RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
POLR2E-201ENST00000215587 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
POLR2E-201ENST00000215587 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
POLR2E-201ENST00000215587 TNIKQ9UKE5 1360 aa26.77■■□□□ 1.88
POLR2E-201ENST00000215587 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
POLR2E-201ENST00000215587 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
POLR2E-201ENST00000215587 CHD1O14646 1710 aa26.74■■□□□ 1.87
POLR2E-201ENST00000215587 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
POLR2E-201ENST00000215587 FBLN2P98095 1184 aa26.7■■□□□ 1.86
POLR2E-201ENST00000215587 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
POLR2E-201ENST00000215587 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
POLR2E-201ENST00000215587 NUP160Q12769 1436 aa26.56■■□□□ 1.84
POLR2E-201ENST00000215587 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
POLR2E-201ENST00000215587 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
POLR2E-201ENST00000215587 IQGAP2Q13576 1575 aa26.52■■□□□ 1.84
POLR2E-201ENST00000215587 CLIP1P30622 1438 aa26.51■■□□□ 1.83
POLR2E-201ENST00000215587 RANGAP1P46060 587 aaPredicted RBP26.49■■□□□ 1.83
POLR2E-201ENST00000215587 CLASP1Q7Z460 1538 aa26.45■■□□□ 1.83
POLR2E-201ENST00000215587 EFCAB5A4FU69 1503 aa26.39■■□□□ 1.82
POLR2E-201ENST00000215587 UGGT2Q9NYU1 1516 aa26.38■■□□□ 1.81
POLR2E-201ENST00000215587 ARHGAP35Q9NRY4 1499 aa26.36■■□□□ 1.81
POLR2E-201ENST00000215587 SAMD9Q5K651 1589 aa26.32■■□□□ 1.8
POLR2E-201ENST00000215587 JPH4Q96JJ6 628 aa26.3■■□□□ 1.8
POLR2E-201ENST00000215587 CARMIL2Q6F5E8 1435 aa26.25■■□□□ 1.79
POLR2E-201ENST00000215587 P3H3Q8IVL6 736 aa26.25■■□□□ 1.79
POLR2E-201ENST00000215587 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
POLR2E-201ENST00000215587 KIAA0556O60303 1618 aa26.24■■□□□ 1.79
POLR2E-201ENST00000215587 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
POLR2E-201ENST00000215587 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
POLR2E-201ENST00000215587 VPS8Q8N3P4 1428 aa26.21■■□□□ 1.79
POLR2E-201ENST00000215587 PRG4Q92954 1404 aaPredicted RBP26.21■■□□□ 1.79
POLR2E-201ENST00000215587 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
POLR2E-201ENST00000215587 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
POLR2E-201ENST00000215587 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
POLR2E-201ENST00000215587 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
POLR2E-201ENST00000215587 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
POLR2E-201ENST00000215587 CASKIN1Q8WXD9 1431 aa26.01■■□□□ 1.75
POLR2E-201ENST00000215587 PTPRGP23470 1445 aa26■■□□□ 1.75
POLR2E-201ENST00000215587 APLP2Q06481 763 aa25.97■■□□□ 1.75
POLR2E-201ENST00000215587 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
POLR2E-201ENST00000215587 HECW1Q76N89 1606 aa25.94■■□□□ 1.74
POLR2E-201ENST00000215587 RAPGEF6Q8TEU7 1601 aa25.92■■□□□ 1.74
POLR2E-201ENST00000215587 PLB1Q6P1J6 1458 aa25.9■■□□□ 1.74
POLR2E-201ENST00000215587 ABCA8O94911 1581 aa25.88■■□□□ 1.73
POLR2E-201ENST00000215587 MAP3K1Q13233 1512 aa25.85■■□□□ 1.73
POLR2E-201ENST00000215587 KIF13AQ9H1H9 1805 aa25.85■■□□□ 1.73
POLR2E-201ENST00000215587 UACAQ9BZF9 1416 aa25.85■■□□□ 1.73
POLR2E-201ENST00000215587 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
POLR2E-201ENST00000215587 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
POLR2E-201ENST00000215587 TIAM1Q13009 1591 aa25.82■■□□□ 1.72
POLR2E-201ENST00000215587 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
POLR2E-201ENST00000215587 EPRSP07814 1512 aaKnown RBP25.8■■□□□ 1.72
POLR2E-201ENST00000215587 ABCC2Q92887 1545 aa25.79■■□□□ 1.72
POLR2E-201ENST00000215587 UHRF1BP1LA0JNW5 1464 aa25.77■■□□□ 1.72
POLR2E-201ENST00000215587 LRRIQ1Q96JM4 1722 aa25.76■■□□□ 1.71
POLR2E-201ENST00000215587 CDK13Q14004 1512 aaKnown RBP25.75■■□□□ 1.71
POLR2E-201ENST00000215587 ARID3CA6NKF2 412 aa25.73■■□□□ 1.71
POLR2E-201ENST00000215587 PPARGC1BQ86YN6 1023 aaKnown RBP25.73■■□□□ 1.71
POLR2E-201ENST00000215587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.7■■□□□ 1.7
POLR2E-201ENST00000215587 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.7
POLR2E-201ENST00000215587 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.7
POLR2E-201ENST00000215587 ILDR1Q86SU0 546 aaPredicted RBP25.69■■□□□ 1.7
POLR2E-201ENST00000215587 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
POLR2E-201ENST00000215587 MTUS2Q5JR59 1369 aa25.68■■□□□ 1.7
POLR2E-201ENST00000215587 ATP10BO94823 1461 aa25.67■■□□□ 1.7
POLR2E-201ENST00000215587 ADCY10Q96PN6 1610 aa25.67■■□□□ 1.7
POLR2E-201ENST00000215587 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
POLR2E-201ENST00000215587 EHBP1L1Q8N3D4 1523 aa25.65■■□□□ 1.7
POLR2E-201ENST00000215587 ABCC10Q5T3U5 1492 aa25.65■■□□□ 1.7
POLR2E-201ENST00000215587 KDM5BQ9UGL1 1544 aa25.63■■□□□ 1.69
POLR2E-201ENST00000215587 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
POLR2E-201ENST00000215587 FAM69CQ0P6D2 419 aa25.62■■□□□ 1.69
POLR2E-201ENST00000215587 ZCCHC11Q5TAX3 1644 aaKnown RBP25.59■■□□□ 1.69
POLR2E-201ENST00000215587 MAGI3Q5TCQ9 1506 aa25.59■■□□□ 1.69
POLR2E-201ENST00000215587 MAPKBP1O60336 1514 aa25.58■■□□□ 1.68
POLR2E-201ENST00000215587 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
POLR2E-201ENST00000215587 TROQ12816 1431 aaPredicted RBP25.56■■□□□ 1.68
POLR2E-201ENST00000215587 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
POLR2E-201ENST00000215587 DIP2BQ9P265 1576 aa25.55■■□□□ 1.68
POLR2E-201ENST00000215587 KDM6BO15054 1643 aa25.55■■□□□ 1.68
POLR2E-201ENST00000215587 SUPT6HQ7KZ85 1726 aaKnown RBP25.53■■□□□ 1.68
POLR2E-201ENST00000215587 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
POLR2E-201ENST00000215587 KIF14Q15058 1648 aa25.46■■□□□ 1.67
POLR2E-201ENST00000215587 WDR7Q9Y4E6 1490 aa25.43■■□□□ 1.66
POLR2E-201ENST00000215587 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
POLR2E-201ENST00000215587 ASXL2Q76L83 1435 aa25.42■■□□□ 1.66
POLR2E-201ENST00000215587 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
POLR2E-201ENST00000215587 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
POLR2E-201ENST00000215587 MYOM3Q5VTT5 1437 aa25.37■■□□□ 1.65
POLR2E-201ENST00000215587 TSPOAP1O95153 1857 aa25.35■■□□□ 1.65
POLR2E-201ENST00000215587 KCNH8Q96L42 1107 aa25.34■■□□□ 1.65
POLR2E-201ENST00000215587 RRBP1Q9P2E9 1410 aaKnown RBP25.32■■□□□ 1.64
POLR2E-201ENST00000215587 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
POLR2E-201ENST00000215587 ITSN2Q9NZM3 1697 aa25.3■■□□□ 1.64
POLR2E-201ENST00000215587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.64
POLR2E-201ENST00000215587 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
POLR2E-201ENST00000215587 MIA2Q96PC5 1412 aa25.27■■□□□ 1.64
POLR2E-201ENST00000215587 GPATCH8Q9UKJ3 1502 aaKnown RBP25.26■■□□□ 1.63
POLR2E-201ENST00000215587 ADGRL1O94910 1474 aa25.25■■□□□ 1.63
POLR2E-201ENST00000215587 ABCA9Q8IUA7 1624 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms