RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 CCNB3Q8WWL7 1395 aa12.19□□□□□ -0.46
CSNK2A1-201ENST00000217244 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
CSNK2A1-201ENST00000217244 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
CSNK2A1-201ENST00000217244 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
CSNK2A1-201ENST00000217244 KCNH8Q96L42 1107 aa12.17□□□□□ -0.46
CSNK2A1-201ENST00000217244 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
CSNK2A1-201ENST00000217244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSNK2A1-201ENST00000217244 IGF1RP08069 1367 aa12.16□□□□□ -0.46
CSNK2A1-201ENST00000217244 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
CSNK2A1-201ENST00000217244 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
CSNK2A1-201ENST00000217244 FOXD1Q16676 465 aa12.14□□□□□ -0.47
CSNK2A1-201ENST00000217244 ANP32CO43423 234 aa12.13□□□□□ -0.47
CSNK2A1-201ENST00000217244 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
CSNK2A1-201ENST00000217244 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
CSNK2A1-201ENST00000217244 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
CSNK2A1-201ENST00000217244 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
CSNK2A1-201ENST00000217244 CUX1P39880 1505 aa12.09□□□□□ -0.47
CSNK2A1-201ENST00000217244 CFTRP13569 1480 aa12.08□□□□□ -0.48
CSNK2A1-201ENST00000217244 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
CSNK2A1-201ENST00000217244 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
CSNK2A1-201ENST00000217244 CFDP1Q9UEE9 299 aaPredicted RBP12.06□□□□□ -0.48
CSNK2A1-201ENST00000217244 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
CSNK2A1-201ENST00000217244 KIF21BO75037 1637 aa12.06□□□□□ -0.48
CSNK2A1-201ENST00000217244 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
CSNK2A1-201ENST00000217244 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
CSNK2A1-201ENST00000217244 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.489e-8■■■□□ 18.2
CSNK2A1-201ENST00000217244 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
CSNK2A1-201ENST00000217244 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
CSNK2A1-201ENST00000217244 TSPY4P0CV99 314 aa12.02□□□□□ -0.49
CSNK2A1-201ENST00000217244 TSPY10P0CW01 314 aa12.02□□□□□ -0.49
CSNK2A1-201ENST00000217244 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
CSNK2A1-201ENST00000217244 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
CSNK2A1-201ENST00000217244 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
CSNK2A1-201ENST00000217244 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
CSNK2A1-201ENST00000217244 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 SETD5Q9C0A6 1442 aa11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 PRXQ9BXM0 1461 aa11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
CSNK2A1-201ENST00000217244 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
CSNK2A1-201ENST00000217244 FKBP8Q14318 412 aa11.96□□□□□ -0.5
CSNK2A1-201ENST00000217244 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
CSNK2A1-201ENST00000217244 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
CSNK2A1-201ENST00000217244 HMGXB3Q12766 1538 aa11.94□□□□□ -0.5
CSNK2A1-201ENST00000217244 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
CSNK2A1-201ENST00000217244 POLA1P09884 1462 aaPredicted RBP11.94□□□□□ -0.5
CSNK2A1-201ENST00000217244 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
CSNK2A1-201ENST00000217244 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
CSNK2A1-201ENST00000217244 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
CSNK2A1-201ENST00000217244 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CSNK2A1-201ENST00000217244 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
CSNK2A1-201ENST00000217244 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■□□□ 14.5
CSNK2A1-201ENST00000217244 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
CSNK2A1-201ENST00000217244 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
CSNK2A1-201ENST00000217244 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSNK2A1-201ENST00000217244 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
CSNK2A1-201ENST00000217244 PKD2Q13563 968 aa11.85□□□□□ -0.51
CSNK2A1-201ENST00000217244 PPP1R15AO75807 674 aaPredicted RBP11.85□□□□□ -0.51
CSNK2A1-201ENST00000217244 L3MBTL2Q969R5 705 aa11.84□□□□□ -0.51
CSNK2A1-201ENST00000217244 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
CSNK2A1-201ENST00000217244 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
CSNK2A1-201ENST00000217244 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
CSNK2A1-201ENST00000217244 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
CSNK2A1-201ENST00000217244 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
CSNK2A1-201ENST00000217244 TMC1Q8TDI8 760 aa11.79□□□□□ -0.52
CSNK2A1-201ENST00000217244 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
CSNK2A1-201ENST00000217244 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
CSNK2A1-201ENST00000217244 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.53
CSNK2A1-201ENST00000217244 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
CSNK2A1-201ENST00000217244 NUP155O75694 1391 aa11.76□□□□□ -0.53
CSNK2A1-201ENST00000217244 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
CSNK2A1-201ENST00000217244 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
CSNK2A1-201ENST00000217244 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
CSNK2A1-201ENST00000217244 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
CSNK2A1-201ENST00000217244 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
CSNK2A1-201ENST00000217244 RRBP1Q9P2E9 1410 aaKnown RBP11.74□□□□□ -0.53
CSNK2A1-201ENST00000217244 NCOA2Q15596 1464 aa11.73□□□□□ -0.53
CSNK2A1-201ENST00000217244 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
CSNK2A1-201ENST00000217244 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.53
CSNK2A1-201ENST00000217244 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
CSNK2A1-201ENST00000217244 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.54
CSNK2A1-201ENST00000217244 MYOM3Q5VTT5 1437 aa11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 GGT6Q6P531 493 aa11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 PTPRGP23470 1445 aa11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
CSNK2A1-201ENST00000217244 TIAM1Q13009 1591 aa11.69□□□□□ -0.54
CSNK2A1-201ENST00000217244 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
CSNK2A1-201ENST00000217244 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
CSNK2A1-201ENST00000217244 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
CSNK2A1-201ENST00000217244 MRC2Q9UBG0 1479 aa11.68□□□□□ -0.54
CSNK2A1-201ENST00000217244 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
CSNK2A1-201ENST00000217244 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
CSNK2A1-201ENST00000217244 MLECQ14165 292 aa11.67□□□□□ -0.54
CSNK2A1-201ENST00000217244 SAFB2Q14151 953 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSNK2A1-201ENST00000217244 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
CSNK2A1-201ENST00000217244 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.54
CSNK2A1-201ENST00000217244 FYCO1Q9BQS8 1478 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms