RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
SLC44A4-202ENST00000229729 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
SLC44A4-202ENST00000229729 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
SLC44A4-202ENST00000229729 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
SLC44A4-202ENST00000229729 ANP32CO43423 234 aa17.81■□□□□ 0.44
SLC44A4-202ENST00000229729 PRXQ9BXM0 1461 aa17.77■□□□□ 0.44
SLC44A4-202ENST00000229729 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.43
SLC44A4-202ENST00000229729 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
SLC44A4-202ENST00000229729 DEKP35659 375 aaKnown RBP17.72■□□□□ 0.43
SLC44A4-202ENST00000229729 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
SLC44A4-202ENST00000229729 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
SLC44A4-202ENST00000229729 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
SLC44A4-202ENST00000229729 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
SLC44A4-202ENST00000229729 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
SLC44A4-202ENST00000229729 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
SLC44A4-202ENST00000229729 PPP4R2Q9NY27 417 aa17.62■□□□□ 0.41
SLC44A4-202ENST00000229729 CUX1P39880 1505 aa17.61■□□□□ 0.41
SLC44A4-202ENST00000229729 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
SLC44A4-202ENST00000229729 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
SLC44A4-202ENST00000229729 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
SLC44A4-202ENST00000229729 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.4
SLC44A4-202ENST00000229729 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
SLC44A4-202ENST00000229729 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
SLC44A4-202ENST00000229729 CFTRP13569 1480 aa17.53■□□□□ 0.4
SLC44A4-202ENST00000229729 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
SLC44A4-202ENST00000229729 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
SLC44A4-202ENST00000229729 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
SLC44A4-202ENST00000229729 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
SLC44A4-202ENST00000229729 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
SLC44A4-202ENST00000229729 NBR1Q14596 966 aa17.45■□□□□ 0.38
SLC44A4-202ENST00000229729 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
SLC44A4-202ENST00000229729 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
SLC44A4-202ENST00000229729 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
SLC44A4-202ENST00000229729 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
SLC44A4-202ENST00000229729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLC44A4-202ENST00000229729 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
SLC44A4-202ENST00000229729 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
SLC44A4-202ENST00000229729 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
SLC44A4-202ENST00000229729 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
SLC44A4-202ENST00000229729 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
SLC44A4-202ENST00000229729 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
SLC44A4-202ENST00000229729 UACAQ9BZF9 1416 aa17.34■□□□□ 0.37
SLC44A4-202ENST00000229729 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
SLC44A4-202ENST00000229729 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
SLC44A4-202ENST00000229729 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
SLC44A4-202ENST00000229729 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
SLC44A4-202ENST00000229729 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
SLC44A4-202ENST00000229729 IGF1RP08069 1367 aa17.31■□□□□ 0.36
SLC44A4-202ENST00000229729 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
SLC44A4-202ENST00000229729 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
SLC44A4-202ENST00000229729 HFM1A2PYH4 1435 aa17.27■□□□□ 0.36
SLC44A4-202ENST00000229729 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
SLC44A4-202ENST00000229729 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
SLC44A4-202ENST00000229729 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
SLC44A4-202ENST00000229729 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
SLC44A4-202ENST00000229729 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
SLC44A4-202ENST00000229729 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
SLC44A4-202ENST00000229729 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
SLC44A4-202ENST00000229729 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
SLC44A4-202ENST00000229729 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
SLC44A4-202ENST00000229729 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
SLC44A4-202ENST00000229729 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
SLC44A4-202ENST00000229729 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
SLC44A4-202ENST00000229729 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
SLC44A4-202ENST00000229729 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
SLC44A4-202ENST00000229729 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
SLC44A4-202ENST00000229729 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
SLC44A4-202ENST00000229729 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
SLC44A4-202ENST00000229729 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
SLC44A4-202ENST00000229729 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■■ 29.2
SLC44A4-202ENST00000229729 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
SLC44A4-202ENST00000229729 NAIPQ13075 1403 aa17.16■□□□□ 0.34
SLC44A4-202ENST00000229729 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
SLC44A4-202ENST00000229729 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
SLC44A4-202ENST00000229729 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
SLC44A4-202ENST00000229729 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
SLC44A4-202ENST00000229729 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
SLC44A4-202ENST00000229729 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
SLC44A4-202ENST00000229729 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
SLC44A4-202ENST00000229729 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
SLC44A4-202ENST00000229729 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
SLC44A4-202ENST00000229729 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
SLC44A4-202ENST00000229729 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
SLC44A4-202ENST00000229729 UBE2Q2Q8WVN8 375 aa17.11■□□□□ 0.33
SLC44A4-202ENST00000229729 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
SLC44A4-202ENST00000229729 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
SLC44A4-202ENST00000229729 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
SLC44A4-202ENST00000229729 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
SLC44A4-202ENST00000229729 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
SLC44A4-202ENST00000229729 HECW1Q76N89 1606 aa17.09■□□□□ 0.33
SLC44A4-202ENST00000229729 NEFMP07197 916 aa17.09■□□□□ 0.33
SLC44A4-202ENST00000229729 CUL7Q14999 1698 aa17.08■□□□□ 0.32
SLC44A4-202ENST00000229729 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
SLC44A4-202ENST00000229729 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
SLC44A4-202ENST00000229729 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
SLC44A4-202ENST00000229729 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
SLC44A4-202ENST00000229729 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
SLC44A4-202ENST00000229729 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
SLC44A4-202ENST00000229729 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
SLC44A4-202ENST00000229729 MYOM3Q5VTT5 1437 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms