RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 EEA1Q15075 1411 aa14.01□□□□□ -0.17
CLDN18-201ENST00000183605 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
CLDN18-201ENST00000183605 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
CLDN18-201ENST00000183605 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
CLDN18-201ENST00000183605 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
CLDN18-201ENST00000183605 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
CLDN18-201ENST00000183605 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
CLDN18-201ENST00000183605 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
CLDN18-201ENST00000183605 CFTRP13569 1480 aa13.92□□□□□ -0.18
CLDN18-201ENST00000183605 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
CLDN18-201ENST00000183605 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
CLDN18-201ENST00000183605 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
CLDN18-201ENST00000183605 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
CLDN18-201ENST00000183605 CEP164Q9UPV0 1460 aa13.89□□□□□ -0.19
CLDN18-201ENST00000183605 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
CLDN18-201ENST00000183605 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
CLDN18-201ENST00000183605 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
CLDN18-201ENST00000183605 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
CLDN18-201ENST00000183605 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
CLDN18-201ENST00000183605 CCDC136Q96JN2 1154 aa13.85□□□□□ -0.19
CLDN18-201ENST00000183605 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
CLDN18-201ENST00000183605 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
CLDN18-201ENST00000183605 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
CLDN18-201ENST00000183605 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
CLDN18-201ENST00000183605 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
CLDN18-201ENST00000183605 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
CLDN18-201ENST00000183605 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
CLDN18-201ENST00000183605 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
CLDN18-201ENST00000183605 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
CLDN18-201ENST00000183605 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
CLDN18-201ENST00000183605 TONSLQ96HA7 1378 aa13.76□□□□□ -0.21
CLDN18-201ENST00000183605 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
CLDN18-201ENST00000183605 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
CLDN18-201ENST00000183605 NESP48681 1621 aa13.75□□□□□ -0.21
CLDN18-201ENST00000183605 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
CLDN18-201ENST00000183605 ERICH6BQ5W0A0 696 aa13.73□□□□□ -0.21
CLDN18-201ENST00000183605 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
CLDN18-201ENST00000183605 RAPGEF2Q9Y4G8 1499 aa13.71□□□□□ -0.22
CLDN18-201ENST00000183605 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
CLDN18-201ENST00000183605 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
CLDN18-201ENST00000183605 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
CLDN18-201ENST00000183605 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
CLDN18-201ENST00000183605 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
CLDN18-201ENST00000183605 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
CLDN18-201ENST00000183605 NEFMP07197 916 aa13.67□□□□□ -0.22
CLDN18-201ENST00000183605 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
CLDN18-201ENST00000183605 IPO9Q96P70 1041 aaKnown RBP13.66□□□□□ -0.22
CLDN18-201ENST00000183605 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
CLDN18-201ENST00000183605 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
CLDN18-201ENST00000183605 KIF21BO75037 1637 aa13.64□□□□□ -0.23
CLDN18-201ENST00000183605 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
CLDN18-201ENST00000183605 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
CLDN18-201ENST00000183605 FANCD2Q9BXW9 1451 aa13.63□□□□□ -0.23
CLDN18-201ENST00000183605 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
CLDN18-201ENST00000183605 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
CLDN18-201ENST00000183605 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
CLDN18-201ENST00000183605 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLDN18-201ENST00000183605 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
CLDN18-201ENST00000183605 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.24
CLDN18-201ENST00000183605 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
CLDN18-201ENST00000183605 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
CLDN18-201ENST00000183605 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
CLDN18-201ENST00000183605 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
CLDN18-201ENST00000183605 CCDC184Q52MB2 194 aa13.5□□□□□ -0.25
CLDN18-201ENST00000183605 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
CLDN18-201ENST00000183605 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
CLDN18-201ENST00000183605 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.25
CLDN18-201ENST00000183605 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.26
CLDN18-201ENST00000183605 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
CLDN18-201ENST00000183605 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
CLDN18-201ENST00000183605 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
CLDN18-201ENST00000183605 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
CLDN18-201ENST00000183605 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
CLDN18-201ENST00000183605 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
CLDN18-201ENST00000183605 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
CLDN18-201ENST00000183605 TMC1Q8TDI8 760 aa13.43□□□□□ -0.26
CLDN18-201ENST00000183605 CHIC2Q9UKJ5 165 aa13.42□□□□□ -0.26
CLDN18-201ENST00000183605 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
CLDN18-201ENST00000183605 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
CLDN18-201ENST00000183605 NUDCQ9Y266 331 aa13.41□□□□□ -0.26
CLDN18-201ENST00000183605 CHD1O14646 1710 aa13.4□□□□□ -0.26
CLDN18-201ENST00000183605 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
CLDN18-201ENST00000183605 GLIPR1L2Q4G1C9 344 aa13.39□□□□□ -0.27
CLDN18-201ENST00000183605 GSE1Q14687 1217 aa13.39□□□□□ -0.27
CLDN18-201ENST00000183605 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
CLDN18-201ENST00000183605 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
CLDN18-201ENST00000183605 PDE4AP27815 886 aa13.39□□□□□ -0.27
CLDN18-201ENST00000183605 CUX1P39880 1505 aa13.38□□□□□ -0.27
CLDN18-201ENST00000183605 DNAJC5Q9H3Z4 198 aa13.38□□□□□ -0.27
CLDN18-201ENST00000183605 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
CLDN18-201ENST00000183605 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
CLDN18-201ENST00000183605 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
CLDN18-201ENST00000183605 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
CLDN18-201ENST00000183605 ARXQ96QS3 562 aa13.37□□□□□ -0.27
CLDN18-201ENST00000183605 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
CLDN18-201ENST00000183605 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
CLDN18-201ENST00000183605 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
CLDN18-201ENST00000183605 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
CLDN18-201ENST00000183605 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
CLDN18-201ENST00000183605 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms