RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 GTF3C3Q9Y5Q9 886 aa35.67■■■■□ 3.3
SNTA1-201ENST00000217381 MIER1Q8N108 512 aa35.63■■■■□ 3.29
SNTA1-201ENST00000217381 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
SNTA1-201ENST00000217381 CUL7Q14999 1698 aa35.54■■■■□ 3.28
SNTA1-201ENST00000217381 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
SNTA1-201ENST00000217381 CFAP43Q8NDM7 1665 aa35.52■■■■□ 3.28
SNTA1-201ENST00000217381 PCF11O94913 1555 aaKnown RBP35.52■■■■□ 3.28
SNTA1-201ENST00000217381 LRRC9Q6ZRR7 1453 aa35.52■■■■□ 3.28
SNTA1-201ENST00000217381 URB2Q14146 1524 aaKnown RBP35.51■■■■□ 3.27
SNTA1-201ENST00000217381 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
SNTA1-201ENST00000217381 YTHDC1Q96MU7 727 aaKnown RBP35.45■■■■□ 3.27
SNTA1-201ENST00000217381 CTTNBP2Q8WZ74 1663 aa35.45■■■■□ 3.27
SNTA1-201ENST00000217381 EFCAB5A4FU69 1503 aa35.42■■■■□ 3.26
SNTA1-201ENST00000217381 FHOD3Q2V2M9 1422 aa35.39■■■■□ 3.26
SNTA1-201ENST00000217381 PHLDB1Q86UU1 1377 aa35.38■■■■□ 3.25
SNTA1-201ENST00000217381 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
SNTA1-201ENST00000217381 P3H3Q8IVL6 736 aa35.35■■■■□ 3.25
SNTA1-201ENST00000217381 ITGAEP38570 1179 aa35.35■■■■□ 3.25
SNTA1-201ENST00000217381 FYCO1Q9BQS8 1478 aa35.33■■■■□ 3.25
SNTA1-201ENST00000217381 RAB3GAP2Q9H2M9 1393 aa35.32■■■■□ 3.24
SNTA1-201ENST00000217381 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.243e-6■■■■■ 30.9
SNTA1-201ENST00000217381 CASKIN1Q8WXD9 1431 aa35.27■■■■□ 3.24
SNTA1-201ENST00000217381 MAPKBP1O60336 1514 aa35.25■■■■□ 3.23
SNTA1-201ENST00000217381 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
SNTA1-201ENST00000217381 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
SNTA1-201ENST00000217381 SETD5Q9C0A6 1442 aa35.21■■■■□ 3.23
SNTA1-201ENST00000217381 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
SNTA1-201ENST00000217381 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
SNTA1-201ENST00000217381 SNAPC4Q5SXM2 1469 aa35.17■■■■□ 3.22
SNTA1-201ENST00000217381 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
SNTA1-201ENST00000217381 FMN1Q68DA7 1419 aa35.12■■■■□ 3.21
SNTA1-201ENST00000217381 ATP1B4Q9UN42 357 aaPredicted RBP35.11■■■■□ 3.21
SNTA1-201ENST00000217381 TARBP1Q13395 1621 aaKnown RBP35.11■■■■□ 3.21
SNTA1-201ENST00000217381 FAM50AQ14320 339 aaKnown RBP35.07■■■■□ 3.21
SNTA1-201ENST00000217381 LRRIQ1Q96JM4 1722 aa35.06■■■■□ 3.2
SNTA1-201ENST00000217381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.03■■■■□ 3.2
SNTA1-201ENST00000217381 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
SNTA1-201ENST00000217381 FGD6Q6ZV73 1430 aa34.93■■■■□ 3.18
SNTA1-201ENST00000217381 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
SNTA1-201ENST00000217381 THOC2Q8NI27 1593 aaKnown RBP34.91■■■■□ 3.18
SNTA1-201ENST00000217381 MTUS2Q5JR59 1369 aa34.85■■■■□ 3.17
SNTA1-201ENST00000217381 SIN3AQ96ST3 1273 aa34.83■■■■□ 3.17
SNTA1-201ENST00000217381 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
SNTA1-201ENST00000217381 NCOA2Q15596 1464 aa34.79■■■■□ 3.16
SNTA1-201ENST00000217381 TIMELESSQ9UNS1 1208 aa34.77■■■■□ 3.16
SNTA1-201ENST00000217381 EHBP1L1Q8N3D4 1523 aa34.77■■■■□ 3.16
SNTA1-201ENST00000217381 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
SNTA1-201ENST00000217381 SUPT6HQ7KZ85 1726 aaKnown RBP34.76■■■■□ 3.15
SNTA1-201ENST00000217381 PTPRKQ15262 1439 aa34.75■■■■□ 3.15
SNTA1-201ENST00000217381 MYOM3Q5VTT5 1437 aa34.73■■■■□ 3.15
SNTA1-201ENST00000217381 MAGI3Q5TCQ9 1506 aa34.73■■■■□ 3.15
SNTA1-201ENST00000217381 ERCC6Q03468 1493 aa34.72■■■■□ 3.15
SNTA1-201ENST00000217381 IQGAP2Q13576 1575 aa34.72■■■■□ 3.15
SNTA1-201ENST00000217381 ARHGEF11O15085 1522 aa34.71■■■■□ 3.15
SNTA1-201ENST00000217381 UGGT2Q9NYU1 1516 aa34.69■■■■□ 3.14
SNTA1-201ENST00000217381 HFM1A2PYH4 1435 aa34.68■■■■□ 3.14
SNTA1-201ENST00000217381 PTPN23Q9H3S7 1636 aa34.67■■■■□ 3.14
SNTA1-201ENST00000217381 CCDC18Q5T9S5 1454 aa34.66■■■■□ 3.14
SNTA1-201ENST00000217381 HECW1Q76N89 1606 aa34.63■■■■□ 3.13
SNTA1-201ENST00000217381 PPP1R15AO75807 674 aaPredicted RBP34.59■■■■□ 3.13
SNTA1-201ENST00000217381 NAIPQ13075 1403 aa34.57■■■■□ 3.12
SNTA1-201ENST00000217381 UACAQ9BZF9 1416 aa34.57■■■■□ 3.12
SNTA1-201ENST00000217381 WDR62O43379 1518 aa34.54■■■■□ 3.12
SNTA1-201ENST00000217381 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
SNTA1-201ENST00000217381 EPRSP07814 1512 aaKnown RBP34.54■■■■□ 3.12
SNTA1-201ENST00000217381 IFT140Q96RY7 1462 aa34.53■■■■□ 3.12
SNTA1-201ENST00000217381 TCOF1Q13428 1488 aaKnown RBP34.51■■■■□ 3.12
SNTA1-201ENST00000217381 KCNH8Q96L42 1107 aa34.5■■■■□ 3.11
SNTA1-201ENST00000217381 DDX10Q13206 875 aaKnown RBP34.49■■■■□ 3.11
SNTA1-201ENST00000217381 CDK13Q14004 1512 aaKnown RBP34.48■■■■□ 3.11
SNTA1-201ENST00000217381 SUPT16HQ9Y5B9 1047 aaKnown RBP34.45■■■■□ 3.11
SNTA1-201ENST00000217381 TONSLQ96HA7 1378 aa34.44■■■■□ 3.1
SNTA1-201ENST00000217381 GCC2Q8IWJ2 1684 aa34.41■■■■□ 3.1
SNTA1-201ENST00000217381 KIAA0556O60303 1618 aa34.37■■■■□ 3.09
SNTA1-201ENST00000217381 DISP1Q96F81 1524 aa34.37■■■■□ 3.09
SNTA1-201ENST00000217381 KIAA0586Q9BVV6 1533 aa34.36■■■■□ 3.09
SNTA1-201ENST00000217381 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
SNTA1-201ENST00000217381 HIRIP3Q9BW71 556 aaPredicted RBP34.34■■■■□ 3.09
SNTA1-201ENST00000217381 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
SNTA1-201ENST00000217381 AKNAQ7Z591 1439 aa34.32■■■■□ 3.08
SNTA1-201ENST00000217381 GRIN2AQ12879 1464 aa34.3■■■■□ 3.08
SNTA1-201ENST00000217381 KDM5BQ9UGL1 1544 aa34.3■■■■□ 3.08
SNTA1-201ENST00000217381 KDM6BO15054 1643 aa34.28■■■■□ 3.08
SNTA1-201ENST00000217381 DENND4BO75064 1496 aaPredicted RBP34.27■■■■□ 3.08
SNTA1-201ENST00000217381 RRP7BPQ9NSQ0 103 aa34.25■■■■□ 3.07
SNTA1-201ENST00000217381 NUP153P49790 1475 aaKnown RBP34.23■■■■□ 3.07
SNTA1-201ENST00000217381 ARID3CA6NKF2 412 aa34.22■■■■□ 3.07
SNTA1-201ENST00000217381 CHIC2Q9UKJ5 165 aa34.22■■■■□ 3.07
SNTA1-201ENST00000217381 RAPGEF6Q8TEU7 1601 aa34.21■■■■□ 3.07
SNTA1-201ENST00000217381 CCER2I3L3R5 266 aa34.2■■■■□ 3.07
SNTA1-201ENST00000217381 ANP32CO43423 234 aa34.16■■■■□ 3.06
SNTA1-201ENST00000217381 MAGI1Q96QZ7 1491 aaPredicted RBP34.13■■■■□ 3.05
SNTA1-201ENST00000217381 CEP170Q5SW79 1584 aa34.12■■■■□ 3.05
SNTA1-201ENST00000217381 DNMT1P26358 1616 aaKnown RBP34.1■■■■□ 3.05
SNTA1-201ENST00000217381 DAPK1P53355 1430 aa34.09■■■■□ 3.05
SNTA1-201ENST00000217381 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
SNTA1-201ENST00000217381 ROCK1Q13464 1354 aa34.04■■■■□ 3.04
SNTA1-201ENST00000217381 ABCC5O15440 1437 aa34.04■■■■□ 3.04
SNTA1-201ENST00000217381 TRIM52Q96A61 297 aa34.03■■■■□ 3.04
SNTA1-201ENST00000217381 MPHOSPH9Q99550 1183 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms