RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 MAP3K1Q13233 1512 aa14.72□□□□□ -0.05
MCM3-201ENST00000229854 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
MCM3-201ENST00000229854 IGF1RP08069 1367 aa14.71□□□□□ -0.05
MCM3-201ENST00000229854 CUX2O14529 1486 aa14.71□□□□□ -0.05
MCM3-201ENST00000229854 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
MCM3-201ENST00000229854 MSH5O43196 834 aa14.69□□□□□ -0.06
MCM3-201ENST00000229854 CFAP43Q8NDM7 1665 aa14.67□□□□□ -0.06
MCM3-201ENST00000229854 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
MCM3-201ENST00000229854 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
MCM3-201ENST00000229854 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
MCM3-201ENST00000229854 ABCA10Q8WWZ4 1543 aa14.65□□□□□ -0.06
MCM3-201ENST00000229854 CUL7Q14999 1698 aa14.64□□□□□ -0.07
MCM3-201ENST00000229854 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
MCM3-201ENST00000229854 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
MCM3-201ENST00000229854 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
MCM3-201ENST00000229854 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
MCM3-201ENST00000229854 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
MCM3-201ENST00000229854 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
MCM3-201ENST00000229854 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
MCM3-201ENST00000229854 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
MCM3-201ENST00000229854 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
MCM3-201ENST00000229854 PCF11O94913 1555 aaKnown RBP14.57□□□□□ -0.08
MCM3-201ENST00000229854 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
MCM3-201ENST00000229854 NESP48681 1621 aa14.54□□□□□ -0.08
MCM3-201ENST00000229854 CDK11AQ9UQ88 783 aaPredicted RBP14.54□□□□□ -0.08
MCM3-201ENST00000229854 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
MCM3-201ENST00000229854 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
MCM3-201ENST00000229854 CCNB3Q8WWL7 1395 aa14.53□□□□□ -0.08
MCM3-201ENST00000229854 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.08
MCM3-201ENST00000229854 DEKP35659 375 aaKnown RBP14.52□□□□□ -0.08
MCM3-201ENST00000229854 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.099e-8■■■■■ 47.8
MCM3-201ENST00000229854 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.09
MCM3-201ENST00000229854 SAMD9Q5K651 1589 aa14.5□□□□□ -0.09
MCM3-201ENST00000229854 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
MCM3-201ENST00000229854 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
MCM3-201ENST00000229854 IRX6P78412 446 aaPredicted RBP14.49□□□□□ -0.09
MCM3-201ENST00000229854 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
MCM3-201ENST00000229854 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
MCM3-201ENST00000229854 MYT1LQ9UL68 1186 aa14.46□□□□□ -0.09
MCM3-201ENST00000229854 HIRIP3Q9BW71 556 aaPredicted RBP14.45□□□□□ -0.1
MCM3-201ENST00000229854 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
MCM3-201ENST00000229854 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
MCM3-201ENST00000229854 ANP32CO43423 234 aa14.45□□□□□ -0.1
MCM3-201ENST00000229854 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
MCM3-201ENST00000229854 CASKIN1Q8WXD9 1431 aa14.44□□□□□ -0.1
MCM3-201ENST00000229854 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
MCM3-201ENST00000229854 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
MCM3-201ENST00000229854 NBR1Q14596 966 aa14.41□□□□□ -0.1
MCM3-201ENST00000229854 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
MCM3-201ENST00000229854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.4□□□□□ -0.1
MCM3-201ENST00000229854 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
MCM3-201ENST00000229854 FHOD3Q2V2M9 1422 aa14.38□□□□□ -0.11
MCM3-201ENST00000229854 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
MCM3-201ENST00000229854 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
MCM3-201ENST00000229854 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
MCM3-201ENST00000229854 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
MCM3-201ENST00000229854 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
MCM3-201ENST00000229854 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
MCM3-201ENST00000229854 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
MCM3-201ENST00000229854 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
MCM3-201ENST00000229854 FMN1Q68DA7 1419 aa14.34□□□□□ -0.11
MCM3-201ENST00000229854 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.12
MCM3-201ENST00000229854 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
MCM3-201ENST00000229854 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
MCM3-201ENST00000229854 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
MCM3-201ENST00000229854 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
MCM3-201ENST00000229854 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
MCM3-201ENST00000229854 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
MCM3-201ENST00000229854 EHBP1L1Q8N3D4 1523 aa14.26□□□□□ -0.13
MCM3-201ENST00000229854 FGD6Q6ZV73 1430 aa14.26□□□□□ -0.13
MCM3-201ENST00000229854 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
MCM3-201ENST00000229854 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
MCM3-201ENST00000229854 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
MCM3-201ENST00000229854 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
MCM3-201ENST00000229854 RTL5Q5HYW3 569 aaPredicted RBP14.24□□□□□ -0.13
MCM3-201ENST00000229854 UGGT2Q9NYU1 1516 aa14.24□□□□□ -0.13
MCM3-201ENST00000229854 MAGI3Q5TCQ9 1506 aa14.23□□□□□ -0.13
MCM3-201ENST00000229854 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
MCM3-201ENST00000229854 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
MCM3-201ENST00000229854 IQGAP2Q13576 1575 aa14.23□□□□□ -0.13
MCM3-201ENST00000229854 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
MCM3-201ENST00000229854 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
MCM3-201ENST00000229854 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
MCM3-201ENST00000229854 GCC2Q8IWJ2 1684 aa14.21□□□□□ -0.13
MCM3-201ENST00000229854 CCDC18Q5T9S5 1454 aa14.21□□□□□ -0.14
MCM3-201ENST00000229854 NCOA2Q15596 1464 aa14.2□□□□□ -0.14
MCM3-201ENST00000229854 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
MCM3-201ENST00000229854 WDR62O43379 1518 aa14.2□□□□□ -0.14
MCM3-201ENST00000229854 HFM1A2PYH4 1435 aa14.2□□□□□ -0.14
MCM3-201ENST00000229854 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
MCM3-201ENST00000229854 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
MCM3-201ENST00000229854 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
MCM3-201ENST00000229854 MYOM3Q5VTT5 1437 aa14.19□□□□□ -0.14
MCM3-201ENST00000229854 FAM50AQ14320 339 aaKnown RBP14.18□□□□□ -0.14
MCM3-201ENST00000229854 IL27Q8NEV9 243 aa14.18□□□□□ -0.14
MCM3-201ENST00000229854 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
MCM3-201ENST00000229854 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
MCM3-201ENST00000229854 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
MCM3-201ENST00000229854 KDM5BQ9UGL1 1544 aa14.13□□□□□ -0.15
MCM3-201ENST00000229854 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms