RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
RPA3-201ENST00000223129 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
RPA3-201ENST00000223129 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
RPA3-201ENST00000223129 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
RPA3-201ENST00000223129 CTTNBP2Q8WZ74 1663 aa24.55■■□□□ 1.52
RPA3-201ENST00000223129 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
RPA3-201ENST00000223129 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
RPA3-201ENST00000223129 ARHGEF11O15085 1522 aa24.48■■□□□ 1.51
RPA3-201ENST00000223129 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
RPA3-201ENST00000223129 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
RPA3-201ENST00000223129 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
RPA3-201ENST00000223129 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.51
RPA3-201ENST00000223129 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.51
RPA3-201ENST00000223129 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.51
RPA3-201ENST00000223129 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.51
RPA3-201ENST00000223129 UGGT2Q9NYU1 1516 aa24.4■■□□□ 1.5
RPA3-201ENST00000223129 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
RPA3-201ENST00000223129 CARMIL2Q6F5E8 1435 aa24.34■■□□□ 1.49
RPA3-201ENST00000223129 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
RPA3-201ENST00000223129 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
RPA3-201ENST00000223129 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
RPA3-201ENST00000223129 TTBK1Q5TCY1 1321 aaPredicted RBP24.32■■□□□ 1.48
RPA3-201ENST00000223129 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
RPA3-201ENST00000223129 KIAA0556O60303 1618 aa24.3■■□□□ 1.48
RPA3-201ENST00000223129 SAMD9Q5K651 1589 aa24.26■■□□□ 1.47
RPA3-201ENST00000223129 PTPRGP23470 1445 aa24.22■■□□□ 1.47
RPA3-201ENST00000223129 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
RPA3-201ENST00000223129 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
RPA3-201ENST00000223129 EFCAB5A4FU69 1503 aa24.19■■□□□ 1.46
RPA3-201ENST00000223129 CLIP1P30622 1438 aa24.16■■□□□ 1.46
RPA3-201ENST00000223129 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
RPA3-201ENST00000223129 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
RPA3-201ENST00000223129 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
RPA3-201ENST00000223129 ADCY10Q96PN6 1610 aa24.04■■□□□ 1.44
RPA3-201ENST00000223129 ABCA8O94911 1581 aa24.01■■□□□ 1.43
RPA3-201ENST00000223129 ABCC2Q92887 1545 aa23.99■■□□□ 1.43
RPA3-201ENST00000223129 FMN1Q68DA7 1419 aa23.99■■□□□ 1.43
RPA3-201ENST00000223129 UHRF1BP1LA0JNW5 1464 aa23.98■■□□□ 1.43
RPA3-201ENST00000223129 RAPGEF6Q8TEU7 1601 aa23.96■■□□□ 1.43
RPA3-201ENST00000223129 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
RPA3-201ENST00000223129 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
RPA3-201ENST00000223129 NPM1P06748 294 aaKnown RBP eCLIP23.94■■□□□ 1.42
RPA3-201ENST00000223129 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
RPA3-201ENST00000223129 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
RPA3-201ENST00000223129 PCF11O94913 1555 aaKnown RBP23.87■■□□□ 1.41
RPA3-201ENST00000223129 ZCCHC11Q5TAX3 1644 aaKnown RBP23.86■■□□□ 1.41
RPA3-201ENST00000223129 ATP10BO94823 1461 aa23.85■■□□□ 1.41
RPA3-201ENST00000223129 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
RPA3-201ENST00000223129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.84■■□□□ 1.41
RPA3-201ENST00000223129 HNRNPUL2Q1KMD3 747 aaKnown RBP23.84■■□□□ 1.41
RPA3-201ENST00000223129 HECW1Q76N89 1606 aa23.83■■□□□ 1.4
RPA3-201ENST00000223129 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
RPA3-201ENST00000223129 FYCO1Q9BQS8 1478 aa23.79■■□□□ 1.4
RPA3-201ENST00000223129 LRRIQ1Q96JM4 1722 aa23.79■■□□□ 1.4
RPA3-201ENST00000223129 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
RPA3-201ENST00000223129 CDK13Q14004 1512 aaKnown RBP23.79■■□□□ 1.4
RPA3-201ENST00000223129 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
RPA3-201ENST00000223129 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
RPA3-201ENST00000223129 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.38
RPA3-201ENST00000223129 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
RPA3-201ENST00000223129 KCNH8Q96L42 1107 aa23.69■■□□□ 1.38
RPA3-201ENST00000223129 CCDC18Q5T9S5 1454 aa23.69■■□□□ 1.38
RPA3-201ENST00000223129 WDR7Q9Y4E6 1490 aa23.69■■□□□ 1.38
RPA3-201ENST00000223129 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.38
RPA3-201ENST00000223129 CDK11AQ9UQ88 783 aaPredicted RBP23.64■■□□□ 1.38
RPA3-201ENST00000223129 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.38
RPA3-201ENST00000223129 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
RPA3-201ENST00000223129 MAGI3Q5TCQ9 1506 aa23.6■■□□□ 1.37
RPA3-201ENST00000223129 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
RPA3-201ENST00000223129 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
RPA3-201ENST00000223129 APLP2Q06481 763 aa23.57■■□□□ 1.36
RPA3-201ENST00000223129 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
RPA3-201ENST00000223129 CFAP43Q8NDM7 1665 aa23.56■■□□□ 1.36
RPA3-201ENST00000223129 KANK4Q5T7N3 995 aaPredicted RBP23.54■■□□□ 1.36
RPA3-201ENST00000223129 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
RPA3-201ENST00000223129 GLI2P10070 1586 aa23.53■■□□□ 1.36
RPA3-201ENST00000223129 MAP3K1Q13233 1512 aa23.51■■□□□ 1.35
RPA3-201ENST00000223129 KIF14Q15058 1648 aa23.51■■□□□ 1.35
RPA3-201ENST00000223129 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
RPA3-201ENST00000223129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.48■■□□□ 1.351e-6■■■■□ 23.9
RPA3-201ENST00000223129 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
RPA3-201ENST00000223129 ABCA9Q8IUA7 1624 aa23.47■■□□□ 1.35
RPA3-201ENST00000223129 EHBP1L1Q8N3D4 1523 aa23.46■■□□□ 1.35
RPA3-201ENST00000223129 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
RPA3-201ENST00000223129 CD109Q6YHK3 1445 aa23.46■■□□□ 1.35
RPA3-201ENST00000223129 TTC37Q6PGP7 1564 aa23.45■■□□□ 1.34
RPA3-201ENST00000223129 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
RPA3-201ENST00000223129 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
RPA3-201ENST00000223129 SUPT6HQ7KZ85 1726 aaKnown RBP23.37■■□□□ 1.33
RPA3-201ENST00000223129 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
RPA3-201ENST00000223129 PLCH2O75038 1416 aa23.34■■□□□ 1.33
RPA3-201ENST00000223129 MYO5CQ9NQX4 1742 aa23.34■■□□□ 1.33
RPA3-201ENST00000223129 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.33
RPA3-201ENST00000223129 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
RPA3-201ENST00000223129 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
RPA3-201ENST00000223129 TEX14Q8IWB6 1497 aa23.3■■□□□ 1.32
RPA3-201ENST00000223129 CDC42BPBQ9Y5S2 1711 aa23.3■■□□□ 1.32
RPA3-201ENST00000223129 PREX2Q70Z35 1606 aa23.28■■□□□ 1.32
RPA3-201ENST00000223129 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
RPA3-201ENST00000223129 FANCAO15360 1455 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms