RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 CLASP1Q7Z460 1538 aa35.12■■■■□ 3.21
RAB3A-201ENST00000222256 CTTNBP2Q8WZ74 1663 aa35.11■■■■□ 3.21
RAB3A-201ENST00000222256 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
RAB3A-201ENST00000222256 IQGAP2Q13576 1575 aa35.03■■■■□ 3.2
RAB3A-201ENST00000222256 LOC105371045A0A1W2PR82 267 aa35.01■■■■□ 3.2
RAB3A-201ENST00000222256 TNIKQ9UKE5 1360 aa34.95■■■■□ 3.19
RAB3A-201ENST00000222256 JPH4Q96JJ6 628 aa34.93■■■■□ 3.18
RAB3A-201ENST00000222256 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
RAB3A-201ENST00000222256 UGGT2Q9NYU1 1516 aa34.86■■■■□ 3.17
RAB3A-201ENST00000222256 PRG4Q92954 1404 aaPredicted RBP34.79■■■■□ 3.16
RAB3A-201ENST00000222256 RANGAP1P46060 587 aaPredicted RBP34.75■■■■□ 3.15
RAB3A-201ENST00000222256 CARMIL2Q6F5E8 1435 aa34.72■■■■□ 3.15
RAB3A-201ENST00000222256 DISP1Q96F81 1524 aa34.72■■■■□ 3.15
RAB3A-201ENST00000222256 SAMD9Q5K651 1589 aa34.69■■■■□ 3.14
RAB3A-201ENST00000222256 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
RAB3A-201ENST00000222256 ARHGEF11O15085 1522 aa34.68■■■■□ 3.14
RAB3A-201ENST00000222256 EFCAB5A4FU69 1503 aa34.68■■■■□ 3.14
RAB3A-201ENST00000222256 KIAA0556O60303 1618 aa34.68■■■■□ 3.14
RAB3A-201ENST00000222256 DNAJC5Q9H3Z4 198 aa34.66■■■■□ 3.14
RAB3A-201ENST00000222256 CEP162Q5TB80 1403 aa34.65■■■■□ 3.14
RAB3A-201ENST00000222256 CLIP1P30622 1438 aa34.64■■■■□ 3.14
RAB3A-201ENST00000222256 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
RAB3A-201ENST00000222256 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
RAB3A-201ENST00000222256 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
RAB3A-201ENST00000222256 ARHGAP35Q9NRY4 1499 aa34.6■■■■□ 3.13
RAB3A-201ENST00000222256 P3H3Q8IVL6 736 aa34.57■■■■□ 3.12
RAB3A-201ENST00000222256 FHOD3Q2V2M9 1422 aa34.51■■■■□ 3.11
RAB3A-201ENST00000222256 PTPRGP23470 1445 aa34.48■■■■□ 3.11
RAB3A-201ENST00000222256 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
RAB3A-201ENST00000222256 TTBK1Q5TCY1 1321 aaPredicted RBP34.42■■■■□ 3.1
RAB3A-201ENST00000222256 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
RAB3A-201ENST00000222256 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
RAB3A-201ENST00000222256 PLB1Q6P1J6 1458 aa34.27■■■■□ 3.08
RAB3A-201ENST00000222256 UACAQ9BZF9 1416 aa34.27■■■■□ 3.08
RAB3A-201ENST00000222256 ABCA8O94911 1581 aa34.26■■■■□ 3.08
RAB3A-201ENST00000222256 RAPGEF6Q8TEU7 1601 aa34.22■■■■□ 3.07
RAB3A-201ENST00000222256 UHRF1BP1LA0JNW5 1464 aa34.21■■■■□ 3.07
RAB3A-201ENST00000222256 ABCC2Q92887 1545 aa34.2■■■■□ 3.06
RAB3A-201ENST00000222256 VPS8Q8N3P4 1428 aa34.19■■■■□ 3.06
RAB3A-201ENST00000222256 ADCY10Q96PN6 1610 aa34.17■■■■□ 3.06
RAB3A-201ENST00000222256 CASKIN1Q8WXD9 1431 aa34.16■■■■□ 3.06
RAB3A-201ENST00000222256 PCF11O94913 1555 aaKnown RBP34.15■■■■□ 3.06
RAB3A-201ENST00000222256 FYCO1Q9BQS8 1478 aa34.12■■■■□ 3.05
RAB3A-201ENST00000222256 HECW1Q76N89 1606 aa34.1■■■■□ 3.05
RAB3A-201ENST00000222256 NUP153P49790 1475 aaKnown RBP34.1■■■■□ 3.05
RAB3A-201ENST00000222256 ATP1B4Q9UN42 357 aaPredicted RBP34.07■■■■□ 3.04
RAB3A-201ENST00000222256 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
RAB3A-201ENST00000222256 NPM1P06748 294 aaKnown RBP eCLIP33.99■■■■□ 3.03
RAB3A-201ENST00000222256 ATP10BO94823 1461 aa33.99■■■■□ 3.03
RAB3A-201ENST00000222256 EPRSP07814 1512 aaKnown RBP33.99■■■■□ 3.03
RAB3A-201ENST00000222256 ARID3CA6NKF2 412 aa33.97■■■■□ 3.03
RAB3A-201ENST00000222256 LRRIQ1Q96JM4 1722 aa33.97■■■■□ 3.03
RAB3A-201ENST00000222256 ZCCHC11Q5TAX3 1644 aaKnown RBP33.97■■■■□ 3.03
RAB3A-201ENST00000222256 CCDC18Q5T9S5 1454 aa33.95■■■■□ 3.03
RAB3A-201ENST00000222256 CDK13Q14004 1512 aaKnown RBP33.92■■■■□ 3.02
RAB3A-201ENST00000222256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.89■■■■□ 3.02
RAB3A-201ENST00000222256 HNRNPUL2Q1KMD3 747 aaKnown RBP33.89■■■■□ 3.02
RAB3A-201ENST00000222256 MAPKBP1O60336 1514 aa33.82■■■■□ 3.01
RAB3A-201ENST00000222256 MAP3K1Q13233 1512 aa33.82■■■■□ 3
RAB3A-201ENST00000222256 CFAP43Q8NDM7 1665 aa33.81■■■■□ 3
RAB3A-201ENST00000222256 APLP2Q06481 763 aa33.81■■■■□ 3
RAB3A-201ENST00000222256 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
RAB3A-201ENST00000222256 TIAM1Q13009 1591 aa33.8■■■■□ 3
RAB3A-201ENST00000222256 ASXL2Q76L83 1435 aa33.78■■■■□ 3
RAB3A-201ENST00000222256 PLEKHD1A6NEE1 506 aa33.77■■■■□ 3
RAB3A-201ENST00000222256 WDR7Q9Y4E6 1490 aa33.73■■■□□ 2.99
RAB3A-201ENST00000222256 MAGI3Q5TCQ9 1506 aa33.69■■■□□ 2.98
RAB3A-201ENST00000222256 TROQ12816 1431 aaPredicted RBP33.68■■■□□ 2.98
RAB3A-201ENST00000222256 MTUS2Q5JR59 1369 aa33.66■■■□□ 2.98
RAB3A-201ENST00000222256 LRRC9Q6ZRR7 1453 aa33.65■■■□□ 2.98
RAB3A-201ENST00000222256 EHBP1L1Q8N3D4 1523 aa33.63■■■□□ 2.97
RAB3A-201ENST00000222256 KANK4Q5T7N3 995 aaPredicted RBP33.62■■■□□ 2.97
RAB3A-201ENST00000222256 KCNH8Q96L42 1107 aa33.6■■■□□ 2.97
RAB3A-201ENST00000222256 ABCC10Q5T3U5 1492 aa33.57■■■□□ 2.96
RAB3A-201ENST00000222256 KIF14Q15058 1648 aa33.55■■■□□ 2.96
RAB3A-201ENST00000222256 DIP2BQ9P265 1576 aa33.54■■■□□ 2.96
RAB3A-201ENST00000222256 GLI2P10070 1586 aa33.5■■■□□ 2.95
RAB3A-201ENST00000222256 SUPT6HQ7KZ85 1726 aaKnown RBP33.5■■■□□ 2.95
RAB3A-201ENST00000222256 KIF13AQ9H1H9 1805 aa33.47■■■□□ 2.95
RAB3A-201ENST00000222256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.47■■■□□ 2.95
RAB3A-201ENST00000222256 FAM69CQ0P6D2 419 aa33.47■■■□□ 2.95
RAB3A-201ENST00000222256 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
RAB3A-201ENST00000222256 NCOA2Q15596 1464 aa33.43■■■□□ 2.94
RAB3A-201ENST00000222256 PPARGC1BQ86YN6 1023 aaKnown RBP33.43■■■□□ 2.94
RAB3A-201ENST00000222256 TTC37Q6PGP7 1564 aa33.42■■■□□ 2.94
RAB3A-201ENST00000222256 TRHP20396 242 aaPredicted RBP33.38■■■□□ 2.93
RAB3A-201ENST00000222256 MAP3K4Q9Y6R4 1608 aa33.38■■■□□ 2.93
RAB3A-201ENST00000222256 CD109Q6YHK3 1445 aa33.35■■■□□ 2.93
RAB3A-201ENST00000222256 CCNB3Q8WWL7 1395 aa33.34■■■□□ 2.93
RAB3A-201ENST00000222256 MYO5CQ9NQX4 1742 aa33.33■■■□□ 2.93
RAB3A-201ENST00000222256 CDC42BPAQ5VT25 1732 aa33.3■■■□□ 2.92
RAB3A-201ENST00000222256 GPATCH8Q9UKJ3 1502 aaKnown RBP33.29■■■□□ 2.92
RAB3A-201ENST00000222256 PLCH2O75038 1416 aa33.29■■■□□ 2.92
RAB3A-201ENST00000222256 PREX2Q70Z35 1606 aa33.27■■■□□ 2.92
RAB3A-201ENST00000222256 ITSN2Q9NZM3 1697 aa33.27■■■□□ 2.92
RAB3A-201ENST00000222256 ARAP3Q8WWN8 1544 aa33.26■■■□□ 2.91
RAB3A-201ENST00000222256 PHLDB1Q86UU1 1377 aa33.25■■■□□ 2.91
RAB3A-201ENST00000222256 TSPOAP1O95153 1857 aa33.25■■■□□ 2.91
RAB3A-201ENST00000222256 CDC42BPBQ9Y5S2 1711 aa33.24■■■□□ 2.91
RAB3A-201ENST00000222256 MYOM3Q5VTT5 1437 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms