RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
MRPS35-201ENST00000081029 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
MRPS35-201ENST00000081029 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
MRPS35-201ENST00000081029 CYB5RLQ6IPT4 315 aa17.44■□□□□ 0.38
MRPS35-201ENST00000081029 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
MRPS35-201ENST00000081029 KIAA0586Q9BVV6 1533 aa17.39■□□□□ 0.37
MRPS35-201ENST00000081029 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
MRPS35-201ENST00000081029 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
MRPS35-201ENST00000081029 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
MRPS35-201ENST00000081029 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.37
MRPS35-201ENST00000081029 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
MRPS35-201ENST00000081029 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
MRPS35-201ENST00000081029 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
MRPS35-201ENST00000081029 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
MRPS35-201ENST00000081029 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
MRPS35-201ENST00000081029 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
MRPS35-201ENST00000081029 KIF21BO75037 1637 aa17.24■□□□□ 0.35
MRPS35-201ENST00000081029 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
MRPS35-201ENST00000081029 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
MRPS35-201ENST00000081029 PTPRGP23470 1445 aa17.18■□□□□ 0.34
MRPS35-201ENST00000081029 UGGT2Q9NYU1 1516 aa17.18■□□□□ 0.34
MRPS35-201ENST00000081029 DISP1Q96F81 1524 aa17.18■□□□□ 0.34
MRPS35-201ENST00000081029 TNIKQ9UKE5 1360 aa17.17■□□□□ 0.34
MRPS35-201ENST00000081029 KIAA0556O60303 1618 aa17.12■□□□□ 0.33
MRPS35-201ENST00000081029 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
MRPS35-201ENST00000081029 NPM1P06748 294 aaKnown RBP eCLIP17.11■□□□□ 0.33
MRPS35-201ENST00000081029 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
MRPS35-201ENST00000081029 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
MRPS35-201ENST00000081029 UACAQ9BZF9 1416 aa17.04■□□□□ 0.32
MRPS35-201ENST00000081029 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
MRPS35-201ENST00000081029 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
MRPS35-201ENST00000081029 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.31
MRPS35-201ENST00000081029 SAMD9Q5K651 1589 aa17.02■□□□□ 0.31
MRPS35-201ENST00000081029 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
MRPS35-201ENST00000081029 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
MRPS35-201ENST00000081029 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
MRPS35-201ENST00000081029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
MRPS35-201ENST00000081029 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
MRPS35-201ENST00000081029 ABCC2Q92887 1545 aa16.96■□□□□ 0.31
MRPS35-201ENST00000081029 UHRF1BP1LA0JNW5 1464 aa16.95■□□□□ 0.3
MRPS35-201ENST00000081029 CLIP1P30622 1438 aa16.94■□□□□ 0.3
MRPS35-201ENST00000081029 ABCA8O94911 1581 aa16.92■□□□□ 0.3
MRPS35-201ENST00000081029 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
MRPS35-201ENST00000081029 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
MRPS35-201ENST00000081029 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
MRPS35-201ENST00000081029 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
MRPS35-201ENST00000081029 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
MRPS35-201ENST00000081029 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
MRPS35-201ENST00000081029 KCNH8Q96L42 1107 aa16.87■□□□□ 0.29
MRPS35-201ENST00000081029 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
MRPS35-201ENST00000081029 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
MRPS35-201ENST00000081029 ATP10BO94823 1461 aa16.85■□□□□ 0.29
MRPS35-201ENST00000081029 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
MRPS35-201ENST00000081029 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
MRPS35-201ENST00000081029 PLEKHD1A6NEE1 506 aa16.8■□□□□ 0.28
MRPS35-201ENST00000081029 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
MRPS35-201ENST00000081029 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
MRPS35-201ENST00000081029 KIF13AQ9H1H9 1805 aa16.76■□□□□ 0.27
MRPS35-201ENST00000081029 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
MRPS35-201ENST00000081029 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
MRPS35-201ENST00000081029 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
MRPS35-201ENST00000081029 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
MRPS35-201ENST00000081029 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
MRPS35-201ENST00000081029 PCF11O94913 1555 aaKnown RBP16.73■□□□□ 0.27
MRPS35-201ENST00000081029 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
MRPS35-201ENST00000081029 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
MRPS35-201ENST00000081029 GLI2P10070 1586 aa16.66■□□□□ 0.26
MRPS35-201ENST00000081029 LRRIQ1Q96JM4 1722 aa16.66■□□□□ 0.26
MRPS35-201ENST00000081029 CD109Q6YHK3 1445 aa16.66■□□□□ 0.26
MRPS35-201ENST00000081029 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
MRPS35-201ENST00000081029 VPS8Q8N3P4 1428 aa16.65■□□□□ 0.26
MRPS35-201ENST00000081029 APLP2Q06481 763 aa16.61■□□□□ 0.25
MRPS35-201ENST00000081029 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
MRPS35-201ENST00000081029 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
MRPS35-201ENST00000081029 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.25
MRPS35-201ENST00000081029 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
MRPS35-201ENST00000081029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.244e-6■■□□□ 14.5
MRPS35-201ENST00000081029 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
MRPS35-201ENST00000081029 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
MRPS35-201ENST00000081029 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
MRPS35-201ENST00000081029 PPRC1Q5VV67 1664 aaKnown RBP16.55■□□□□ 0.24
MRPS35-201ENST00000081029 KIF14Q15058 1648 aa16.55■□□□□ 0.24
MRPS35-201ENST00000081029 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
MRPS35-201ENST00000081029 KANK4Q5T7N3 995 aaPredicted RBP16.52■□□□□ 0.23
MRPS35-201ENST00000081029 KDM6BO15054 1643 aa16.5■□□□□ 0.23
MRPS35-201ENST00000081029 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
MRPS35-201ENST00000081029 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
MRPS35-201ENST00000081029 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
MRPS35-201ENST00000081029 PLCH2O75038 1416 aa16.48■□□□□ 0.23
MRPS35-201ENST00000081029 FANCAO15360 1455 aa16.48■□□□□ 0.23
MRPS35-201ENST00000081029 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
MRPS35-201ENST00000081029 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
MRPS35-201ENST00000081029 CCNB3Q8WWL7 1395 aa16.46■□□□□ 0.23
MRPS35-201ENST00000081029 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
MRPS35-201ENST00000081029 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
MRPS35-201ENST00000081029 EHBP1L1Q8N3D4 1523 aa16.45■□□□□ 0.22
MRPS35-201ENST00000081029 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
MRPS35-201ENST00000081029 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
MRPS35-201ENST00000081029 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
MRPS35-201ENST00000081029 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms