQ0 103 aa28.34■■■□□ 2.13
PEX6-201ENST00000244546 PTPRKQ15262 1439 aa28.33■■■□□ 2.13
PEX6-201ENST00000244546 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
PEX6-201ENST00000244546 DEKP35659 375 aaKnown RBP28.33■■■□□ 2.13
PEX6-201ENST00000244546 KIAA0556O60303 1618 aa28.32■■■□□ 2.12
PEX6-201ENST00000244546 ZNF644Q9H582 1327 aaPredicted RBP28.28■■■□□ 2.12
PEX6-201ENST00000244546 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
PEX6-201ENST00000244546 HECW1Q76N89 1606 aa28.26■■■□□ 2.11
PEX6-201ENST00000244546 IRX6P78412 446 aaPredicted RBP28.25■■■□□ 2.11
PEX6-201ENST00000244546 CDK11AQ9UQ88 783 aaPredicted RBP28.25■■■□□ 2.11
PEX6-201ENST00000244546 NUP153P49790 1475 aaKnown RBP28.24■■■□□ 2.11
PEX6-201ENST00000244546 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
PEX6-201ENST00000244546 ZNF777Q9ULD5 760 aaPredicted RBP28.23■■■□□ 2.11
PEX6-201ENST00000244546 ANO8Q9HCE9 1232 aaPredicted RBP28.22■■■□□ 2.11
PEX6-201ENST00000244546 EHBP1L1Q8N3D4 1523 aa28.21■■■□□ 2.11
PEX6-201ENST00000244546 CCDC18Q5T9S5 1454 aa28.21■■■□□ 2.11
PEX6-201ENST00000244546 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
PEX6-201ENST00000244546 NUP160Q12769 1436 aa28.2■■■□□ 2.11
PEX6-201ENST00000244546 PRG4Q92954 1404 aaPredicted RBP28.2■■■□□ 2.11
PEX6-201ENST00000244546 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms