RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
SNAP29-201ENST00000215730 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
SNAP29-201ENST00000215730 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
SNAP29-201ENST00000215730 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
SNAP29-201ENST00000215730 CLIP1P30622 1438 aa20.67■□□□□ 0.9
SNAP29-201ENST00000215730 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
SNAP29-201ENST00000215730 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
SNAP29-201ENST00000215730 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
SNAP29-201ENST00000215730 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
SNAP29-201ENST00000215730 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
SNAP29-201ENST00000215730 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
SNAP29-201ENST00000215730 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
SNAP29-201ENST00000215730 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
SNAP29-201ENST00000215730 MTUS2Q5JR59 1369 aa20.44■□□□□ 0.86
SNAP29-201ENST00000215730 PTPRGP23470 1445 aa20.41■□□□□ 0.86
SNAP29-201ENST00000215730 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
SNAP29-201ENST00000215730 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
SNAP29-201ENST00000215730 TSPY4P0CV99 314 aa20.39■□□□□ 0.86
SNAP29-201ENST00000215730 TSPY10P0CW01 314 aa20.39■□□□□ 0.86
SNAP29-201ENST00000215730 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
SNAP29-201ENST00000215730 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
SNAP29-201ENST00000215730 BCANQ96GW7 911 aa20.37■□□□□ 0.85
SNAP29-201ENST00000215730 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
SNAP29-201ENST00000215730 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
SNAP29-201ENST00000215730 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
SNAP29-201ENST00000215730 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
SNAP29-201ENST00000215730 KIF21BO75037 1637 aa20.35■□□□□ 0.85
SNAP29-201ENST00000215730 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
SNAP29-201ENST00000215730 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.84
SNAP29-201ENST00000215730 IGF1RP08069 1367 aa20.32■□□□□ 0.84
SNAP29-201ENST00000215730 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
SNAP29-201ENST00000215730 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
SNAP29-201ENST00000215730 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
SNAP29-201ENST00000215730 DHX57Q6P158 1386 aaKnown RBP20.28■□□□□ 0.84
SNAP29-201ENST00000215730 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
SNAP29-201ENST00000215730 CUX1P39880 1505 aa20.24■□□□□ 0.83
SNAP29-201ENST00000215730 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
SNAP29-201ENST00000215730 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
SNAP29-201ENST00000215730 MLECQ14165 292 aa20.21■□□□□ 0.83
SNAP29-201ENST00000215730 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
SNAP29-201ENST00000215730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.824e-7■□□□□ 9.2
SNAP29-201ENST00000215730 NEFLP07196 543 aa20.17■□□□□ 0.82
SNAP29-201ENST00000215730 EFCAB2Q5VUJ9 269 aa20.16■□□□□ 0.82
SNAP29-201ENST00000215730 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
SNAP29-201ENST00000215730 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
SNAP29-201ENST00000215730 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
SNAP29-201ENST00000215730 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
SNAP29-201ENST00000215730 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
SNAP29-201ENST00000215730 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
SNAP29-201ENST00000215730 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
SNAP29-201ENST00000215730 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.8
SNAP29-201ENST00000215730 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.8
SNAP29-201ENST00000215730 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
SNAP29-201ENST00000215730 FKBP8Q14318 412 aa20.07■□□□□ 0.8
SNAP29-201ENST00000215730 WDR62O43379 1518 aa20.06■□□□□ 0.8
SNAP29-201ENST00000215730 FHOD3Q2V2M9 1422 aa20.04■□□□□ 0.8
SNAP29-201ENST00000215730 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
SNAP29-201ENST00000215730 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
SNAP29-201ENST00000215730 ANP32EQ9BTT0 268 aa20■□□□□ 0.79
SNAP29-201ENST00000215730 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
SNAP29-201ENST00000215730 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
SNAP29-201ENST00000215730 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
SNAP29-201ENST00000215730 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
SNAP29-201ENST00000215730 PRXQ9BXM0 1461 aa19.96■□□□□ 0.79
SNAP29-201ENST00000215730 ANP32CO43423 234 aa19.95■□□□□ 0.78
SNAP29-201ENST00000215730 KIAA0586Q9BVV6 1533 aa19.95■□□□□ 0.78
SNAP29-201ENST00000215730 GGT6Q6P531 493 aa19.94■□□□□ 0.78
SNAP29-201ENST00000215730 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
SNAP29-201ENST00000215730 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
SNAP29-201ENST00000215730 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.78
SNAP29-201ENST00000215730 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
SNAP29-201ENST00000215730 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
SNAP29-201ENST00000215730 ZNF326Q5BKZ1 582 aaKnown RBP19.87■□□□□ 0.77
SNAP29-201ENST00000215730 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
SNAP29-201ENST00000215730 POLR3GLQ9BT43 218 aa19.84■□□□□ 0.77
SNAP29-201ENST00000215730 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.77
SNAP29-201ENST00000215730 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.76
SNAP29-201ENST00000215730 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
SNAP29-201ENST00000215730 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
SNAP29-201ENST00000215730 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
SNAP29-201ENST00000215730 C14orf37Q86TY3 774 aa19.79■□□□□ 0.76
SNAP29-201ENST00000215730 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNAP29-201ENST00000215730 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
SNAP29-201ENST00000215730 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
SNAP29-201ENST00000215730 TONSLQ96HA7 1378 aa19.77■□□□□ 0.75
SNAP29-201ENST00000215730 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
SNAP29-201ENST00000215730 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
SNAP29-201ENST00000215730 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
SNAP29-201ENST00000215730 KIF3BO15066 747 aa19.73■□□□□ 0.75
SNAP29-201ENST00000215730 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
SNAP29-201ENST00000215730 RBM19Q9Y4C8 960 aaKnown RBP19.73■□□□□ 0.75
SNAP29-201ENST00000215730 KANK1Q14678 1352 aa19.71■□□□□ 0.75
SNAP29-201ENST00000215730 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
SNAP29-201ENST00000215730 MAPKBP1O60336 1514 aa19.7■□□□□ 0.74
SNAP29-201ENST00000215730 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
SNAP29-201ENST00000215730 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
SNAP29-201ENST00000215730 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
SNAP29-201ENST00000215730 HNRNPUQ00839 825 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNAP29-201ENST00000215730 IQGAP2Q13576 1575 aa19.68■□□□□ 0.74
SNAP29-201ENST00000215730 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms