RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
ACTN1-201ENST00000193403 RAB3GAP2Q9H2M9 1393 aa15.59■□□□□ 0.09
ACTN1-201ENST00000193403 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
ACTN1-201ENST00000193403 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
ACTN1-201ENST00000193403 NBR1Q14596 966 aa15.54■□□□□ 0.08
ACTN1-201ENST00000193403 KIF21BO75037 1637 aa15.54■□□□□ 0.08
ACTN1-201ENST00000193403 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
ACTN1-201ENST00000193403 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
ACTN1-201ENST00000193403 NESP48681 1621 aa15.51■□□□□ 0.07
ACTN1-201ENST00000193403 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
ACTN1-201ENST00000193403 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
ACTN1-201ENST00000193403 B4GALNT3Q6L9W6 998 aa15.45■□□□□ 0.06
ACTN1-201ENST00000193403 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
ACTN1-201ENST00000193403 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
ACTN1-201ENST00000193403 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
ACTN1-201ENST00000193403 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
ACTN1-201ENST00000193403 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
ACTN1-201ENST00000193403 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-201ENST00000193403 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
ACTN1-201ENST00000193403 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-201ENST00000193403 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
ACTN1-201ENST00000193403 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
ACTN1-201ENST00000193403 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
ACTN1-201ENST00000193403 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
ACTN1-201ENST00000193403 MSH5O43196 834 aa15.36■□□□□ 0.05
ACTN1-201ENST00000193403 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
ACTN1-201ENST00000193403 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-201ENST00000193403 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
ACTN1-201ENST00000193403 RRBP1Q9P2E9 1410 aaKnown RBP15.31■□□□□ 0.04
ACTN1-201ENST00000193403 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
ACTN1-201ENST00000193403 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
ACTN1-201ENST00000193403 ANP32AP39687 249 aaKnown RBP15.29■□□□□ 0.04
ACTN1-201ENST00000193403 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
ACTN1-201ENST00000193403 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
ACTN1-201ENST00000193403 PHLDB1Q86UU1 1377 aa15.29■□□□□ 0.04
ACTN1-201ENST00000193403 CUX2O14529 1486 aa15.28■□□□□ 0.04
ACTN1-201ENST00000193403 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
ACTN1-201ENST00000193403 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■■■■ 48.9
ACTN1-201ENST00000193403 FOXD1Q16676 465 aa15.27■□□□□ 0.03
ACTN1-201ENST00000193403 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
ACTN1-201ENST00000193403 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-201ENST00000193403 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
ACTN1-201ENST00000193403 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
ACTN1-201ENST00000193403 RTN4Q9NQC3 1192 aaKnown RBP15.24■□□□□ 0.03
ACTN1-201ENST00000193403 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
ACTN1-201ENST00000193403 NOP58Q9Y2X3 529 aaKnown RBP15.22■□□□□ 0.03
ACTN1-201ENST00000193403 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
ACTN1-201ENST00000193403 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
ACTN1-201ENST00000193403 CCDC184Q52MB2 194 aa15.21■□□□□ 0.02
ACTN1-201ENST00000193403 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-201ENST00000193403 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-201ENST00000193403 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
ACTN1-201ENST00000193403 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
ACTN1-201ENST00000193403 MYT1LQ9UL68 1186 aa15.17■□□□□ 0.02
ACTN1-201ENST00000193403 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
ACTN1-201ENST00000193403 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
ACTN1-201ENST00000193403 CFTRP13569 1480 aa15.16■□□□□ 0.02
ACTN1-201ENST00000193403 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
ACTN1-201ENST00000193403 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
ACTN1-201ENST00000193403 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-201ENST00000193403 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
ACTN1-201ENST00000193403 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
ACTN1-201ENST00000193403 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
ACTN1-201ENST00000193403 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
ACTN1-201ENST00000193403 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-201ENST00000193403 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
ACTN1-201ENST00000193403 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
ACTN1-201ENST00000193403 IGF1RP08069 1367 aa15.1■□□□□ 0.01
ACTN1-201ENST00000193403 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
ACTN1-201ENST00000193403 PEG3Q9GZU2 1588 aa15.1■□□□□ 0.01
ACTN1-201ENST00000193403 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
ACTN1-201ENST00000193403 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
ACTN1-201ENST00000193403 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
ACTN1-201ENST00000193403 CUX1P39880 1505 aa15.08■□□□□ 0
ACTN1-201ENST00000193403 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 04e-7■■■■■ 30.8
ACTN1-201ENST00000193403 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
ACTN1-201ENST00000193403 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
ACTN1-201ENST00000193403 TIAM1Q13009 1591 aa15.03■□□□□ -0
ACTN1-201ENST00000193403 MPHOSPH9Q99550 1183 aa15.02□□□□□ -0.01
ACTN1-201ENST00000193403 NEFMP07197 916 aa15.01□□□□□ -0.01
ACTN1-201ENST00000193403 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
ACTN1-201ENST00000193403 C11orf95C9JLR9 678 aaPredicted RBP15□□□□□ -0.01
ACTN1-201ENST00000193403 ERICH6BQ5W0A0 696 aa14.99□□□□□ -0.01
ACTN1-201ENST00000193403 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-201ENST00000193403 IPO9Q96P70 1041 aaKnown RBP14.98□□□□□ -0.01
ACTN1-201ENST00000193403 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
ACTN1-201ENST00000193403 FGD6Q6ZV73 1430 aa14.97□□□□□ -0.01
ACTN1-201ENST00000193403 FMN1Q68DA7 1419 aa14.97□□□□□ -0.01
ACTN1-201ENST00000193403 AKNAQ7Z591 1439 aa14.97□□□□□ -0.01
ACTN1-201ENST00000193403 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-201ENST00000193403 UACAQ9BZF9 1416 aa14.95□□□□□ -0.02
ACTN1-201ENST00000193403 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
ACTN1-201ENST00000193403 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
ACTN1-201ENST00000193403 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-201ENST00000193403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.025e-7■□□□□ 10.3
ACTN1-201ENST00000193403 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-201ENST00000193403 CCDC7Q96M83 1385 aa14.92□□□□□ -0.02
ACTN1-201ENST00000193403 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
ACTN1-201ENST00000193403 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
ACTN1-201ENST00000193403 IL27Q8NEV9 243 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms